Synthesis and preliminary biological evaluation of a new pyridocarbazole derivative covalently linked to a thymidine nucleoside as a potential targeted antitumoral agent. I

The therapy of human cancer is one of the more pursued goals by medicinal chemistry research. Most of the compounds clinically used as a treatment owe their efficacy to their cytotoxic interaction (direct or indirect) with nuclear DNA. This interaction results in the inhibition of DNA synthesis and the degradation of nucleic strands. Ellipticine is a naturally occurring 6H-pyrido[4,3-b]carbazole alkaloid endowed with antitumor activity, and several ellipticine derivatives have been used in clinical trials. We previously reported some 1,4-dimethyl-9H-carbazole derivatives structurally related to ellipticine. The purpose of our research was to transform the pyridocarbazole in a prodrug so that it would have more penetration in the tumor cells and block their replication. Our prodrug is slowly hydrolyzed in human plasma in the corresponding acid. From these preliminary results, we deduce that our compound can block cellular replication. Our hypothesis is that the antitumoral activity is probably related to the induction of damage to DNA, without cellular lysis in the short term.     

Chemoselective and stereoselective synthesis of gem-difluoro-β-aminoesters or gem-difluoro-β-lactams from ethylbromodifluoroacetate and imines during Reformatsky reaction

The chemoselective and stereoselective synthesis of gem-difluoro-β-aminoesters or gem-difluoro-β-lactams was investigated from ethylbromodifluoroacetate and imines during Reformatsky reaction. Influence of various reaction parameters, such as nature of the amine part, nature of the chiral auxiliary, was evaluated. High levels of stereoselectivity (up to 98%) were obtained for gem-difluoro-β-aminoesters and gem-difluoro-β-lactams using either (R)-phenylglycinol or (R)-methoxyphenylglycinol.     

Reaction du meta-diisopropyl-phenyllithium-chrometricarbonyle avec le monoxyde de carbone

The complex CpV(CO)₃THF has been prepared in THF solution (i) photochemically from CpV(CO)₄, and (ii) from [CpV(H)(CO)₃]^?/[Ph₃C]⁺ at low temperatures. THF is replaced by [CpV(H)(CO)₃]^? to form [{CpV(CO)₃}₂-μ-H]^?, and by various ligands L with C, η²-CC, Sn, N, O, S, Se or Te functionality to yield CpV(CO)₃L and cis-[CpV(CO)₂LL] (LL = bipy, o-phen, tolane). The δ (⁵¹V) values range over ca. 1400 ppm and allow the assignment of distinct coordination modes for ambidentate ligands. The temperature gradient is ca. +1.2 ppm/deg. For [CpV(SnCl₃)(CO)₃]^? (δ ?1340 ppm rel. to VOCl₃), ¹J(⁵¹V-^117,119Sn) is 900 Hz. The isotope effect on introducing ¹²CO for ¹³CO in CpV(CO)₄ is ?0.48(2) ppm; ¹J(⁵¹V-¹³C) 107 Hz.     

A convenient synthesis of new aminomethylenedioxypyrroloindoles via an iminium salt

Cyclization of 2-(1-pyrrolyl)piperonylcarboxamide derivatives gave iminium perchlorates which afforded 9-(N-substituted-imino) and 9-(N-substituted amino)-6,7-methylenedioxypyrrolo[1,2-a]indoles.     

MS Analysis and Molecular Characterization of Botrytis cinerea Protease Prot-2. Use in Bioactive Peptides Production

Prot-2 protease previously purified to homogeneity from Botrytis cinerea showed potentiality to be used in detergency and for production of bioactive peptides. To extend the characterization of Prot-2 protease, antifungal and antibacterial assays were performed in vitro using protein hydrolysates prepared from muscle of mackerel (Scomber scomborus) treated with this enzyme. The most active hydrolysate (degree of hydrolysis of 8 %) exhibited inhibition effect towards bacteria and phytopathogenic fungi, demonstrating that Prot-2 proteolysis generated bioactive peptides. Biochemical and molecular characterization of the purified Prot-2, by SDS-PAGE/Tryptic in gel-digestion and LC-MS/MS analysis, was investigated. The peptide amino acid sequence alignment search in database revealed a moderate homology between the determined amino acid sequence of Prot-2 protease and the known fungal trypsin/chymotrypsin in particular from Glomerella, Metarhizium and Streptomyces. From peptide sequence data obtained by mass spectrometry and sequences homologies, primers were defined and a cDNA fragment of 786 bp was amplified by RT-PCR. The cDNA nucleotide sequence analysis revealed an open reading frame coding for 262 amino acid residues. The deduced amino acid sequence of Prot-2 showed moderate identity with trypsin of Glomerella graminicola (74 %) and with chymotrypsin from Metarhizium anisopliae (71 %). Prot-2 exhibited a Ser protease homology and showed in addition the specific His motif of trypsin/chymotrypsin family.     

Three new monoterpene indole alkaloids from Psychotria umbellata Thonn.

Three new psychollatine-derived monoterpene indole alkaloids were obtained from Psychotria umbellata Thonn.: 3,4-Dehydro-18,19-β-epoxy-psychollatine (2), N⁴-[1-((R)-2-hydroxypropyl)]-psychollatine (3), and N⁴-[1-((S)-2-hydroxypropyl)]-psychollatine (4). Their structures were determined by ¹H and ¹³C NMR spectra, 2D correlations (COSY, HMQC, and HMBC), and mass and UV spectra. Compounds 3 and 4 were synthesized for structural confirmation and for the determination of the stereochemistry of the hydroxyl group.     

Molecular design based on 3D-pharmacophore. Application to 5-HT subtypes receptors

A first definition of a pharmacophore for the serotonin reuptake inhibitors was carried out by considering a three-dimensional model which correlates the chemical structures of series of reuptake inhibitors with their biological affinities. A molecular design was described by analyzing two different 3D serotonin pharmacophores. This successful approach enabled us to consider the design of new serotonin ligands by the same method.     

Solution-phase parallel synthesis of a 1140-member ureidothiophene carboxylic acid library

A 1140-library of thiophene ureidoacids was synthesized by the reaction of a set of 60 primary or secondary amines with a number of 19 thieno[3,2-d]- or thieno[2,3-d][1,3]oxazine-2,4-diones. All compounds were obtained by a simple solution-phase combinatorial strategy on a 200-400-mg scale with over 70% yields and purities over 80%. Sixty library members chosen at random were successfully characterized by standard 1H NMR, HPLC/MS, and IR studies. Analgesic, antalgic, and antiinflammatory potential were investigated. The 1140-member ureidothiophene carboxylic acid library will be used in high-throughput screening assays.     

Effects of the polydispersity on the viscoelasticity of low molecular weight polymers

The viscoelastic behavior of low molecular weight polymers exhibiting a fairly broad distribution has been deduced from the behavior of narrow samples by way of a linear law as a function of the density of the molecular weight distribution. Rheology of polydisperse linear polymers where the entire distribution of molecular weights is lower than 2 M _ehas been investigated using both binary mixtures and a broad sample of polystyrene. A decrease of the friction coefficient and of the viscosity compared to that of a narrow sample with the same M _w is observed. Therefore, the low components of broad samples play the role of plasticizers or lubricants which has been investigated in relation with the molecular weight distribution.     

Pivoting in Extended Rings for Computing Approximate Gr?bner Bases

It is well known that in the computation of Gr?bner bases arbitrarily small perturbations in the coefficients of polynomials may lead to a completely different staircase, even if the solutions of the polynomial system change continuously. This phenomenon is called artificial discontinuity in Kondratyev’s Ph.D. thesis. We show how such phenomenon may be detected and even “repaired” by using a new variable to rename the leading term each time we detect a “problem”. We call such strategy the TSV (Term Substitutions with Variables) strategy. For a zero-dimensional polynomial ideal, any monomial basis (containing 1) of the quotient ring can be found with the TSV strategy. Hence we can use TSV strategy to relax term order while keeping the framework of Gr?bner basis method so that we can use existing efficient algorithms (for instance the F ₅ algorithm) to compute an approximate Gr?bner basis. Our main algorithms, named TSVn and TSVh, can be used to repair artificial e{\epsilon}-discontinuities. Experiments show that these algorithms are effective for some nontrivial problems.