Plasma density effects on atomic reaction rates

Plasma modeling and diagnostics commonly involve solution of rate equations for the population densities of impurity ions in their excited and charge states. Construction of the rate equations requires a complete set of atomic transition rates for all the charge and excited states involved. However, the rates are themselves affected by the host plasma ions and electrons. The ionic and electronic effects in a two-component plasma are intimately interconnected, especially when the rate equations are simplified for computational purpose in the determination of ionization balance. We formulate a coherent approach to the problem of the plasma density effect, and apply it to carbon impurities in a hydrogen plasma. Both the plasma field distortion of atomic states and the corresponding rates by the plasma ions and stochastic plasma collisional transitions caused by the plasma electrons are included. The latter effect is estimated by constructing an effective collisional transition operator, and the electron-ion recombination processes are explicitly evaluated. It is shown that, these two effects of the ionic field distortions and electronic collisions tend to cancel each other, resulting in many cases in reducing the overall effect of the plasma density on the ionization.     

Investigation of helium addition for laser-induced plasma spectroscopy of pure gas phase systems: Analyte interactions and signal enhancement

The role of helium addition on the analyte signal enhancement in laser-induced breakdown spectroscopy for analysis of pure gaseous systems was examined using carbon and hydrogen atomic emission lines. Increased analyte response, as measured by peak-to-base and signal-to-noise ratios, was observed with increasing helium addition, with maximum enhancement approaching a factor of 7. Additional measurements revealed a significant decrease in plasma electron density with increasing helium addition. To explore the mechanisms of analyte signal enhancement, the helium emission lines were also examined and found to be effectively quenched with nitrogen addition. In consideration of the data, it is concluded that the role of metastable helium is not as important as the overall changes in plasma properties, namely electron density and laser-plasma coupling. Helium addition is concluded to affect the electron density via Penning ionization, as well as to play a role in the initial plasma breakdown processes.     

Synthesis of pyrene and benzo[a]pyrene adducts at the exocyclic amino groups of 2'-deoxyadenosine and 2'-deoxyguanosine by a palladium-mediated C-N bond-formation strategy

Single-electron oxidation of the carcinogenic hydrocarbon benzo[a]pyrene (BaP) is thought to result in a radical cation intermediate and this species has been proposed to cause alkylation at the nitrogens of the purine nucleobases. Although several different nucleoside adducts have been isolated as arising from this mode of metabolic activation, there are no selective, total syntheses of the stable exocyclic amino group adducts formed by the single-electron oxidation of any hydrocarbon with the purine 2'-deoxynucleosides to date. In this paper we disclose the synthesis of the model adducts N(6)-(1-pyrenyl)-2'-deoxyadenosine and N(2)-(1-pyrenyl)-2'-deoxyguanosine as well as the first synthesis of the carcinogen-linked nucleoside derivatives N(6)-(6-benzo[a]pyrenyl)-2'-deoxyadenosine and N(2)-(6-benzo[a]pyrenyl)-2'-deoxyguanosine via a palladium-mediated C-N bond formation. Two different coupling strategies were attempted: coupling of an aryl bromide with a suitably protected nucleoside and the coupling of an arylamine with a suitable halonucleoside. The former had somewhat limited applicability in that only N(6)-(1-pyrenyl)-2'-deoxyadenosine was prepared by this method; on the other hand, the latter was more general. However, there are noteworthy differences in the amination reactions at the C-6 and C-2 positions. Reactions at the C-6 resulted in the competing formation of a 1:2 amine-nucleoside adduct in addition to the desired monoaryl nucleoside. Such a dimer formation was not observed at the C-2. The C-2 adducts, however, displayed an interesting conformational behavior.     

Oxidation of Methanol on Pt,Pt–Ru,and Pt–Ru–Mo Electrocatalysts Dispersed in Polyaniline: An in situ Infrared Reflectance Spectroscopy Study

The electrochemical oxidation of methanol was investigated on a Pt–Ru–Mo catalyst with an in situ infrared reflectance spectroscopy. The electrocatalysts were prepared by an electrochemical deposition and dispersed in a conducting three-dimensional matrix of polyaniline (PAni). We observed that CO₂ is produced from methanol oxidation at 350 mV vs. RHE on PAni/Pt–Ru–Mo, which is 100 mV less negative than on PAni/Pt–Ru and 200 mV less than on PAni/Pt. The results suggest that Pt–Ru–Mo is less sensitive to CO_ADS poisoning than Pt–Ru and much more sensitive than Pt. Large differences are observed concerning the average wavenumber of _ADS between Pt–Ru–Mo, Pt–Ru, and Pt.     

Beiträge zur Chemie des Phosphors. 167 [1, 2]. Konstitutions- und Konfigurationsisomere von Pentaphosphan(7), P5H7

Contributions to the Chemistry of Phosphorus. 167. Constitutional and Configurational Isomers of Pentaphosphane(7), P₅H₇ Phosphane mixtures containing 10—15 P-% of pentaphosphane(7), P₅H₇, are obtained by thermolysis of diphosphane, P₂H₄, or as residue from distillation of crude diphosphane [3]. According to the complete analysis of the ³¹P{¹H}-NMR spectrum on the basis of selective population transfer experiments, P₅H₇ exists as a mixture of three diastereomers of n-P₅H₇ — 1a (erythro, erythro), 1b (erythro, threo), 1c (threo, threo) — and of the constitutional isomer 2-phosphinotetraphosphane 2 (iso-P₅H₇, largest relative isomeric abundance). The correlation between the diastereomers and the observed spin systems results from the preferred gauche orientation of neighboring free electron pairs, the dependence of ¹J(PP) on dihedral angles, and the ³J(PP) long range couplings. From the ³¹P-NMR data of the phosphane molecules P_nH_n+2 with n = 1—5 general relationships for the δ(³¹P) values and the ¹J(PP) coupling constants of chain-type phosphorus hydrides as a function of their structural parameters are derived.     

Alkynylxenon(II) fluorides

Alkynylxenon(II) fluorides, RCC(triple bond)XeF, have been prepared from the reactions of the corresponding trimethyl(alkynyl)silanes, Me3(-)SiC(triple bond)CR, and XeF2 in the presence of [NMe4F in common organic solvents at low temperature. The existence of the linear unit C(triple bond)C-Xe-F was proved for PhC(triple bond)CXeF by the 19F-13C NMR correlation method using the HMBC pulse sequence.     

Optical properties of human prostate at 732 nm measured in mediated photodynamic therapy

Characterization of the tissue light penetration in prostate photodynamic therapy (PDT) is important to plan the arrangement and weighting of light sources so that sufficient light fluence is delivered to the treatment volume. The optical properties (absorption [mu(a)], transport scattering [mu(s)'] and effective attenuation [mu(eff)] coefficients) of 13 patients with locally recurrent prostate cancer were measured in situ using interstitial isotropic detectors. Measurements were made at 732 nm before and after motexafin lutetium (MLu)-mediated PDT in four quadrants. Optical properties were derived by applying the diffusion theory to the fluence rates measured at several distances (0.5-5 cm) from a point source. mu(a) and mu(s)' varied between 0.07 and 1.62 cm(-1) (mean 0.37 +/- 0.24 cm(-1)) and 1.1 and 44 cm(-1) (mean 14 +/- 11 cm(-1)), respectively. mu(a) was proportional to the concentration of MLu measured by an ex vivo fluorescence assay. We have observed, on average, a reduction of the MLu concentration after PDT, presumably due to the PDT consumption of MLu. mu(eff) varied between 0.91 and 6.7 cm(-1) (mean 2.9 +/- 0.7 cm(-1)), corresponding to an optical penetration depth (delta = 1/micro(eff)) of 0.1-1.1 cm (mean 0.4 +/- 0.1 cm). The mean penetration depth at 732 nm in human prostate is at least two times smaller than that found in normal canine prostates, which can be explained by a four times increase of the mean value of mu(s)' in human prostates. The mean light fluence rate per unit source strength at 0.5 cm from a point source was 1.5 +/- 1.1 cm(-2), excluding situations when bleeding occurs. The total number of measurements was N = 121 for all mean quantities listed above. This study showed significant inter- and intraprostatic differences in the optical properties, suggesting that a real-time dosimetry measurement and feedback system for monitoring light fluences during treatment should be considered for future PDT studies.     

Potentiometric titration of milligram quantities of uranium in the presence of iron

A method is described for the potentiometric titration of milligram quantities of the uranium(IV) ion in the presence of iron. This is accomplished by complexing the iron with 1.10-phcnanthroline. The uranium can then be titrated with standard ceric sulfate without interference from the iron.     

Solvent-sensitive dyes to report protein conformational changes in living cells

Covalent attachment of solvent-sensitive fluorescent dyes to proteins is a powerful tool for studying protein conformational changes, ligand binding, or posttranslational modifications. We report here new merocyanine dyes that make possible the quantitation of such protein activities in individual living cells. The quantum yield of the new dyes is sharply dependent on solvent polarity or viscosity, enabling them to report changes in their protein environment. This is combined with other stringent requirements needed in a live cell imaging dye, including appropriate photophysical properties (excitation >590 nm, high fluorescence quantum yield, high extinction coefficient), good photostability, minimal aggregation in water, and excellent water solubility. The dyes were derivatized with iodoacetamide and succinimidyl ester side chains for site-selective covalent attachment to proteins. A novel biosensor of Cdc42 activation made with one of the new dyes showed a 3-fold increase in fluorescence intensity in response to GTP-binding by Cdc42. The dyes reported here should be useful in the preparation of live cell biosensors for a diverse range of protein activities.     

Proton affinity of β-oxalylaminoalanine (BOAA): Incorporation of direct entropy correction into the single-reference kinetic method

A new version of the single-reference-extended kinetic method is presented in which direct entropy correction is incorporated. Results of calibration experiments with the monodentate base pyridine and the bidentate base ethylenediamine are presented for which the method provides proton affinities in excellent agreement with published values and reasonable predictions for the protonation entropies. The method is then used to determine the proton affinity and protonation entropy of the non-protein amino acid beta-oxalylaminoalanine (BOAA). The PA of BOAA is found to be 933.1 +/- 7.8 kJ/mol and a prediction for the protonation entropy of -39 J mol(-1) K(-1) is also obtained, indicating a significant degree of intramolecular hydrogen bonding in the protonated form. These results are supported by hybrid density functional theory calculations at the B3LYP/6-311++G**//B3LYP/6-31+G* level. They indicate that the preferred site of protonation is the alpha-nitrogen atom (PA = 935.0 kJ/mol) and that protonated BOAA has a strong hydrogen bond between the hydrogen on the alpha-amino group and one of the carbonyl oxygen atoms on the side chain.