Structure and reactivity of the dammarenyl cation: configurational transmission in triterpene synthesis

[reaction: see text] The dammarenyl cation (13) is the last common intermediate in the cyclization of oxidosqualene to a diverse array of secondary triterpene metabolites in plants. We studied the structure and reactivity of 13 to understand the factors governing the regio- and stereospecificity of triterpene synthesis. First, we demonstrated that 13 has a 17beta side chain in Arabidopsis thaliana lupeol synthase (LUP1) by incubating the substrate analogue (18E)-22,23-dihydro-20-oxaoxidosqualene (21) with LUP1 from a recombinant yeast strain devoid of other cyclases and showing that the sole product of 21 was 3beta-hydroxy-22,23,24,25,26,27-hexanor-17beta-dammaran-20-one. Quantum mechanical calculations were carried out on gas-phase models to show that the 20-oxa substitution has negligible effect on substrate binding and on the activation energies of reactions leading to either C17 epimer of 13. Further molecular modeling indicated that, because of limited rotational freedom in the cyclase active site cavity, the C17 configuration of the tetracyclic intermediate 13 can be deduced from the angular methyl configuration of the pentacyclic or 6-6-6-6 tetracyclic product. This rule of configurational transmission aided in elucidating the mechanistic pathway accessed by individual cyclases. Grouping of cyclases according to mechanistic and taxonomic criteria suggested that the transition between pathways involving 17alpha and 17beta intermediates occurred rarely in evolutionary history. Two other mechanistic changes were also rare, whereas variations on cation rearrangements evolved readily. This perspective furnished insights into the phylogenetic relationships of triterpene synthases.     

The crystal structure of a bis-carbene complex of gold(I), {[(trans,trans-p-CH3C6H4NH)2C]Au}BF4

In the compound [(Ar(H)NCN(H)Ar)₂Au]BF₄ (Ar = p-tolyl) the two AuC bonds (2.02(1) Å) are colinear (177.4(1)°). Both the HN hydrogens lie on the same side of the carbene ligands, on the side away from the gold atom, so that the two carbene ligands are in an unusual trans,trans-configuration.     

Iron(III) tetra-(N-methyl-4-pyridyl)-porphyrin as a biomimetic catalyst of horseradish peroxidase on the electrode surface: an amperometric sensor for phenolic compound determinations

The use of iron(III) tetra-(N-methyl-4-pyridyl) porphyrin (FeIIIT4MpyP) and histidine (His) in the construction of an amperometric sensor for phenolic compound determinations is reported, based on horseradish peroxidase (HRP) chemistry. The sensor was prepared by modifying a glassy carbon electrode with Nafion membrane doped with FeIIIT4MpyP and His, in a mass ratio of 1:2. The sensor presented its best performance at 50 mV vs. SCE in 0.1 mol l(-1) succinate buffer (pH = 4.0) containing 125 micromol l(-1) H2O2. Under optimized operational conditions, a linear response range from 0.6 to 6.0 micromol l(-1) was obtained with a sensitivity of 61 nA cm(-2) micromol l(-1). The detection limit for catechol determination was 0.35 micromol l(-1). The response time was less than 0.5 s. The proposed sensor presented stable responses for 100 successive determinations, while satisfactory responses were observed even after 200 measurements. The repeatability, evaluated in terms of relative standard deviation, was 4% for n = 7. The signal responses for other phenolic compounds, including those of environmental and clinical interest, were also investigated.     

Molecular imprinting of β-cyclodextrin/cholesterol template into a silica polymer for cholesterol separation

The molecular assembly formed by the inclusion complex of cholesterol in β-cyclodextrin (β-CD:chol) was used as a template for the molecular imprinting of a sol–gel polymer (MIP/β-CD:chol), produced with tetraethoxysilane (TEOS) as precursor. The MIP/β-CD:chol and pure silica matrix (PSM) were tested for the efficiency of cholesterol removal from solutions at different cholesterol concentrations (1–10 mg/mL). The adsorption tests were run at 25°C using 1% (w/v) solid/liquid suspensions during 24 h. The MIP/β-CD:chol data on cholesterol adsorption was fitted by the Langmüir isotherm model, giving a maximum adsorption capacity of 76.5 mg cholesterol/g-adsorbent. The PSM data did conform to the Langmüir model. The maximum cholesterol adsorption achieved with the PSM was higher, 251 mg/g, probably due to multilayer adsorption. The hydrophobic silica matrix, imprinted with the inclusion complex of β-CD and a target molecule, has the potential of being used as an adsorbent for other organic molecules.     

1-pyrazolyliridium(I) derivatives; x-ray evidence for monodentate pyrazolato ligands

An X-ray crystal structure determination has shown that trans-(Ph₃P)₂Ir(CO)-(pyrazolato-N), obtained from the chloride and potassium pyrazolate, contains a monodentate azolato ligand.     

Theoretical prediction of gas-phase infrared spectra of imidazo[1,2-a]pyrazinediones and imidazo[1,2-a]imidazo[1,2-d]pyrazinediones derived from glycine

Imidazo[1,2-a]pyrazine-3,6-diones and imidazo[1,2-a]imidazo[1,2-d]pyrazine-3,8-diones can be produced by pyrolysis of simple amino acids. While such bicyclic and tricyclic amidines were detected and characterized by IR spectroscopy for some alpha-substituted amino acids, the parent systems composed of glycine fragments are unknown up to now. IR spectra for five amidines derived from glycine were calculated by using different semi-empirical (PM3, AM1, MNDO and MINDO/3), HF, and hybrid DFT (B3LYP, B3P86 and B3PW91) methods in conjunction with 6-31G(d) basis set (for HF and DFT). Vibration frequencies in the experimental IR spectra were predicted based upon the B3LYP data, by correcting the calculated wavenumbers by a scaling factor of 0.959. The behavior of most characteristic bands (nu(CX), nu(NH), etc.) and their shifts with respect to such bands in the spectra of alanine and alpha-aminoisobutyric acid derivatives studied before, are discussed. Performance of the semi-empirical methods was tested, bearing in mind possible future needs for IR spectra predictions for larger molecular systems of similar chemical nature; the use of MINDO/3 and MNDO is recommended. A basis set effect on the B3LYP fundamental vibration frequencies for hexahydroimidazo[1,2-a]pyrazine-3,6-dione was studied by varying Pople basis sets from minimal STO-3G to 6-311++G(d, p). No significant improvements were found beyond the 6-31G(d) basis set, which thus can be recommended to predict IR spectra for the amidines and similar molecules.     

Press-transferred carbon black nanoparticles on board of microfluidic chips for rapid and sensitive amperometric determination of phenyl carbamate pesticides in environmental samples

The authors describe a strategy for rapid and sensitive determination of phenyl carbamate pesticides in environmental samples. It consists of the following steps: (a) Enrichment and clean-up of the analytes using a C18 microtip based procedure; (b) alkaline hydrolysis of the carbamates (carbofuran, isoprocarb and carbaryl) to form phenol derivatives; and (c) fast separation and amperometric detection in a microfluidic chip (MCs). The microchips were fabricated by using press-transferred carbon black nanoparticles (CB-NPs) as electrochemical sensing nanomaterial. The excellent electrochemical behavior of the CB-NPs coupled to the microchip warrants good separation and allows for the voltammetric determination (best at a working voltage of +0.70 V vs Ag/AgCl) of the carbamates within < 6 min. The authors also describe a rapid procedure for the clean-up and enrichment of the carbamates from real samples by using a C18 microtip. The procedure allowed a 10-fold enrichment of the analytes, and this led to a detection limits in ?the 0.7 to 1.2 μM concentration range. The assay was applied to samples of river, lake and irrigation water that were spiked with carbamates at 50 and 100 μM levels. Recoveries are in the 87 to 108 % range, and RSDs (n = 3) in the 5 to 11 % range. The exploitation of the such nanomaterials coupled to microfluidics and microextraction procedures for real sample analysis in our preception represents a most viable tool for the analysis of complex real samples, for on-site environmental monitoring, and for rapid diagnosis.

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Graphical abstract Press-printed carbon black nanoparticles films on board of microfluidic chips.

     

On the whole spectrum of Timoshenko beams. Part I: a theoretical revisitation

The problem of free vibrations of the Timoshenko beam model is here addressed. A careful analysis of the governing equations allows identifying that the vibration spectrum consists of two parts, separated by a transition frequency, which, depending on the applied boundary conditions, might be itself part of the spectrum. For both parts of the spectrum, the values of natural frequencies are computed and the expressions of eigenmodes are provided. This allows to acknowledge that the nature of vibration modes changes when moving across the transition frequency. Among all possible combination of end constraints which can be applied to single-span beams, the case of a simply supported beam is considered. These theoretical results can be used as benchmarks for assessing the correctness of the numerical values provided by several numerical techniques, e.g. traditional Lagrangian-based finite element models or the newly developed isogeometric approach.     

Ribes nigrum Leaf Extract Preferentially Inhibits IFN-γ-Mediated Inflammation in HaCaT Keratinocytes

Ribes nigrum L. (blackcurrant) leaf extracts, due to high levels of flavonols and anthocyanins, have been shown to exhibit beneficial effects in inflammatory diseases. However, whereas their traditional use has been investigated and validated in several models of inflammation and oxidative stress, the possible impact on skin disorders is still largely unknown. The purpose of this work was to elucidate the effects of R. nigrum leaf extract (RNLE) on keratinocyte-derived inflammatory mediators, elicited by a Th1 or Th2 cytokine milieu. HaCaT cells were challenged with TNF-α, either alone or in combination with the costimulatory cytokines IFN-γ or IL-4, and the release of proinflammatory cytokines and mediators (IL-8, IL-6, s-ICAM-1, and TSLP) was evaluated. The results showed that RNLE preferentially interferes with IFN-γ signaling, demonstrating only negligible activity on TNF-α or IL-4. This effect was attributed to flavonols, which might also account for the ability of RNLE to impair TNF-α/IL-4-induced TSLP release in a cAMP-independent manner. These results suggest that RNLE could have an antiallergic effect mediated in keratinocytes via mechanisms beyond histamine involvement. In conclusion, the discovery of RNLE preferential activity against IFN-γ-mediated inflammation suggests potential selectivity against Th1 type response and the possible use in Th1 inflammatory diseases.     

Methodology to Quantify and Screen the Demineralization of Teeth by Immersing Them in Acidic Drinks (Orange Juice,Coca-Cola™, and Grape Juice): Evaluation by ICP OES

Oral health problems may occur as a result of the ingestion of acid drinks. The objective of this in vitro study was to quantify and screen the concentration of potassium (K), phosphorus (P), calcium (Ca), magnesium (Mg), manganese (Mn), zinc (Zn), iron (Fe), copper (Cu), barium (Ba), lead (Pb), arsenic (As), cadmium (Cd), aluminum (Al), cobalt (Co), chromium (Cr), molybdenum (Mo), sodium (Na), nickel (Ni), selenium (Se), and vanadium (V) released from bovine incisors during an erosive challenge at different times of exposure when immersed in Coca-Cola™, orange juice, and grape juice. A total of 240 samples of bovine incisor teeth were used for the erosive challenge and allocated in groups. Digestion of drinks was performed using microwave-assisted digestion. The content in acidic drinks was monitored before and after the erosive challenge at exposure times of 1, 5, and 60 min using inductively coupled plasma optical emission spectrometry (ICP OES). The drinks’ pH varied slightly during the erosive challenge but remained below the critical value of pH 5 to cause tooth demineralization. The concentrations of elements released from the bovine incisors during the in vitro erosive challenge depend on exposure times when immersed in acidic beverages. For some elements such as Ca, Mn, Zn, Fe, Cu, Ba, Pb, As, and Cd, quantified in acidic drinks, grape juice had greater erosive potential than Coca-Cola™ and orange juice. Quantification and monitoring of chemical elements in bovine teeth can be performed considering a longer erosive time and other types of acidic drinks. Further analysis using human teeth is still not available and must be conducted. The demineralization of teeth not only occurs in acidic beverages; physical and chemical factors play other roles and should be investigated.