Unnatural proteins for the control of surface forces

We introduce a new method for the stabilization of colloidal particles via the synthesis and adsorption of unnatural proteins. Biosynthesis of protein-based polymers offers the advantages of preparation of complex sequences through control of the primary sequence, monodisperse polymers, ease of combinatorial search for anchor blocks, environmentally friendly synthesis, use of water as the solvent, and incorporation of a palette of known natural proteins. We have synthesized an unnatural protein with the sequence thioredoxin-Pro(39)Glu(10) for modification of the forces between alumina particles. The polyglutamate sequence, Glu(10), is anionic (pH > 3) and is designed to anchor the protein to positively charged solids, e.g. alumina in water (pH < 9). The polyproline sequence, Pro(39), is neutral. The thioredoxin is a recombinant form of the natural globular protein with a histidine patch (His-patch-thioredoxin) and is zwitterionic. The combined thioredoxin-Pro(39) sequence is hydrophilic with pI approximately 6.3. This block is designed to remain in solution, thereby providing a steric barrier to the approach of two particles in a range of salt and pH conditions. Ellipsometry experiments show that thioredoxin-Pro(39)Glu(10) does adsorb to alumina. Force measurements with the atomic force microscopy (AFM) colloid probe technique show that adsorption of thioredoxin-Pro(39)Glu(10) leads to repulsive forces that decay exponentially with the separation between the surfaces and are independent of salt concentration in the range 0.001-0.1 M KNO(3). This demonstrates that the repulsive forces are not electrostatic. We hypothesize that the repulsion is due to confinement and loss of solvent for the adsorbed polymer; the forces are similar to those expected for a polymer brush. Force measurements between thioredoxin-coated alumina surfaces also show a repulsive force, but the force has a decay length that is consistent with electrostatic double-layer forces: the thioredoxin has not neutralized the surface charge of the underlying alumina. Our results point to interesting future experiments where recombinant DNA technology could be used to synthesize fusion proteins containing useful natural proteins and an anchor. This may allow preparation, via single-step aqueous self-assembly, of anchored proteins that maintain their natural structure. Our technique is not limited to homopolymer blocks; more complex primary sequences can be used.     

Li+ cation coordination in [Li2(CF3SO3)2(diglyme)] and [Li3(C2F3O2)3(diglyme)]

The title compounds, poly­[[[bis(2‐methoxy­ethyl) ether]­lithium(I)]‐di‐μ₃‐tri­fluoro­methanesulfonato‐lithium(I)], [Li₂(CF₃SO₃)₂(C₆H₁₄O₃)]_n, and poly­[[[bis(2‐methoxy­ethyl) ether]­lithium(I)]‐di‐μ₃‐tri­fluoro­acetato‐dilithium(I)‐μ₃‐tri­fluoro­acetato], [Li₃(C₂F₃O₂)₃(C₆H₁₄O₃)]_n, consist of one‐dimensional polymer chains. Both structures contain five‐coordinate Li⁺ cations coordinated by a tridentate diglyme [bis(2‐methoxy­ethyl) ether] mol­ecule and two O atoms, each from separate anions. In both structures, the [Li(diglyme)X₂]^? (X is CF₃SO₃ or CF₃CO₂) fragments are further connected by other Li⁺ cations and anions, creating one‐dimensional chains. These connecting Li⁺ cations are coordinated by four separate anions in both compounds. The CF₃SO₃^? and CF₃CO₂^? anions, however, adopt different forms of cation coordination, resulting in differences in the connectivity of the structures and solvate stoichiometries.     

THE VALIDATION OF A NEW VASCULAR DAMAGE ASSAY FOR PHOTODYNAMIC THERAPY AGENTS

Abstract— The therapeutic effect of photodynamic therapy (PDT: photodynamic sensitizer + light) is partly due to vascular damage. This report describes a new vascular photodamage assay for PDT agents and a validation of the assay. The method described here quantitates changes in tissue blood perfusion based on the relative amount of injected fluorescein dye in treated and untreated tissues. A specially designed fluorometer uses chopped monochromatic light from an argon laser as a source for exciting fluorescein fluorescence. The fluorescent light emitted from the tissue is collected by a six element fiberoptic array, filtered and delivered to a photodiode detector coupled to a phase-locked amplifier for conversion to a voltage signal for recording. This arrangement permits a rather simple, inexpensive construction and allows for the simultaneous use of the argon laser by other investigators.
The routine assay for characterizing a specific photosensitizer at a standard dose consists of the sequential allocation of eight mice to a set of different light doses designed to span the dose-response range of fluorescein fluorescence exclusion (measured 8–10 min after fluorescein injection). The assay validation experiment used an anionic photosensitizer, 2-[l-hexyloxyethyl]-2-devinyl pyropheophorbide-a at a dose of 0.4 μmol/kg. The parameter estimates (n = 34 mice) from fitting the standard Hill dose-response model to the data were: median fluorescence exclusion light dose FE₅₀= 275 ± 8.3 J/cm² and Hill sigmoidicity parameter m =−3.66 ± 0.28. Subsets of the full data set randomly selected to simulate a standard eight mice experiment yielded similar parameter estimates. The new assay provides reliable estimates of PDT vascular damage with a frugal sequential experimental design.     

Activation of the IL-10 gene promoter following photodynamic therapy of murine keratinocytes

Photodynamic therapy (PDT), an anticancer treatment modality, has recently been shown to be an effective treatment for several autoimmune disease models including antigen-induced arthritis. PDT was found to induce the expression of IL-10 messenger RNA (mRNA) and protein in the skin, and this expression has similar kinetics to the appearance of PDT-induced suppression of skin-mediated immune responses such as the contract hypersensitivity (CHS) response. Some aspects of the UVB-induced suppression of the immune response have been linked to the induction of IL-10. IL-10 has been shown to inhibit the development and activation of Th1 cells, which are critical for many cell-mediated immune responses, including CHS. We have examined the effect of PDT and UVB irradiation on the activity of the IL-10 gene promoter and on IL-10 mRNA stability using the murine keratinocyte line, PAM 212. In vitro PDT induces IL-10 mRNA and protein expression from PAM 212 cells, which can be correlated with an increase in AP-1 DNA binding activity and activation of the IL-10 gene promoter by PDT. Deletion of an AP-1 response element from the IL-10 gene promoter was shown to abrogate the PDT-induced promoter activity indicating that the AP-1 response element is critical to IL-10 induction by PDT. In addition, PDT results in an increase in IL-10 mRNA stability, which may also contribute to the increased IL-10 expression in PAM 212 cells following PDT. In vitro UVB irradiation also results in activation of the IL-10 promoter. However, in contrast to PDT, UVB-induced activation of the IL-10 promoter is not AP-1 dependent and did not increase IL-10 mRNA stability.     

Selective photocleavage of DNA and RNA by anthraquinone derivatives: targeting the single-strand region of hairpin structures

A tetracationic anthraquinone derivative (27AQS2) binds to hairpin DNA and RNA. Ultraviolet irradiation of the bound quinone causes cleavage in the loop region of both oligonucleotides and at guanines in the stem region of the DNA hairpin. The absence of observable strand cleavage at guanines in the RNA hairpin suggests that either aniline treatment does not cause cleavage at damaged guanines in RNA or that radical cation migration does not occur readily in RNA duplexes. The ability to target the single-stranded regions of DNA and RNA structures is an important property of this photonuclease.     

Molecular-dynamics simulation of the effect of ions on a liquid-liquid interface for a partially miscible mixture

Molecular-dynamics simulations were performed to model the effect of added salt ions on the liquid-liquid interface in a partially miscible system. Simulations of the interface between saturated phases of a model 1-hexanol+water system show a bilayer structure of 1-hexanol molecules at the interface with -OH heads of the first layer directed into the water phase and the opposite orientation for the second layer. The alignment of the polar -OH groups at the interface stabilizes a charge separation of sodium and chloride ions when salt is introduced into the aqueous phase, producing an electrical double layer. Chloride ions aggregate nearer the interface and sodium ions move toward the bulk water phase, consistent with the explanation that the -OH alignment presents a region of partial positive charges to which the hydrated chloride atoms are attracted. Ions near the interface were found to be less solvated than those in the bulk phase. An electric field was also applied to drive ions through the interface. Ions crossing the interface tended to shed water molecules as they entered the hexanol bilayer, leaving a trail of water molecules. Stabilization and facilitated transport of the ion by interactions with the second layer of hexanol molecules appeared to be an important step in the mechanism of sodium ion transport.     

Highly correlated particle densities and idempotent one-densities

The problem of determining idempotent one-densities which integrate to the exact or to a highly correlated particle density is considered. A method for obtaining the minimum energy idempotent one-density integrating to a given correlated particle density within a finite basis is described. The implications of this are twofold. First, Hartree–Fock accuracy can be exceeded in describing the electron density with an idempotent one-density; this is particularly relevant to the problem of constructing orbitals from experimental x-ray scattering data. Second, electron densities from analytic CI or MCSCF wave functions can be made available in a form as compact as the Hartree–Fock density by reporting the orbitals which define the correlated density via an idempotent one-density. A numerical example of the new method is given in which an accurate correlated density for He is “fitted” by an idempotent one-density represented in a finite (near Hartree–Fock) basis. Considering the deficiencies of the basis for this purpose, a technique is suggested for constructing basis sets optimized for prediction of one-electron properties rather than for energy.     

Ketone enolization with lithium dialkylamides: the effects of structure,solvation, and mixed aggregates with excess butyllithium

The effects of lithium dialkylamide structure, mixed aggregate formation, and solvation on the stereoselectivity of ketone enolization were examined. Of the lithium dialkylamides examined, lithium tetramethylpiperidide (LiTMP) in THF resulted in the best enolization selectivity. The stereoselectivity was further improved in the presence of a LiTMP-butyllithium mixed aggregate. The use of less polar solvents reduced the enolization stereoselectivity. Ab initio calculations predict LDA and LiTMP to form mixed cyclic dimers in ethereal solvents. The calculations also predict LiTMP-alkyllithium mixed aggregates to competitively inhibit the formation of less stereoselective LiTMP-lithium enolate mixed aggregates.     

Nonanalytic curvature contributions to solvation free energies: influence of drying

We investigate the solvation of a hard spherical cavity, of radius R, immersed in a fluid for which the interparticle forces are short ranged. For thermodynamic states lying close to the liquid binodal, where the chemical potential deviation deltamu is identical with mu-muco(T) is very small and positive, complete wetting by gas (drying) occurs and two regimes of interfacial behavior can be identified. These are characterized by the length scale Rc=2gamma(gl)infinity/(Deltarhodeltamu), where gamma(gl)infinity is the planar gas-liquid surface tension and Deltarho is the difference in coexisting densities at temperature T. For R>Rc, the interfacial free energy and the density profile of the fluid near the hard wall can be expanded in powers of the curvature R(-1), in keeping with the analysis of Stillinger and Cotter [J. Chem. Phys. 55, 3449 (1971)]. In the other regime, R0, of the work of formation of a hard spherical cavity and of the Gibbs adsorption and the fluid density at contact with the wall. Our analysis, which is based on an effective interfacial Hamiltonian combined with exact statistical mechanical sum rules, is confirmed fully by the results of microscopic density functional calculations for a square-well fluid. We discuss the repercussions of our results for solvation phenomena, emphasizing that nonanalytic behavior equivalent to that we find for complete drying in solvophobic systems will also arise in the case of complete wetting, i.e. when liquid films are adsorbed on the surface of large (colloidal) particles or at curved substrates. We reassess various results in the important but neglected Stillinger-Cotter paper, where drying was not considered explicitly, in the light of our present analysis.