A selective intramolecular 5-exo-dig or 6-endo-dig cyclization en route to 2-furanone or 2-pyrone containing tricyclic scaffolds

Ringfused bicyclic 2-pyridones exhibit interesting biological properties against pili assembly in uropathogenic Escherichia coli (Pinkner, J. S. et al. Proc. Natl. Acad. Sci. U. S. A.2006, 103, 17897-17902; ?berg, V. et al. Org. Biomol. Chem.2007, 5, 1827-1834) as well as curli formation (Cegelski, L. et al. Nat. Chem. Biol.2009, 5, 913-919). In the search for new ring-fused central fragments, highly selective synthetic routes to the 2-furanone or 2-pyrone containing tricyclic scaffolds 1 and 2 have been developed.     

Identification of the sex pheromone of the lesser date moth, Batrachedra amydraula, using sequential SPME auto-sampling

The identification of the sex pheromone of the lesser date moth, Batrachedra amydraula (Meyrick) was based on GC-MS analysis of volatiles released by virgin females using sequential SPME auto-sampling of headspace and by synthesis of the key component, (4Z,7Z)-4,7-decadien-1-yl acetate. Substantial capture of males in a date palm plantation using a bait consisting of the key component and 5Z-decen-1-yl acetate in a ratio of 1:2 indicated that these are the essential components of the sex pheromone. Addition of 4Z-decen-1-yl acetate and decan-1-yl acetate, which were also identified, did not affect trap-capture. The lesser date moth is the first member of the Batrachedridae whose sex pheromone has been identified. (4Z,7Z)-4,7-Decadien-1-yl acetate is a novel compound among moth sex pheromones.     

Visualization of β‐carotene and starch granules in plant cells using CARS and SHG microscopy

Information on the content and bioavailability of provitamin A carotenoids, such as β‐carotene, in plant foods is of great interest due to the widespread vitamin A deficiency in developing countries. While the amount of β‐carotene can readily be quantified with analytical techniques, there is limited information on β‐carotene morphology in native plant materials. Here, we introduce nonlinear microscopy for three‐dimensional, label‐free imaging of carotenoids in fresh and thermally treated plant tissues, providing quantitative information at single‐aggregate level and detailed insight into their distribution. Carotenoids in orange‐fleshed sweet potato (OFSP), carrot, and mango were visualized by coherent anti‐Stokes Raman scattering (CARS) microscopy and, in the case of OFSP, related to the plant‐matrix morphology by simultaneous second‐harmonic generation (SHG) microscopy of starch granules. Sizes, shapes, densities, and location of different types of carotenoid bodies were quantified. While OFSP and carrot showed heterogeneous rod‐shaped bodies with high carotenoid densities indicated by higher CARS signals, the carotenoid‐filled lipid droplets in mango appeared as homogeneous low‐density aggregates of rounded shape. In addition, β‐carotene densities and morphologies in OFSP were studied after thermal processing, showing that the bodies remain intact despite significant changes of the surrounding starch granules. Copyright © 2010 John Wiley & Sons, Ltd.     

Laser-induced fluorescence of formaldehyde in combustion using third harmonic Nd:YAG laser excitation

Formaldehyde (CH2O) is an important intermediate species in combustion processes and it can through laser-induced fluorescence measurements be used for instantaneous flame front detection. The present study has focussed on the use of the third harmonic of a Nd:YAG laser at 355 nm as excitation wavelength for formaldehyde, and different dimethyl ether (C2H6O) flames were used as sources of formaldehyde in the experiments. The investigations included studies of the overlap between the laser profile and the absorption lines of formaldehyde, saturation effects and the potential occurrence of laser-induced photochemistry. The technique was applied for detection of formaldehyde in an internal combustion engine operated both as a spark ignition engine and as a homogenous charge compression ignition engine.     

Soot sublimation studies in a premixed flat flame using laser-induced incandescence (LII) and elastic light scattering (ELS)

Laser-induced incandescence (LII) as a diagnostic technique is based on rapid heating of soot particles to temperatures of several thousand Kelvin and subsequent detection of the thermal radiation from the laser-heated particles. At such high temperatures, soot sublimation effects must be considered when estimating uncertainties in LII measurements. In this work we have investigated the use of various laser fluences in LII using a Nd:YAG laser at 1,064 nm. Using another Nd:YAG laser at 532 nm, the elastic light scattering (ELS) signal from soot particles heated by the 1,064-nm laser was monitored. This approach makes it possible to determine at which fluence of the LII laser soot sublimation starts to become visible as a decrease in the ELS signal. By performing the measurements at various heights in a premixed sooting flat ethylene/air flame, the fluence threshold above which the ELS signal decreased was found to be higher at the lower flame heights corresponding to younger, smaller and less aggregated particles. The results from this work indicate that the different fluence thresholds for sublimation may be explained by a lower absorption function E(m) for the younger soot particles.     

Data processing for image-based chemical sensors: unsupervised region of interest selection and background noise compensation

Natural olfaction suggests that numerous replicas of small sensors can achieve large sensitivity. This concept of sensor redundancy can be exploited by use of optical chemical sensors whose use of image sensors enables the simultaneous measurement of several spatially distributed indicators. Digital image sensors split the framed scene into hundreds of thousands of pixels each corresponding to a portion of the sensing layer. The signal from each pixel can be regarded as an independent sensor, which leads to a highly redundant sensor array. Such redundancy can eventually be exploited to increase the signal-to-noise ratio. In this paper we report an algorithm for reduction of the noise of pixel signals. For this purpose, the algorithm processes the output of groups of pixels whose signals share the same time behavior, as is the case for signals related to the same indicator. To define these groups of pixels, unsupervised clustering, based on classification of the indicator colors, is proposed here. This approach to signal processing is tested in experiments on the chemical sensitivity of replicas of eight indicators spotted on to a plastic substrate. Results show that the groups of pixels can be defined independently of the geometrical arrangement of the sensing spots, and substantial improvement of the signal-to-noise ratio is obtained, enabling the detection of volatile compounds at any location on the distributed sensing layer.     

Design and synthesis of fluorescent pilicides and curlicides: bioactive tools to study bacterial virulence mechanisms

Pilicides and curlicides are compounds that block the formation of the virulence factors pili and curli, respectively. To facilitate studies of the interaction between these compounds and the pili and curli assembly systems, fluorescent pilicides and curlicides have been synthesized. This was achieved by using a strategy based on structure-activity knowledge, in which key pilicide and curlicide substituents on the ring-fused dihydrothiazolo 2-pyridone central fragment were replaced by fluorophores. Several of the resulting fluorescent compounds had improved activities as measured in pili- and curli-dependent biofilm assays. We created fluorescent pilicides and curlicides by introducing coumarin and 4,4-difluoro-4-bora-3a,4a-diaza-s-indacene (BODIPY) fluorophores at two positions on the peptidomimetic pilicide and curlicide central fragment. Fluorescence images of the uropathogenic Escherichia coli (UPEC) strain UTI89 grown in the presence of these compounds shows that the compounds are strongly associated with the bacteria with a heterogeneous distribution.     

Alpha scattering by heavy nuclei

We develop an approximation scheme to calculate the Glauber amplitude for elastic and inelastic alpha-nucleus scattering. It is rapidly converging and works for any nuclear density. The α-particle density is assumed Gaussian.