The photon-ion merged-beams experiment PIPE at PETRA III—The first five years

The Photon-Ion Spectrometer at PETRA III—in short, PIPE—is a permanently installed user facility at the "Variable Polarization XUV Beamline" P04 of the synchrotron light source PETRA III operated by DESY in Hamburg, Germany. The careful design of the PIPE ion-optics in combination with the record-high photon flux at P04 has lead to a breakthrough in experimental studies of photon interactions with ionized small quantum systems. This short review provides an overview over the published scientific results from photon-ion merged-beams experiments at PIPE that were obtained since the start of P04 operations in 2013. The topics covered comprise photoionization of ions of astrophysical relevance, quantitative studies of multi-electron processes upon inner-shell photoexcitation and photoionization of negative and positive atomic ions, precision spectroscopy of photoionization resonances, photoionization and photofragmentation of molecular ions, and of endohedral fullerene ions.     

Unsymmetrical indirect covariance processing of hyphenated and long‐range heteronuclear 2D NMR spectra ‐ Enhanced visualization of 2JCH and 4JCH correlation responses

Recent reports have demonstrated the unsymmetrical indirect covariance combination of discretely acquired 2D NMR experiments into spectra that provide an alternative means of accessing the information content of these spectra. The method can be thought of as being analogous to the Fourier transform conversion of time domain data into the more readily interpreted frequency domain. Hyphenated 2D‐NMR spectra such as GHSQC‐TOCSY, when available, provide an investigator with the means of sorting proton‐proton homonuclear connectivity networks as a function of the ¹³C chemical shift of the carbon directly bound to the proton from which propagation begins. Long‐range heteronuclear chemical shift correlation experiments establish proton‐carbon correlations via heteronuclear coupling pathways, most commonly across three bonds (³J_CH), but in more general terms across two (²J_CH) to four bonds (⁴J_CH). In many instances ³J_CH correlations dominate GHMBC spectra. We demonstrate in this report the improved visualization of ²J_CH and ⁴J_CH correlations through the unsymmetrical indirect covariance processing of GHSQC‐TOCSY and GHMBC 2D spectra.     

Phoenix mars mission—The thermal evolved gas analyzer

The Phoenix spacecraft that was launched to Mars in August 2007 landed safely on the Martian northern arctic region on May 25, 2008. It carried six experiments to study the history of water on the planet and search for organic molecules in the icy subsurface Martian soil. The spacecraft is a lander with an arm and scoop designed to dig a trench though the top soil to reach an expected ice layer near the surface. One of the instruments on board is the thermal evolved gas analyzer (TEGA), which consists of two components, a set of eight very small ovens that will heat samples of the ice soil mixtures from the trench to release imbedded gases and mineral decomposition products, and a mass spectrometer that serves as the analysis tool for the evolved gases, and also for measurements of the composition and isotopic ratios of the gases that comprise the atmosphere of Mars. The mass spectrometer is a miniature magnetic sector instrument controlled by microprocessor-driven power supplies. One feature is the gas enrichment cell that will increase the partial pressures of the noble gases in an atmosphere sample by removing all the active gases, carbon dioxide, and nitrogen, to improve the accuracy of their isotopic ratio measurements.     

Ultrafast spectroscopy of the uranium(IV) and thorium(IV) bis(ketimide) complexes (C5Me5)2An[-N=C(Ph)(CH2Ph)]2 (An = Th, U)

Ultrafast pump-probe spectroscopic studies have been performed on (C 5Me 5) 2U[- N=C(Ph)(CH 2Ph)] 2 and (C 5Me 5) 2Th[- N=C(Ph)(CH 2Ph)] 2 including, for the uranium complex, the first direct measurement of dynamics of electronic deactivation within a 5f-electron manifold. Evidence has been found for strong coupling between the electronic ground state and the f-electron manifold which dominates the dynamics of the excited states of the bis(ketimide) uranium complex. These also demonstrate strong singlet-f manifold coupling, which assists in the deactivation of the photoexcited state of the uranium complex, and provide information on intersystem crossing and internal conversion processes in both complexes.     

Travelling wave ion mobility mass spectrometry studies of protein structure: biological significance and comparison with X-ray crystallography and nuclear magnetic resonance spectroscopy measurements

The three-dimensional conformation of a protein is central to its biological function. The characterisation of aspects of three-dimensional protein structure by mass spectrometry is an area of much interest as the gas-phase conformation, in many instances, can be related to that of the solution phase. Travelling wave ion mobility mass spectrometry (TWIMS) was used to investigate the biological significance of gas-phase protein structure. Protein standards were analysed by TWIMS under denaturing and near-physiological solvent conditions and cross-sections estimated for the charge states observed. Estimates of collision cross-sections were obtained with reference to known standards with published cross-sections. Estimated cross-sections were compared with values from published X-ray crystallography and nuclear magnetic resonance (NMR) spectroscopy structures. The cross-section measured by ion mobility mass spectrometry varies with charge state, allowing the unfolding transition of proteins in the gas phase to be studied. Cross-sections estimated experimentally for proteins studied, for charge states most indicative of native structure, are in good agreement with measurements calculated from published X-ray and NMR structures. The relative stability of gas-phase structures has been investigated, for the proteins studied, based on their change in cross-section with increase in charge. These results illustrate that the TWIMS approach can provide data on three-dimensional protein structures of biological relevance.     

Novel software for the assignment of peaks from tandem mass spectrometry spectra of synthetic polymers

Novel software has been developed to aid the interpretation of tandem mass spectrometry (MS/MS) data from synthetic polymers. The software is particularly focused toward aiding the end-group determination of these materials by significantly speeding up the interpretation process. This allows information on the initiator and/or chain transfer agents, used to generate the polymer, and the mechanism of termination to be inferred from the data much more rapidly. The software allows the validity of hypothesized structures to be rapidly tested by automatically annotating the data file using previously proposed fragmentation rules for synthetic polymers. Low-energy collision-induced dissociation (CID) data from methacrylate, styrene, and polyether oligomers are used as example data for the software. Exact-mass CID information was used to aid the understanding of the dissociation mechanism of the polymers. The software can use exact-mass data to provide more confidence in the results. The MS/MS results indicate that the fragmentation pathways are those previously proposed for these polymers.     

Sorption kinetics of uranium-238 and neptunium-237 on a glacial sediment

Studies of uptake of radionuclides by natural materials have shown that sorption may occur via fast equilibrium exchange and/or slow kinetic processes, which can be described using a series of box models. This paper describes the use of such models to evaluate the solid-solution partitioning of ²³⁸U and ²³⁷Np on a clay rich sediment. Experimental data are obtained using the batch sorption technique, which are then analysed using 1, 2, and 3 box kinetic models. Uptake of ²³⁸U is initially rapid, with approximately 90% sorbed within the first 30 minutes. Sorption continues, but at a slower rate. Uptake of ²³⁷Np is initially slower than U, with approximately 30% sorbed within the first 30 minutes. Sorption again continues, at a slower rate. Analysis of the experimental data indicates that sorption can be described using 2 and 3 box kinetic models. The results demonstrate that sorption of uranium and neptunium on clay rich sediments occurs via equilibrium and kinetically controlled pathways, with neptunium being controlled by kinetics to a greater extent than uranium. The 2 or 3 box model can describe sorption of neptunium, uranium requires the 3 box model.     

An application of Tutte’s Theorem to 1-factorization of regular graphs of high degree

A well known conjecture in graph theory states that every regular graph of even order 2n and degree λ(2n), where λ≥1/2, is 1-factorizable. Chetwynd and Hilton [A.G. Chetwynd, A.J.W. Hilton, 1-factorizing regular graphs of high degree — An improved bound, Discrete Math. 75 (1989) 103-112] and, independently, Niessen and Volkmann [T. Niessen, L. Volkmann, Class 1 conditions depending on the minimum degree and the number of vertices of maximum degree, J. Graph Theory (2) 14 (1990) 225-246] proved the above conjecture under the assumption that . Since these results were published no significant or even partial improvement has been made in terms of lowering the bound on λ. We shall obtain here a partial improvement on λ. Specifically, using the original Chetwynd-Hilton approach and Tutte’s 1-Factor Theorem, we show that the above bound can be improved to , apart (possibly) from two families of exceptional cases. We then show, under the stronger assumption that λ≥λ^∗≈0.785, that one of the two families of exceptional cases cannot occur.     

List multicolorings of graphs with measurable sets

In an ordinary list multicoloring of a graph, the vertices are “colored” with subsets of pre‐assigned finite sets (called “lists”) in such a way that adjacent vertices are colored with disjoint sets. Here we consider the analog of such colorings in which the lists are measurable sets from an arbitrary atomless, semifinite measure space, and the color sets are to have prescribed measures rather than prescribed cardinalities. We adapt a proof technique of Bollobás and Varopoulos to prove an analog of one of the major theorems about ordinary list multicolorings, a generalization and extension of Hall's marriage theorem, due to Cropper, Gyárfás, and Lehel. © 2006 Wiley Periodicals, Inc. J Graph Theory 54: 179–193, 2007