Molecular structures and vibrational frequencies of 2-, 3- and 4-pyridine carboxaldehydes by ab initio Hartree-Fock and density functional theory calculations

The optimised molecular structures, vibrational frequencies and corresponding vibrational assignments of the cis and trans conformers of 2-, 3- and 4-pyridine carboxaldehydes have been calculated using ab initio Hartree-Fock (HF) and density functional theory (B3LYP) methods with 6-311++G(d, p) basis set. The calculations were adapted to the C(S) symmetries of all the molecules. The mean vibrational deviations between the vibrational frequency values of the two conformers of all the compounds have been seen to increase while the relative energies increase and it was concluded the more different the molecular structure of the two conformers is the higher the relative energy is between them, and thus a bigger mean vibrational deviation.     

Arsenic speciation in water and biota samples at trace levels by ion chromatography inductively coupled plasma-mass spectrometry

A sensitive, reliable, simple and rapid analytical method was developed for the determination of arsenite [As(III)], arsenate [As(V)] and arsenobetaine (AsB) species using ion chromatography combined with inductively coupled plasma-mass spectrometry (IC-ICP-MS). Inorganic and organic arsenic species were separated with an anion exchange column (Dionex AS9) and a 50 mM sodium bicarbonate mobile phase (pH 10) at a flow rate of 1.0 mL min^?1. %RSD values were found to be lower than 5.1% for all arsenic species. The limits of detection (LOD) obtained for As(III), As(V) and AsB were 16.5 ng L^?1, 14.1 ng L^?1 and 6.2 ng L^?1, respectively. The developed analytical method was tested using AsB certified reference material (NMIJ CRM 7901-a), and spring water certified reference material (UME CRM 1201) for accuracy check. This method was applied for the quantitative determination of arsenic species in different water samples and chicken samples as a solid matrix.     

Aromatization of triafulvene and its exocyclic Si,Ge, and Sn derivations by complexation with halogen atoms

The geometries of triafulvene (TF) and its exocyclic Si, Ge, and Sn analogues complexes with F, Cl, Br, and I halogen atoms (TF(X)···Y, X═C, Si, Ge, and Sn; Y═F, Cl, Br, and I) were studied. The complexes were optimized at DFT(B3LYP)/6–311+G(d,p) level of theory. To assess the aromaticity of the considered complexes the geometry-based (HOMA), magnetism-based (NICS), and recently introduced electronic-based (electric field gradient (EFG(0); Shannon aromaticity (SA)) aromaticity indices were employed. The increasing tendency of aromaticity in each complex species was noted as the series of TF(X)···F > TF(X)···Cl > TF(X)···Br > TF((X)···I. Then, the binding energies corrected by basis set super position error (BSSE) were calculated by single point energy calculations at M06-2X/6-311+G(d,p) level. Natural bond orbital (NBO) analysis confirmed that the charge transfer takes place from TF(X) to the halogen atoms. Some topological parameters, within the framework of the quantum theory of atoms in molecules (QTAIM), were also calculated to estimate the aromaticity of the complexes. It was seen that there are some important correlations between the topological parameters and aromaticity indices. In addition the most striking finding was that all the TF(X) molecules are connected with the halogen atoms through Y···C1═C2 (π) noncovalent interaction. This interaction was also investigated through noncovalent interaction (NCI) analysis.     

Molecular structures and vibrational frequencies of xanthine and its methyl derivatives (caffeine and theobromine) by ab initio Hartree-Fock and density functional theory calculations

The molecular structures, vibrational frequencies and corresponding vibrational assignments of xanthine and its methyl derivatives (caffeine and theobromine) have been calculated using ab initio Hartree-Fock (HF) and density functional theory (B3LYP) methods with 6-31G(d, p) basis set level. The calculations were utilized to the C(S) symmetries of the molecules. The obtained vibrational frequencies and optimised geometric parameters (bond lengths and bond angles) were seen to be well agreement with the experimental data. The used scale factors which have been obtained the ratio of the frequency values of the strongest peaks in the calculated and experimental spectra seem to cause the gained vibrations well corresponding to the experimental ones. Theoretical infrared intensities and Raman activities are also reported.     

Determination of carotenoid and tocopherol content in maize flour and oil samples using near-infrared spectroscopy

Abstract

Secondary metabolites are important components in terms of nutrition and health. Carotenoids and tocopherols, two groups of the fat-soluble components, are also included in this category. There is an increasing interest in the detection of secondary metabolites with near-infrared spectroscopy. However, the number of scientific studies for the detection of these components, especially for tocopherols in corn flour or oil samples by near-infrared reflectance spectroscopy is rather limited. This study was carried out to determine the amount of carotenoids and tocopherols in flour and oil samples of 250 different maize genotypes by near-infrared reflectance spectroscopy using the partial least squares regression modeling method. Liquid chromatography mass spectrophotometry was used as a reference method in order to determine the contents of five carotenoids and four tocopherol subcomponents. The estimation models were created by using the spectral data collected from ground samples, and oil samples extracted from the same flour; along with the results of the reference analysis. The reliability of these models was tested by external validation (n?=?50). The prediction models generated by the spectra taken from corn flour yielded more successful results than the models created with the spectra taken from the oil samples. Among the models compared, the one developed with the spectra taken from flour samples for lutein was the most successful. It is seen that the estimation models generated from flour samples can be used for screening purposes, though different approaches are needed to increase the success of models.     

Rapid detection of sucrose adulteration in honey using Fourier transform infrared spectroscopy

Abstract

Honey authenticity is of great importance for commercial and health reasons. The most common adulteration methods are overfeeding of bees with sugar or by adding sucrose. In the study, a Fourier transform infrared spectroscopy based on chemometric method, a partial least squares, for determination of sucrose sirup adulteration of Turkish honeys was improved. For this purpose, honey samples were adulterated with known amounts of sucrose sirup in concentrations ranging between 5.94 and 27.80%. A calibration curve was constructed within 992–923?cm^?1 with the regression coefficient of 0.999. Obtained results from the spectra were confirmed by high performance liquid chromatography-refractive index detector and a good correlation was found between the results of the spectroscopic and chromatographic methods. Additionally, some method validation parameters (linearity, repeatability, limit of detection, and quantification) of the spectroscopic method were studied and obtained results were compared with chromatographic method. To prove the usefulness of the method, twenty different honey samples were collected from markets in Turkey and analyzed for sucrose contents. The results indicated that predicted sucrose concentration of honey samples by the spectroscopic method ranged between 4.52 and 15.16% and results were confirmed by the chromatographic method with high correlation (correlation coefficient = 92%). The results of the present indicated showed that adulteration ratio of honey samples by sugar addition can be detected using Fourier transform infrared spectroscopy technique in a short time with high accuracy. In conclusion, this method could be regarded as a new alternative technique for routine analysis in quality control of honey samples.     

Phase damping destroys quantum Fisher information of W states

We study the quantum Fisher information (QFI) of W states in the basic decoherence channels. We show that, as decoherence starts and increases, under i) depolarizing, QFI smoothly decays; ii) amplitude damping, QFI first exhibits a sudden drop to the shot noise level, then decreases to zero and finally increases back to the shot noise level; iii) phase damping, QFI is zero for all non-zero decoherence. We also find that on the contrary to GHZ states, QFI of W states in x and y directions are equal to each other and zero in z direction.