Chiral building blocks: enantioselective syntheses of benzyloxymethyl phenyl propionic acids

The synthesis of (2S)-2-benzyloxymethyl-3-(2-fluoro-4-methoxyphenyl)- propionic acid, (2S)-2-benzyloxymethyl-3-(2-fluoro-4-methylphenyl)propionic acid and (2S)-2-benzyl-oxymethyl-3-(2,4-dimethylphenyl)propionic acid has been achieved by TiCl4 mediated alkylation of the corresponding (4R)-4-benzyl-3-[3-(2-fluoro-4-methoxyphenyl-, 2-fluoro-4-methylphenyl-, 2,4- dimethylphenyl-)propionyl]-2-oxazolidinones, followed by hydrolysis of the chiral auxiliary. The stereochemistry of the alkylation reaction was confirmed by an X-ray crystal structure of (4R)-4-benzyl-3-[(2S)-2-benzyloxymethyl-3-(2- fluoro-4-methylphenyl)propionyl]-2-oxazolidinone.     

Microstructure evolution during tensile loading histories of a polyurea

The evolution in the hard/soft domain microstructure of an elastomeric‐like polyurea during different tensile loading histories was studied using in situ small‐ and wide‐angle X‐ray scattering (SAXS/WAXS). The nonlinear stress–strain behavior is initially stiff with a rollover yield to a more compliant response; unloading is highly nonlinear showing substantial hysteresis while also exhibiting significant recovery. Reloading reveals a substantially more compliant “softened” behavior and dramatically reduced hysteresis. WAXS peaks monitor characteristic dimensions of regular features within the hard domains; the peak location remains unchanged with tensile deformation indicating no separation of the internal structure within a domain, but the peak intensity becomes anisotropic with deformation evolving in a reversible manner consistent with orientation due to stretch. The SAXS profiles provide information between major hard domains. SAXS peaks are found to shift with tensile loading in a relatively affine manner up to a tensile true strain of ～0.4, which, using a Bragg reduction to aid interpretation, reveals an axial increase and a transverse decrease in interdomain spacings; this evolution is reversible for strains less than ～0.4. Increasing axial strain beyond a true strain of ～0.4 is accompanied by a dramatic, progressive, and irreversible reduction in axial Bragg spacing, indicating a breakdown in the hard domain aggregate network structure. A four‐point pattern is seen to develop during stretching. The breakdown in networked structure during a first load cycle gives a new structure for subsequent load cycles, which is seen to evolve in a reversible manner for strains less than or equal to the prior maximum strain. However, for strains exceeding the prior maximum strain excursion, additional breakdown is found. These SAXS results show that a breakdown in the hard domain aggregate network structure is a governing mechanism for the large dissipation (hysteresis) loops of the first load cycle and are also responsible for the softened reloading response. The absence of structure breakdown during subsequent load cycles corresponds to the substantially reduced hysteresis loops as well as the stable softened behavior. DMA data on pristine and previously deformed samples show a more compliant storage modulus in the predeformed sample, supporting the softened cyclic stress–strain data and the structural breakdown observed in the SAXS; the loss modulus was unchanged with deformation, which correlates with the lossy features measured in DMA with time‐dependent viscosity rather than losses due to structural breakdown. © 2011 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys, 2011     

Tunable microstructures and mechanical deformation in transparent poly(urethane urea)s

Transparent poly(urethane urea) (TPUU) materials offer an avenue to enable material designs with potential to achieve simultaneous enhancements in both physical and mechanical properties. To optimize the performance required for each application, the molecular features that influence the microstructure, the glass transition temperature (T_g), the deformation mechanisms, and the mechanical deformation behavior must be understood and exploited. In this work, a comprehensive materials characterization of select model PUUs with tunable microstructures is addressed. Increasing the hard segment (HS) content increases the stiffness and flow stress levels, whereas altering the soft segment (SS) molecular weight from 2000 to 1000 g/mol leads to an enhanced phase mixing with a SS T_g shifted ～17 °K toward higher temperatures as well as broadening of the SS relaxation closer to room temperature. As a result, the 1K TPUU materials display greater rate‐dependent stiffening and strain hardening on mechanical deformation over the broad range of strain rates covered in this work (10^?3 to 10⁴ s^?1). In such case of similar urea‐based HS content, the molar content of the urethane linkages, per stoichiometric requirements, is much higher in the 1K TPUUs than the 2K TPUUs. These additional urethane moieties lead to an increase in the extent of intermolecular interactions, via hydrogen bonding between the HS and the SS, providing not only further phase mixing and stronger rate sensitivity but also provide 1K TPUUs with drastically improved barrier properties. © 2010 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys, 2011     

Application of MRI to the analysis of speech production

Computer models of the process of speech articulation require a detailed knowledge of the vocal tract configurations employed in speech and the application of acoustic theory to calculate the sound waveform. Almost all currently available data on vocal tract dimensions come from x-ray films and are severely limited in quantity and coherence due to restrictions on radiation dosage and intersubject differences. We are using MRI techniques to obtain the pharyngeal dimensions of speakers producing sustained vowels. The fact that MRI does not employ ionizing radiation provides speech research with the opportunity to obtain comprehensive bodies of much-needed data on the articulatory characteristics of single subjects.     

Asymmetric,Stereodivergent Synthesis of (−)‐Clusianone Utilizing a Biomimetic Cationic Cyclization

We report a stereodivergent, asymmetric total synthesis of (−)‐clusianone in six steps from commercial materials. We implement a challenging cationic cyclization forging a bond between two sterically encumbered quaternary carbon atoms. Mechanistic studies point to the unique ability of formic acid to mediate the cyclization forming the clusianone framework.     

Mass spectrometric measurements of driver gas arrival in the T4 free-piston shock-tunnel

Available test time is an important issue for ground-based flow research, particularly for impulse facilities such as shock tunnels, where test times of the order of several ms are typical. The early contamination of the test flow by the driver gas in such tunnels restricts the test time. This paper reports measurements of the driver gas arrival time in the test section of the T4 free-piston shock-tunnel over the total enthalpy range 3–17 MJ/kg, using a time-of-flight mass spectrometer. The results confirm measurements made by previous investigators using a choked duct driver gas detector at these conditions, and extend the range of previous mass spectrometer measurements to that of 3–20 MJ/kg. Comparisons of the contamination behaviour of various piston-driven reflected shock tunnels are also made. PACS 07.75.th; 47.40.-x     

Chameleon Metals: Autonomous Nano-Texturing and Composition Inversion on Liquid Metals Surfaces

Studies on passivating oxides on liquid metals are challenging, in part, due to plasticity, entropic, and technological limitations. In alloys, compositional complexity in the passivating oxide(s) and underlying metal interface exacerbates these challenges. This nanoscale complexity, however, offers an opportunity to engineer the surface of the liquid metal under felicitous choice of processing conditions. We inferred that difference in reactivity, coupled with inherent interface ordering, presages exploitable order and selectivity to autonomously present compositionally biased oxides on the surface of these metals. Besides compositional differences, sequential release of biased (enriched) components, via fractal-like paths, allows for patterned layered surface structures. We, therefore, present a simple thermal-oxidative compositional inversion (TOCI) method to introduce fractal-like structures on the surface of these metals in a controlled (tier, composition, and structure) manner by exploiting underlying stochastic fracturing process. Using a ternary alloy, a three-tiered (in structure and composition) surface structure is demonstrated.     

Oxygen‐Promoted CH Bond Activation at Palladium

[Pd(P(Ar)(tBu)₂)₂] ( 1 , Ar=naphthyl) reacts with molecular oxygen to form Pd^II hydroxide dimers in which the naphthyl ring is cyclometalated and one equivalent of phosphine per palladium atom is released. This reaction involves the cleavage of both C? H and O? O bonds, two transformations central to catalytic aerobic oxidizations of hydrocarbons. Observations at low temperature suggest the initial formation of a superoxo complex, which then generates a peroxo complex prior to the C? H activation step. A transition state for energetically viable C? H activation across a Pd? peroxo bond was located computationally.     

ExplorEnz: a MySQL database of the IUBMB enzyme nomenclature

Background  

We describe the database ExplorEnz, which is the primary repository for EC numbers and enzyme data that are being curated on behalf of the IUBMB. The enzyme nomenclature is incorporated into many other resources, including the ExPASy-ENZYME, BRENDA and KEGG bioinformatics databases.     

EFFICIENCY OF PHOTOAFFINITY LABELING DNA HOMOPOLYMERS AND COPOLYMERS WITH ETHIDIUM MONOAZIDE *

Abstract— Photoaffinity labeling of synthetic DN As with ethidium monoazide was studied to determine if the efficiency of adduct formation was related to DNA sequence. Equilibrium drug binding to DNA homopolymers and copolymers was quanitified by phase partition techniques. The amount of drug bound to a deoxypolymer at equilibrium was then compared to the fraction of ethidium analog covalently-linked following photoactivation at the same drug/DNA input ratio. There were significant sequence-related differences in the ability of the photoaffinity probe to label DNA covalently. The efficiency of covalent-adduct formation decreased in the order poly(dG-dC)^. poly(dG-dC)> poly-(dG). poly(dC)poly(dA-dT). poly(dA-dT)poly(dA). poly(dT). Ethidium monoazide was about 2-fold more efficient in labeling deoxyhomopolymers and deoxycopolymers composed of G-C pairs than the A-T base counterparts. In low ionic buffers (0.015 M Na⁺), the efficiency of photoactivation decreased with increasing ethidium monoazide concentrations. However. the base sequence effect was observed over a 40-fold range of drug concentrations. Therefore, the amount of ethidium monoazide bound to a DNA site after irradiation does not appear to represent the true affinity of the drug for that site.