Crystal Structure and Magnetic Properties of SrCaMnGaO5+δ

The room-temperature crystal structure of the brownmillerite SrCaMnGaO_5+δ (δ=0.035) has been refined from neutron powder diffraction data; space group Ima2, a=15.7817(6), b=5.4925(2), c=5.3196(2)> Å. Mn and Ga occupy 99.0(2)% of the 6- and 4-coordinate sites, respectively. A combination of magnetometry, neutron diffraction and μSR spectroscopy has shown that the compound orders magnetically at 180 K, and that the low-temperature phase has a G-type antiferromagnetic structure, with an ordered magnetic moment of 3.30(2) μ_B per Mn at 2 K. Displaced hysteresis loops provide evidence that the atomic moment has an additional, glassy component. Magnetometry shows that significant short-range magnetic interactions persist above 180 K, and μSR that the spin fluctuations are thermally activated in this temperature region. The compound is an electrical insulator which at 159 K shows an unusually large magnetoresistance of 85% in 6 T, increasing to 90% in 13 T.     

Identification de stérols à chaîne latérale oxygénée dans une éponge de l'espèce Hyrtios

Thirty-two sterols are identified in the sponge Hyrtios sp. In addition to fourteen monohydroxylated compounds, the sterol fraction contains eight functionalized sidechain sterols, three of them new: 3 β-hydroxy-24-norchol-5-en-23-al (19) , (22-trans)-3 β-hydroxycholest-5, 22-dien-24-one (20) and (22R, 23R, 24S) or (22S, 23S, 24S)- 22,23-epoxy-24-methylchoest-5-en-3 β-ol (24). The probable biological origin, rather than artifact production, of these undescribed components is discussed.     

Capillary and microelectrophoretic separations of ligase detection reaction products produced from low-abundant point mutations in genomic DNA

Capillary gel electrophoresis (CGE) and polymer-based microelectrophoretic platforms were investigated to analyze low-abundant point mutations in certain gene fragments with high diagnostic value for colorectal cancers. The electrophoretic separations were carried out on single-stranded DNA (ssDNA) products generated from an allele-specific ligation assay (ligase detection reaction, LDR), which was used to screen for a single base mutation at codon 12 in the K-ras oncogene. The presence of the mutation generated a ssDNA fragment that was >40 base pairs (bp) in length, while the primers used for the ligation assay were <30 bp in length. Various separation matrices were investigated, with the success of the matrix assessed by its ability to resolve the ligation product from the large molar excess of unligated primers when the mutant allele was lower in copy number compared to the wild-type allele. Using CGE, LDR product models (44 and 51 bp) could be analyzed in a cross-linked polyacrylamide gel with a 1000-fold molar excess of LDR primers (25 bp) in approximately 45 min. However, when using linear polyacrylamide gels, these same fragments could not be detected due to significant electrokinetic biasing during injection. A poly(methylmethacrylate) (PMMA) microchip of 3.5 cm effective column length was used with a 4% linear polyacrylamide gel to analyze the products generated from an LDR. When the reaction contained a 100-fold molar excess of wild-type DNA compared to a G12.2D mutant allele, the 44 bp ligation product could be effectively resolved from unligated primers in under 120 s, nearly 17 times faster than the CGE format. In addition, sample cleanup was simplified using the microchip format by not requiring desalting of the LDR prior to loading.     

Structural, Infrared, and Magnetic Characterization of the Solid Solution Series Sr2−xPbx(VO)(VO4)2; Evidence of the Pb6sLone Pair Stereochemical Effect

The solid solution Sr_2−xPb_xV₃O₉, 0≤x≤2, was prepared by solid state reactions and characterized by X-ray diffraction, IR spectroscopy, and magnetic susceptibility measurements. Single crystals of the pure strontium phase and mixed Sr/Pb compounds were prepared by high temperature treatment of the respective powder compositions. Pb₂V₃O₉crystals could only be obtained by the electrochemical reduction of molten PbV₂O₆. These crystals were always twinned. The previously reported crystal structure of Sr₂V₃O₉was confirmed. It was refined toR=0.050,R_w=0.057, in space group C2/c,a=7.555(1) Å,b=16.275(2) Å,c=6.948(1) Å,β=119.78(1)°. The single crystal structural studies of the Sr_1.02Pb_0.98V₃O₉and Sr_0.67Pb_1.33V₃O₉members of the series show that the introduction of lead gives rise to a progressively complicated splitting of Sr²⁺/Pb²⁺and the tetrahedral vanadium ion crystallographic sites. As a consequence the vanadium framework distorts and beyond the Sr_0.5Pb_1.5V₃O₉composition the crystal symmetry becomes triclinic. This distortion is ascribed to the stereochemical effect of the 6s²lone pair of Pb²⁺. The crystallographic parameters of Pb₂V₃O₉area=7.598(1) Å,b=16.393(3) Å,c=6.972(2) Å,α=91.38(1)°,β=119.35(1)°,γ=90.47(1)°. Pb₂V₃O₉exhibits a more complex IR spectrum than the monoclinic phases. Despite the similarity between the triclinic and monoclinic phases the magnetic susceptibilities indicate differences in the coupling between V⁴⁺ions at low temperatures.     

Collective behavior of Franck-Condon excited states and energy transfer in DNA double helices

Absorption of UV radiation by DNA bases is known to induce carcinogenic mutations. The lesion distribution depends on the sequence around the hotspots, suggesting cooperativity between bases. Here we show that such cooperativity may intervene at the very first step of a cascade of events by formation of Franck-Condon states delocalized over several bases and subsequent energy transfer faster than 100 fs. Our study focuses on the double helix poly(dA).poly(dT), whose fluorescence, induced by femtosecond pulses at 267 nm, is probed by the upconversion technique and time-correlated single photon counting, over a large time domain (100 fs to 100 ns). The time-resolved fluorescence decays and fluorescence anisotropy decays are discussed in relation with the steady-state absorption and fluorescence spectra in the frame of exciton theory.     

Human immunoglobulin adsorption investigated by means of quartz crystal microbalance dissipation, atomic force microscopy, surface acoustic wave, and surface plasmon resonance techniques

Time-resolved adsorption behavior of a human immunoglobin G (hIgG) protein on a hydrophobized gold surface is investigated using multitechniques: quartz crystal microbalance/dissipation (QCM-D) technique; combined surface plasmon resonance (SPR) and Love mode surface acoustic wave (SAW) technique; combined QCM-D and atomic force microscopy (AFM) technique. The adsorbed hIgG forms interfacial structures varying in organization from a submonolayer to a multilayer. An "end-on" IgG orientation in the monolayer film, associated with the surface coverage results, does not corroborate with the effective protein thickness determined from SPR/SAW measurements. This inconsistence is interpreted by a deformation effect induced by conformation change. This conformation change is confirmed by QCM-D measurement. Combined SPR/SAW measurements suggest that the adsorbed protein barely contains water after extended contact with the hydrophobic surface. This limited interfacial hydration also contributed to a continuous conformation change in the adsorbed protein layer. The viscoelastic variation associated with interfacial conformation changes induces about 1.5 times overestimation of the mass uptake in the QCM-D measurements. The merit of combined multitechnique measurements is demonstrated.     

Synthesis and anticonvulsant activity of 3H-imidazo[4,5-c]-pyridazine, 1H-imidazo[4,5-d]pyridazine and 1H-benzimidazole analogues of 9-(2-fluorobenzyl)-6-methylamino-9H-purine

The 3H-imidazo[4,5-c]pyridazine, 1H-imidazo[4,5-d]pyridazine, and 1H-benzimidazole analogues of the potent anticonvulsant purine 9-(2-fluorobenzyl)-6-methylamino-9H-purine (1, 78U79) were synthesized and tested for anticonvulsant activity. The 3H-imidazo[4,5-c]pyridazines 8 and 9 were prepared in five stages from 3,4,5-trichloropyridazine (2) . The 1H-imidazolo[4,5-d]pyridazine 15 was synthesized in four stages from 5-[(benzyloxy)methyl]-1,5-dihydro-4H-imidazo[4,5-d] pyridazin-4-one (10a) . The benz-imidazole analogues 18 and 20 were prepared from 2,6-dinitroaniline in three stages. These compounds were one-tenth or less as active as 1 in protecting rats against maximal electroshock-induced seizures.     

Recovering a frame from its sheaves of algebras

Let

be a frame, α an element of

and T a finitary algebraic theory. In this paper we compare the category

of sheaves of T-algebras on

with the category Sh(α↓,T) of sheaves of T-algebras on α↓ (where α↓ is the initial segment {β|β<α}). This comparison suggests the definition of formal initial segments of the category

. For a large class of theories to be called ‘integral’ (examples of which are sets, monoids, groups, rings, modules on a integral domain, boolean algebras,hellip;) the formal initial segments of

coincide with the usual initial segments of

: this means that we are able to recover

axiomatically from

.When

is the initial frame {0, 1}, the frame of formal initial segments of

is the frame of open subsets of a compact space Spec T, called the spectrum of the theory T. When T is the theory of modules on some ring R, we recover in this way various well known notions of spectra and their corresponding sheaf-representation of the ring.     

Selective tryptophan modification with rhodium carbenoids in aqueous solution

A new transition metal-based reaction has been developed for the selective modification of tryptophan residues on protein substrates. After activation of vinyl-substituted diazo compounds by Rh2(OAc)4, the resulting metallocarbenoid intermediates were found to modify indoles in aqueous media despite competing reactions with water. Both N- and 2-substituted indole products were observed in the reaction. Following initial small-molecule studies, the reaction was performed on two protein substrates. Both myoglobin and subtilisin Carlsberg were modified readily in aqueous solution, and the tryptophan selectivity of the reactions was confirmed through MS analyses of trypsin digest fragments. It was also demonstrated that myoblobin concentrations as low as 10 muM still led to appreciable levels of modification. Reconstitution experiments confirmed that myoglobin retained its ability to bind heme following modification.