Unexpected open-chain molecular structure of a titanocenyl-substituted dimethyl ether

Reaction of (η-C₅H₄CH₃)₂TiCl₂ with CH₃OCH₂MgCl yielded (η-C₅H₄-CH₃)₂Ti(Cl)CH₂OCH₃ (2a). Complex 2a crystallizes in space group P2₁/n with cell constants a 8.162(1), b 11.004(2), c 15.297(2) Å, β 96.40(1)°. In contrast to the three-membered metallacyclic zirconium compound of analogous composition (η-C₅H₅)₂Zr(Cl)CH₂OCH₃ (1), the titanocenyl-substituted ether 2a has an open-chain (η¹-O“-outside”) type structure.     

Zur entmischung der Lösungsmittel bei der chromatographischen trennung—v: Sorption von fliessmitteldämpfen an cellulose

The sorption of solvent vapours onto dried cellulose has been investigated. The time-dependence and the effect of the solvent-water ratio is discussed. The studies concerned the properties of methanol, ethanol, propanol and butanol.     

Elektronenstruktur,Spektren und Magnetismus von Chinon-π-Komplexen des Nickels

Zusammenfassung Die Elektronenstrukturen von Bis-durochinon-nickel(0) und der Komplexe vom Typ Olefin-Ni(0)-Chinon werden im Rahmen der LCAO-MO-Näherung diskutiert und zur Deutung der Absorptionsspektren herangezogen. Den im freien Durochmon auftretenden Übergängen lassen sich in den Komplexspektren jeweils nur wenig verschobene Banden zuordnen. Darüber hinaus wird eine intensive Charge-Transfer-Bande beobachtet, die einem Übergang vom höchsten besetzten Nickelzustand zum tiefsten unbesetzten Chinon-Orbital entspricht. Aus der Intensität der Bande, die im freien Chinon dem b _3g 2b ₂ g-Übergang zugeordnet wird, ergibt sich für das gelöste Bis-durochinon-nickel(0)-Molekül die Symmetrie D _2h . Während die Komplexe mit Durochinon in Übereinstimmung mit der Theorie diamagnetisch sind, weisen die analogen Verbindungen der Dimethylchinone magnetische Momente von 1,52 bzw. 2,75 B. M. auf, woraus auf eine Mitbeteiligung polarer Strukturen am Grundzustand dieser Komplexe geschlossen wird.

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The electronic structures of bis-duroquinone-nickel(0) and complexes of the type olefine-Ni(0)-quinone are discussed in the MO-LCAO approximation and used for an interpretation of the absorption spectra. The transitions of the free duroquinone can be correlated with transitions of the complexes at nearly the same wavelengths. In addition, an intense charge transfer band is observed which corresponds to a transition from the highest occupied nickel orbital to the lowest unoccupied quinone orbital. From the intensity of the band which corresponds to b _3g 2b_2g in the free quinone, the symmetry D _2h for the dissolved bis-duroquinone-nickel(0) molecule is deduced. Whereas the duroquinone complexes are diamagnetic in agreement with theory, analogous compounds of the diméthylquinones exhibit magnetic momenta of 1.52 and 2.75 B. M. suggesting the participation of polar structures in the ground state of these complexes.

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Résumé Les structures électroniques du bis-duroquinone-nickel(0) et des complexes du type oléfine-Ni(0)-quinone sont discutées dans le cadre del'approximationMO-LCAO et utilisées pour l'interprétation des spectres d'absorption. Aux transitions de la duroquinone libre peuvent être attribuées des bandes peu déplacées dans les spectres des complexes. En outre on observe une bande intense correspondant à une transition de la plus haute orbitale occupée du nickel à la plus basse orbitale libre de la quinone. L'intensité de la bande nommée b _3g 2b _2g dans la quinone libre indique la symétrie D _2h pour la molécule dissoute du bis-duroquinone-nickel(0). Tandis que les complexes de la duroquinone sont diamagnétiques en accord avec la théorie, des composés analogues des diméthylquinones présentent des moments magnétiques de 1,52 et de 2,75 B. M. d'où l'on infère la participation de structures polaires à l'état fondamental de ces complexes.

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6. Mitteilung über Komplexe vom Typ des Bis-durochinon-nickel(0). 5. Mitt. vgl. [11].     

TreeDock: a tool for protein docking based on minimizing van der Waals energies

Predicting protein-protein and protein-ligand docking remains one of the challenging topics of structural biology. The main problems are (i) to reliably estimate the binding free energies of docked states, (ii) to enumerate possible docking orientations at a high resolution, and (iii) to consider mobility of the docking surfaces and structural rearrangements upon interaction. Here we present a novel algorithm, TreeDock, that addresses the enumeration problem in a rigid-body docking search. By representing molecules as multidimensional binary search trees and by exploring a sufficient number of docking orientations such that two chosen atoms, one from each molecule, are always in contact, TreeDock is able to explore all clash-free orientations at very fine resolution in a reasonable amount of time. Due to the speed of the program, many contact pairs can be examined to search partial or complete surface areas. The deterministic systematic search of TreeDock is in contrast to most other docking programs that use stochastic searches such as Monte Carlo or simulated annealing methods. At this point, we have used the Lennard-Jones potential as the only scoring function and show that this can predict the correct docked conformation for a number of protein-protein and protein-ligand complexes. The program is most powerful if some information is known about the location of binding faces from NMR chemical-shift perturbation studies, orientation information from residual dipolar coupling, or mutational screening. The approach has the potential to include docking-site mobility by performing molecular dynamics or other randomization methods of the docking site and docking families to families of structures. The performance of the algorithm is demonstrated by docking three complexes of immunoglobulin superfamily domains, CD2 to CD58, the V(alpha) domain of a T-cell receptor to its V(beta) domain, and a T-cell receptor to a pMHC complex as well as a small molecule inhibitor to a phosphatase.     

Synthese und Reaktionen von Bicyclo[6.4.0]dodecan-3-carbonsäure-Derivaten

Synthesis and Reactions of the Bicyclo[6.4.0]dodecane-3-carboxylic Acid Derivatives The synthesis and some consecutive reactions of the compounds 5-8 , derivatives of bicyclo[6.4.0]dodecane-3-carboxylic acid ( 1 ), are described. The esters 7 and 8 can be obtained by Baeyer-Villiger oxidation of 2-hydroxy-8-methyltricyclo[7.3.1.0^2,7]tridecan-13-one ( 4 ) and subsequent hydrolysis of the lactone 5 . The structure and configuration of these compounds has been evaluated by spectroscopic techniques (mainly 2D-NMR methods). The formation of 7 via 1,2-H shift and subsequent isomerization to 8 has been studied. The esters 11 and 13 are formed stereospecifically from 7 and 8 .     

Zur Lokalisierung funktioneller Gruppen mit Hilfe der Massenspektrometrie. XVII—Massenspektren von 3,6,20β-Trihydroxy-pregnanen

Mass spectra of 3,6,20β-trihydroxypregnanes differ greatly, depending upon the nature of the A/B ring fusion and the positions of the hydroxy groups. Of all the isomers only 3α,6β,20β-trihydroxy-5β-pregnane produces an intense, structurally significant, ion at m/e 263. For 3β,6α,20β-trihydroxy-5α-pregnane an ion of m/e 141 is typical.     

High performance liquid chromatographic separation of dipeptide and tripeptide enantiomers using a chiral crown ether stationary phase

A chiral stationary phase (CSP) based on (-)-(18-crown-6)-2,3,11,12-tetracarboxylic acid was evaluated for the direct resolution of the enantiomers of dipeptides and tripeptides. The type and concentration of the acid and the methanol content were optimized with regard to retention time and resolution using Ala-Phe as model peptide. A mobile phase consisting of 10 mM sulfuric acid in 70% aqueous methanol was applied to the separation of a set of 16 structurally diverse dipeptides and tripeptides. Generally, the configuration of the amino acid at the N-terminus determined the enantiomer elution order. With a few exceptions the LL- and LD-enantiomers interacted stronger with the CSP compared to the corresponding DD- or DL-enantiomers. The experimental conditions also allowed the simultaneous separation of all four stereoisomers of Ala-Phe. Addition of ammonium sulfate generally reduced retention times and enantiomer resolution. Addition of triethylamine as modifier led to an overall increase of the retention times while the resolution did not show a general trend, increasing in the case of Ala-Ala but decreasing in the case of Ala-Phe.     

On the synthesis of hypericin by oxidative trimethylemodin anthrone and emodin anthrone dimerization: Isohypericin

Summary The base catalyzed oxidative dimerization of emodin anthrone exclusively yields hypericin. However, on oxidative dimerization of trimethylemodinanthrone a mixture of hexamethylhypericin and hexamethylisohypericin was obtained. Chromatographic separation of the hexabenzoyl derivatives was achieved, and by saponification about equal amounts of hypericin and isohypericrin were produced. Isohypericin could be characterized for the first time by its spectroscopic data and its protonation and deprotonationpK _a andpK _a ^* values.

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Zur Synthese von Hypericin durch oxidative Dimerisierung von Trimethylemodinanthron und Emodinanthron: Isohypericin

Zusammenfassung Die basenkatalysierte oxidative Dimerisierung von Emodinanthron liefert ausschließlich Hypericin. Oxidative Dimerisierung von Trimethylemodinanthron ergibt jedoch ein Gemisch von Hexamethylhypericin und Hexamethylisohypericin. Die Hexabenzoylderivate wurden chromatographisch getrennt, und Hypericin und Isohypericin konnten aus diesen Derivaten durch Verseifung freigesetzt werden. Isohypercin konnte erstmals durch seine spektroskopischen Daten und seine Protonierungs- und Deprotonierungs-pK _aundpK _a ^* -Werte charakterisiert werden.

     

Permutation representations in molecular symmetry

The reducible representations of the point groups are generally studied because of their relevance to molecular orbital and vibration theory. Triple correlations within the polyhedra are described by group-theoretical invariants that are related to the permutation representations and termed polyhedral isoscalar factors. These invariants are applied in theorems on matrix elements referring to the symmetry-adapted bases at different centres. Further invariants or geometrical weight factors inter-relate different types of reduced matrix elements of irreducible tensors (generalization of the Wigner-Eckart theorem to the polycentric case). As a demonstration a complete tabulation is given for the point group C ₄.     

Development of a robust technique for sampling volatile metal(loid)s in wetlands

The formation of volatile organic and inorganic metals and metalloids in aquatic environments is a known, but not very intensively investigated, process. Several techniques have been developed over the past 10 years to determine these trace components. These techniques are of limited use in wetland environments, where samples have to be taken from the soil-water interface, and require an immediate sample analysis due to thermodynamic instabilities of the volatile metal(loid)s. This paper presents an innovative sampling technique for total concentrations of volatile metal(loid)s in wetlands, based on an in situ gas-water separation via a porous PTFE membrane and stabilising the volatile metal(loid)s in a liquid sorbent (NaOCl solution). Samples may thus be collected even at remote sites, where longer storage times have to be accounted for. The sampling system was tested by means of a laboratory facility simulating the generation of arsine and dimethyl arsine under abiotic conditions as well as under field conditions. Results for sampling efficiency, reproducibility, and long-term storage are presented. Application of the sampling system in the field is shown.