Aminoglycoside Antibiotics: New Insights into the Biosynthetic Machinery of Old Drugs

2‐Deoxystreptamine (2DOS) is the unique chemically stable aminocyclitol scaffold of clinically important aminoglycoside antibiotics such as neomycin, kanamycin, and gentamicin, which are produced by Actinomycetes. The 2DOS core can be decorated with various deoxyaminosugars to make structurally diverse pseudo‐oligosaccharides. After the discovery of biosynthetic gene clusters for 2DOS‐containing aminoglycoside antibiotics, the function of each biosynthetic enzyme has been extensively elucidated. The common biosynthetic intermediates 2DOS, paromamine and ribostamycin are constructed by conserved enzymes encoded in the gene clusters. The biosynthetic intermediates are then converted to characteristic architectures by unique enzymes encoded in each biosynthetic gene cluster. In this Personal Account, we summarize both common biosynthetic pathways and the pathways used for structural diversification.

     

Simultaneous anomalous reflection and quartz-crystal microbalance measurements of protein bindings on a gold surface

Protein bindings onto a gold surface were detected simultaneously by QCM (delta F(water)) and anomalous reflection (deltaR) of gold on the same surface in aqueous solutions; the obtained delta F(water)/deltaR values correlated with surface areas and viscosity of proteins.     

Geometrical Form Factor Improvement for Receiving System of Infrared Lidar

Improvement of an infrared light detection and ranging (IR-lidar) system for a short range (0–1000 m) and with high resolution is studied to enhance a geometrical form factor. Theoretical modeling of Mie scattering echo signals agrees with the experimental results. Introduction of a lens in front of the detector is effective for increasing the geometrical form factor, and a significant improvement in the received signal intensity is achieved, especially for short-range measurements around 100 m. This is useful for the IR-lidar system with a detector diameter of less than 1 mm. In the theoretical model, a ray-tracing technique was applied and a transmitting laser beam with Gaussian profile was considered for better accuracy.     

Separation of carrier free95mTc from niobium targets irradiated with alpha-particles

A^95mTc tracer with an excellent quality was prepared by a simple sublimation method after α-bombardment of niobium metal. Technetium-95m produced by the⁹³Nb(α,2n)^95mTc reaction was separated from the niobium targets in a quartz tube by heating at 1100°C in an oxygen gas flow. Technetium-95m sublimed as an oxide was deposited on the inner wall of the quartz tube outside an electric furnace, and then collected as a pertechnetate solution by washing with water. The ICP-MS analysis of the^95mTc solution revealed its excellent quality, compared to a^95mTc solution prepared from the same targets through a wet chemical separation method and a commercial^95mTc solution. With this tracer, the precision of ICP-MS analysis of⁹⁹Tc in environmental samples are highly improved.     

Two deformation paths in fission of light actinides

The correlation among the fission threshold energy, the scission configuration and the mass yield distribution has been studied in proton-induced fission of light actinides. It was found that there exist at least two fission paths from the threshold region to the scission. The elongated scission configuration is related with the fission process that goes over a higher threshold energy and results in a symmetric mass division mode, while the compact scission configuration with the process that experiences a lower threshold and ends up with an asymmetric mass division mode.     

Selective formation of thecis isomer of the nitridotechnetium(V) complex with 2,2′:6′,2″-terpyridine

The reaction of [TcNCl₂(PPh₃)₂] with 2,2′:6′,2″-terpyridine producedcis-[TcNCl₂(terpy)] selectively. The resulting complexes were characterized by¹H NMR and IR spectroscopy. The geometries of thecis andtrans isomers were estimated by theoretical calculations following a density functional method. Thecis isomer is likely more stable than thetrans one with respect to thetrans influence of the nitrido ligand. Furthermore, the behavior of nitridotechnetium complexes in polar solvents was compared to Os-analogues.     

Evaluation and comparison of three novel microbubbles: Enhancement of ultrasound-induced cell death and free radicals production

Three novel lipid-shell-type microbubbles (MBs), AS-0100, BG6356A and BG6356B, have been evaluated for their impact on ultrasound (US)-induced cell death and free radicals production. Previously studied and well-characterized US exposure conditions were employed in which human myelomonocytic lymphoma U937 cells were exposed to 1 MHz pulsed US beam (0.3 W/cm², 10% duty factor) for 1 min with or without MBs. Three different concentrations of each MB were used. Apoptosis and cell lysis were assessed by examining phosphatidylserine externalization and by counting viable cells, respectively, 6 h post-exposure. Free radicals production and scavenging activities were evaluated using electron paramagnetic resonance (EPR)-spin trapping. The results showed that only AS-0100 and BG6356A were able to enhance the US-induced apoptosis, mainly by increasing the secondary necrosis. Apoptosis and cell lysis seemed to depend more on mechanical forces exerted by oscillating MBs while free radicals played a trivial role. BG series MBs exhibited pronounced scavenging activities. Generally, despite the need for further optimization, AS-0100 and BG6356A appear to be promising as adjuncts in cases where US-induced cell death is required.     

Ion-beam irradiation effects on polyimide-UV–vis and infrared spectroscopic study

Ion-beam irradiation effects on polyimide, Kapton™, were studied with respect to optical and electronic properties. Stack films of Kapton™ (12.5 μm thick) were irradiated to various ion beams in air or vacuo at room temperature and subjected to ultraviolet–visible (UV–vis) spectroscopy, and change in absorbance and energy gap is discussed. The UV–vis absorption spectrum, which is assigned to the transition of electrons in benzene rings from π to π* orbital, upon He²⁺ (6 MeV/u) irradiation in air, shifted towards longer wavelength direction for all cases, and the shift was more obvious for higher linear energy transfer (LET) ion beams. The energy gap of the transition was estimated, and the H⁺ and He²⁺ ion beams caused little change in the transition energy gap Eg, while the heavier ions such as C⁶⁺ and Si¹⁴⁺ caused more significant decrease. This decrease is assumed to the structural changes around benzene rings, and the infrared spectroscopy revealed breakage in imide groups next to benzene ring in the repeating unit of polyimide.     

Synthesis of collagen-like sequential polypeptides containing O-phospho-L-hydroxyproline and preparation of electrospun composite fibers for possible dental application

A synthetic route is described for collagen-like polypeptides constructed from O-phospho-L-hydroxyproline [Hyp(PO(3)H(2))] residues. Using the synthetic polypeptides and a natural protein, gelatin, fine fibers and their network structures (ESNWs) were prepared via electrospinning. The composite ESNWs can induce the mineralization of calcium phosphate. The phosphoryl groups of the Hyp(PO(3)H(2)) residues affect both the crystalline phase and amount of the calcium phosphate, depending on the chemical structure in the repeating sequence. The composite ESNWs can be developed as a biocompatible replacement of the extracellular matrix of hard tissues, and thus can be applied as dental materials for restoration of dental cavities or as a sealant for pits and fissures.     

A flow-based enzyme-linked immunosorbent assay on a polydimethylsiloxane microchip for the rapid determination of immunoglobulin A

A flow-based enzyme-linked immunosorbent assay (ELISA) on a polydimethylsiloxane (PDMS) microchip has been developed for the rapid determination of immunoglobulin A (IgA). The analytical principle of this integrated method is the same as the conventional sandwich-type ELISA. A primary antibody (anti-IgA) was adsorbed on the surface of a PDMS microchannel, and then an antigen (IgA) and a secondary antibody (anti-IgA HRP labeled) were reacted successively. The resulting antigen-antibody complex, fixed on the surface of the microchannel, was detected using Amplex^® Red and a fluorescent imaging system. The calibration curve of the IgA standard solution was linear in the range of 0-50 ng/mL at the flow rate of 10 μL/min. This flow rate corresponds to the reaction time of 4.8 s. Compared to the conventional assay on a 96-well microtiter plate, the present assay on the microchip dramatically shortened the reaction time necessary for the enzyme-substrate reaction from 30 min to 4.8 s, i.e., to 1/375. The amounts of the reagent and sample were also reduced to 1/100 compared to the 96-well microtiter plate.