Cyclic sample pooling using two‐dimensional liquid chromatography system enhances coverage in shotgun proteomics

We report a cyclic sample pooling technique devised in two‐dimensional liquid chromatography–electrospray ionization mass spectrometry (LC‐ESI‐MS) shotgun proteomics that renders deeper proteome coverage; we combined low pH reversed‐phase (RP) LC in trifluoroacetic acid in the first dimension, followed by cyclic sample pooling of the eluate and low‐pH RP‐LC in formic acid in the second dimension. The new protocol has a significantly higher resolving power suitable for LC‐ESI‐MS/MS shotgun proteomics. Copyright © 2013 John Wiley & Sons, Ltd.     

Selective nucleophilic additions to poly(methacrylate)s containing isothiocyanate moieties in the side chains and their application in cross‐linking

Reactivity of isothiocynate moieties in the side chain of polymethacrylate with amine, alcohol, or thiol was investigated, and the reactions were applied to preparation of networked polymers. Isothiocyanate of polymer side chain rapidly reacted with amines without a catalyst, to give the corresponding thioureas. However, it did not react with alcohols or thiols under the same conditions. Using 1,8‐diazabicyclo[5.4.0]undec‐7‐ene (DBU) as a catalyst, addition of alcohols or thiols to the isothiocyanate proceeded smoothly. Addition of amines, alcohols, and thiols to isothiocyanates moiety contained in the side chain of polymethacrylate also proceeded readily with or without the catalyst, respectively, to effectively give the corresponding side chain modified polymers. Occurrence of these additions was confirmed by ¹H NMR and IR measurements. Glass transition temperatures and thermal decomposition temperatures of the obtained polymers were investigated by differential scanning calorimetry and thermogravimetric analysis. Networked polymers were easily prepared by addition of 1,6‐hexamethylenediamine or hexamethylene glycol to the polymethacrylate having isothiocyanato groups. © 2014 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2014 , 52, 1832–1842     

Binding of acetylcholine and quaternary ammonium compounds to a C3-symmetric bowl-shaped tripeptide of 2-(3-aminophenoxy)propanoic acids acting as a ditopic receptor

The new tripeptide reported here is composed of (R)-2-(3-aminophenoxy)propionic acid and is a bowl-shaped receptor that simultaneously binds both cations and anions of acetylcholine chloride and benzyltrimethylammonium compounds. An intriguing conformational change of the host was observed in the complexation of the ionic pair, where anion-induced flipping of the amide group on the macrocycle occurred.     

Design of Chitosan-5Fu Conjugate Exhibiting Antitumor Activity

In order to provide a macromolecular prodrug of 5-fluorouracil (5FU) reducing the side effects, having an affinity for tumor cells, and exhibiting strong antitumor activity, the covalent attachments of 5FUs to chitosan and chitosamino-oligosaccharide (COS) through hexamethylene spacer groups via urea, urea bonds were carried out. The effect of prolongation of life was tested in vivo against p388 lyrnphocytic leukemia in female CDF, mice by intra-peritoneal (i.p.) transplantation/i.p. injection and the growth-inhibitory effect on Meth-A fibrosarcoma or MH-134Y heputoma was evaluated in vivo in SPF-C3H/He scl male or Balb/c male mice by subcutaneous (s.c.) implantation/intravenous (i.v.) injection. The effects of the degree of polymerization of chitosan and     

Opening and Addition Modes in Propagation During Radical Polymerization of Fumaric and Maleic Derivatives

Abstract

Polymers of bis(trimethylsilyl) fumarate, di-tert-amyl fumarate, and methyl tert-amyl fumarate were prepared by radical polymerization at 60 or 120°C. The polymers were converted into poly(dimethyl fumarate) via thermolysis or hydrolysis and subsequent methylation to determine the tacticity using ¹³C-NMR spectroscopy. The probabilities of meso addition (P _m) were revealed to be 0.66 (60°C) for the bis(trimethylsilyl) ester, 0.60 (60°C) and 0.52 (120°C) for the di-tert-amyl ester, and 0.54 (60 and 120°C) for the methyl tert-amyl ester. From the temperature dependence of the P _m values, the differences in activation enthalpies and entropies for the meso and racemo additions were evaluated. The microstructure of poly(dimethyl fumarate) derived from poly(maleic anhydride) was also examined. The opening and addition modes in propagation of the fumaric and maleic derivatives were discussed based on the results obtained in the present and previous work.     

Decreased l-tryptophan concentration in distinctive brain regions of mice treated repeatedly with phencyclidine

It has been reported that repeated phencyclidine (PCP) treatment induces schizophrenia-like behavior in mice. l-Tryptophan (Trp) concentrations in brain tissues of control (n?=?8) and PCP-treated mice (10 mg/kg/day, s.c., 14 days, n?=?10) were determined using high-performance liquid chromatography (HPLC) with fluorescence detection. The HPLC method involved pre-column fluorescence derivatization with (R)-(?)-4-(N,N-dimethylaminosulfonyl)-7-(3-isothiocyanatopyrrolidin-1-yl)-2,1,3-benzoxadiazole (DBD-PyNCS). Eight different parts of the brain, namely, the frontal cortex, nucleus accumbens, striatum, hippocampus, amygdala, thalamus, hypothalamus, and cerebellum, of both groups were investigated. A significant decrease in the l-Trp concentration in the nucleus accumbens (p?=?0.024) and hippocampus (p?=?0.027) was observed in PCP-treated mice, suggesting that alteration of the l-Trp metabolism might occur in these brain parts.     

Facile Synthesis of Oxamides by Efficient Trapping of Carbamoyl Lithiums with Isocyanates

Unsymmetrical oxamides are conveniently synthesized in good yields by a new trapping reaction of unstable carbamoyl lithiums with isocyanates.     

Synthesis of 2,3-dihydro-1H-isoindole-1-thiones via the bromine–lithium exchange between 1-bromo-2-(1-isothiocyanatoalkyl)benzenes and butyllithium

The reaction of 1-bromo-2-(1-isothiocyanatoalkyl)benzenes, which are easily derived from 2-bromophenyl ketones or (2-bromophenyl)methanamine, with butyllithium generates 1-(1-isothiocyanatoalkyl)-2-lithiobenzenes, which immediately underwent intramolecular cyclization to give rise to the corresponding 3-substituted and 3,3-disubstituted 2,3-dihydro-1H-isoindole-1-thiones in good yields.