The use of semiempirical energy partitioning terms in the study of through space (homoaromatic) interactions

MNDO and AMI calculations, including configuration interactions, were performed on cycloheptatriene (2), 1,6-methano[10]annulene (3), and the tautomeric elassovalenes (4), (5), and (6). The goal of this study is to examine these systems and assess indicators of the importance of through space (homoaromatic) interactions. It is established that the two-center energy partitioning terms are capable of detecting favorable (negative two-center term) through space interactions. In cases of cyclic conjugation (homoconjugation), it is also shown that the inclusion of CI is necessary.     

The mass spectra of small-ring hetero-cycles—II. Aziridinones (α-lactams)

The mass spectra of six aziridinones (α-lactams) are presented. The six aziridinones exhibit the same general fragmentation pattern, the primary processes being loss of the N-t-butyl group, loss of carbon monoxide and loss of t-butyl isocyanate. Several additional rearrangement or fragmentation processes are observed with specific α-lactams.     

Geometry and force constant determination from correlated wave functions for polyatomic molecules: Ground states of H2O and CH2

Ab initio calculations including electron correlation are reported for the water and methylene molecules as a function of geometry. A large contracted gaussian basis set is used and the multiconfiguration wave functions, optimized by the iterative natural orbital procedure, include 277 and 617 configurations for H₂O and CH₂ respectively. The method of selecting configurations, yielding first-order wave functions, is discussed in some detail. For H₂O, the SCF geometry is r=0,942 Å, =105,8°, the correlated result is r=0,968 Å, =103,2°, and the experimental r=0,957 Å, =104,5°. The water stretching force constants, in millidynes/Å, are 8,72 (SCF), 8,75 (CI), and 8,4 (experiment). Bending force constants are 0,88 (SCF), 0,83 (CI), and 0,76 (experiment). For methylene the SCF geometry is r=1,072 Å, =129,5°, while the result from first-order wave functions is r=1,088 Å, =134°. The predicted CH₂ force constants are 6,16 (SCF) and 6,13 (CI) for stretching and 0,44 (SCF) and 0,33 (CI) for bending.

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Zusammenfassung Es wird über ab intito-Rechnungen mit Berücksichtigung der Elektronenkorrelation berichtet, die an Wasser- und Methylenmolekülen als Funktion der Geometrie durchgeführt worden sind. Dazu benutzt man einen großen kontrahierten Gauß-Basissatz. Die Multikonfigurationswellenfunktionen, die unter Benutzung von natürlichen Orbitalen nach der iterativen Prozedur optimiert werden, enthalten für H₂O 277 Konfigurationen und für CH₂ 617. Die Auswahlmethode, die zu Wellenfunktionen 1. Ordnung führt, wird diskutiert. Im Falle des Wassers erhält man die SCF-Geometrie zu r=0,942 Å, =105,8°, das korrelierte Resultat ist: r=0,968 Å, =103,2° und das experimentelle r=0,957 Å, =104,5°. Für Wasser ergeben sich die Valenzkraftkonstanten (in Millidyn Å^–1) 8,72 (SCF), 8,75 (CI) und 8,4 (Experiment). Die Deformationskonstanten sind 0,88 (SCF), 0,83 (CI) und 0,76 (Experiment). Im Falle des Methylens ist die SCF-Geometrie r=1,072 Å, =129,5°, während man mit Wellenfunktionen 1. Ordnung r=1,088 Å und =134° erhält. Die CH₂-Kraftkonstanten werden für die Valenzschwingung zu 6,16 (SCF) und 6,13 (CI) bzw. für die Deformationsschwingung zu 0,44 (SCF) und 0,33 (CI) vorausgesagt.

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Work performed under the auspices of the U.S. Atomic Energy Commision.

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Supported by the grants from the Research Corporation and the University of California Committee on Research.     

Development of a systems analysis approach for resolving the structure of biodegrading soil systems

An experimental and mathematical method is developed for the microbial systems analysis of polyaromatic hydrocarbon (PAH)-degrading mixed cultures in PAH-contaminated “town gas” soil systems. Frequency response is the primary experimental and data analysis tool used to probe the structure of these complicated systems. The objective is to provide a fundamental protocol for evaluating the performance of specific mixed microbial cultures on specific soil systems by elucidating the salient system variables and their interactions. Two well-described reactor systems, a constant volume stirred tank reactor (CSTR) and a plug flow differential volume reactor, are used in order to remove performance effects that are related to reactor type as opposed to system structure. These two reactor systems are well-defined systems that can be described mathematically and represent the two extremes of one potentially important system variable, macroscopic mass transfer. The experimental and mathematical structure of the protocol is described, experimental data is presented, and data analysis is demonstrated for the stripping, sorption, and biodegradation of napththalene.     

A double-twist Möbius-aromatic conformation of [14]annulene

[structure: see text] B3LYP and KMLYP/6-31G(d) calculations predict a double-helical and chiral conformation of [14]annulene with the topological properties of a double-twist M?bius band as highly aromatic; its energy with respect to the known Hückel-aromatic conformation is predicted to be stabilized by suitable ring substitution.     

Colorimetric determination of osmium (VI) with 1-naphthylamine-3,5,7-trisulfonic acid

An investigation has been made of the organic compound, 1-naphthylamine-3,5,7-trisulfonic acid, for use as a colorimetric reagent for the determination of trace quantities of osniiun(Vl). When this compound is added to an osmium (OsO₄^-2) solution, a violet colored organo-osmium complex is formed which has highest sensitivity at wavelength 560 mμ. The complex reaches maximum color intensity after four hours. The solution should be brought to pH 1.5 and maintained at tins pH with a buffer, after maximum color development. The colored complex conforms to Beer's law over an osmium concentration range of 0 to 6 p.p.m. Its absorbance is not affected by either excess reagent (up to a 7 : 1 ratio) or by temperature variation over the range 15° to 35° C. Many metallic ions interfere with the color reaction and hence require a separation, of osmium from these ions.The nature of the complex in solution was studied by the following three methods: (1) mole ratio, (2) continuous variations and (3) slope ratio. All three methods indicate a ratio of reagent to osmium of 2 to 1.A procedure for the colorimetric determination of osmium(VI) has been developed; it has a sensitivity of 1 part osmium in 15,000,000 parts of solution, with good precision.     

The low-lying electronic excited states of NiCO

Highly correlated coupled cluster methods with single and double excitations (CSSD) and CCSD with perturbative triple excitations were used to predict molecular structures and harmonic vibrational frequencies for the electronic ground state X 1Sigma+, and for the 3Delta, 3Sigma+, 3Phi, 1 3Pi, 2 3Pi, 1Sigma+, 1Delta, and 1Pi excited states of NiCO. The X 1Sigma+ ground state's geometry is for the first time compared with the recently determined experimental structure. The adiabatic excitation energies, vertical excitation energies, and dissociation energies of these excited states are predicted. The importance of pi and sigma bonding for the Ni-C bond is discussed based on the structures of excited states.     

A chemical inhibitor reveals the role of Raf kinase inhibitor protein in cell migration

Raf kinase inhibitor protein (RKIP) is a modulator of cell signaling that functions as an endogenous inhibitor of multiple kinases. We demonstrate here a positive role for RKIP in the regulation of cell locomotion. We discovered that RKIP is the relevant cellular target of locostatin, a cell migration inhibitor. Locostatin abrogates RKIP's ability to bind and inhibit Raf-1 kinase, and it acts by disrupting a protein-protein interaction, an uncommon mode of action for a small molecule. Small interfering RNA-mediated silencing of RKIP expression also reduces cell migration rate. Overexpression of RKIP converts epithelial cells to a highly migratory fibroblast-like phenotype, with dramatic reduction in the sensitivity of cells to locostatin. RKIP is therefore the compound's valid target and a key regulator of cell motility.     

Intermolecular perturbation of CH-stretching diagonal local-mode anharmonicity in 3-methylpentane

CH-stretching overtone spectra of 3-methylpentane are measured for both liquid and low temperature (77 K) solid phases. A local-mode analysis is used to extract the diagonal local-mode anharmonicity constant. The results show that the local vibrational potential is more harmonic at high viscosity.     

Directed evolution of the dioxygenase complex for the synthesis of furanone flavor compounds

Herein we report a new preparation of 4-hydroxy-2,5-dimethyl-2,3-dihydrofuran-3-one, the flavor compound strawberry furanone, based on a ‘green’ approach with a minimum number of steps. The first step is an enzymatic dioxygenation of p-xylene to form cyclohexadiene-cis-diol, followed by ring opening via ozonolysis, and ring closure to form the furanone. In efforts to improve the efficiency of the enzymatic step, a directed evolution approach was taken to increase the substrate specificity and selectivity of the toluene dioxygenase enzyme system.