A comparative study of surfactant adsorption on model surfaces using the quartz crystal microbalance and the ellipsometer

The nature of hexaethylene glycol mono-n-tetradecyl ether (C(14)EO(6)) layers adsorbed onto different model surfaces was systematically investigated by means of QCM-D (quartz crystal microbalance-dissipation) and ellipsometry. The amount of non-ionic surfactant adsorbed is determined both at hydrophilic and hydrophobic surfaces. In particular, the substrates employed were hydrophilic silica, hydrophobized silica (using dimethyldichlorosilane), and hydrophobized gold surfaces (using 10-thiodecane and 16-thiohexadecane). It was shown that the frequency shift obtained from the QCM-D experiments results in an overestimation of the adsorbed mass. This is attributed to two different effects, viz. water that is coupled to the adsorbed layer due to hydration of the polar region of the surfactant and second water that for other reasons is trapped within the adsorbed layer. Furthermore, from the ellipsometry data the adsorbed layer thickness is determined. By combining the thickness information and the dissipation parameter (obtained from the QCM-D experiments), we note that the dissipation parameter is insufficient in describing the viscoelastic character of thin surfactant films.     

Analytical methods used to measure acrylamide concentrations in foods

The state-of-the-art of analysis for acrylamide in food is reviewed. The majority of analytical methods adopts a similar approach: addition of internal standard to the specimen, extraction with water, purification of extract using a solid-phase extraction cartridge, and then determination using either gas chromatography coupled to mass spectroscopy (GC/MS) after bromination, or direct measurement with liquid chromatography coupled to mass spectroscopy (LC/MS). The available methods generally show good agreement and are likely to be accurate. However, improvements in precision (within-laboratory) and repeatability (between-laboratory) are needed by particular data users.     

Guessing the state of a quantum system from a limited set of observations

A quantum system is repeatedly prepared in the same way and then observed in measurement processes. The following problem is stated and solved: Given the results of a series of observations, what is the best guess for a density matrix describing the ensemble of prepared systems? The corresponding classical problem and its solution are obtained as a special case.     

Comparative study of DFT methods applied to small titanium/oxygen compounds

The performance of a number of different local and nonlocal density functional theory (DFT) methods has been investigated for some small titanium—oxygen systems. Equilibrium geometries, ionization potentials, dipole moments, atomization energies, and harmonic vibrational frequencies have been calculated for the TiO, TiO₂, and Ti₂ molecules, and the results are compared with experimental data and ab initio calculations. It is shown that most DFT methods perform much better than the ab initio Hartree—Fock (HF), second-order perturbation theory (MP2), and configuration interaction including single and double excitations (CISD) treatments. For good agreement with experimental data, gradient corrections to the exchange part of the DFT functional are needed, as well as some type of correction for the errors in the calculated energy splittings between different atomic states of titanium. Hybrid methods including a mixture of HF exchange with DFT exchange correlation do not perform as well as “pure” DFT methods for the studied systems. © 1996 John Wiley & Sons, Inc.     

Megavariate Analysis of Environmental QSAR Data. Part II – Investigating Very Complex Problem Formulations Using Hierarchical, Non-Linear and Batch-Wise Extensions of PCA and PLS

Summary Three extensions of the basic PCA and PLS methodologies are described. These extensions are hierarchical, non-linear and batch-based in nature. The objectives of these methods are to assist in problem understanding and problem solving in very complex (QSAR) problem formulations. The method extensions are illustrated using two example QSAR data sets containing many X- and Y-variables.     

Measurements of γ-γ and γ-electron directional correlations in119Sb

The directional correlations ofγ-γ andγ-electron cascades in¹¹⁹Sb are measured, in the decay of^119mTe. Bothγ-γ andγ-electron directional correlation coefficients are determined for the cascades (energies in keV): 153.5-1212.7, 942.3-270.5, (976.2+979.3)-270.5, 1095.7-270.5 and 1136.8-270.5. For the cascades 912.6-1366.2, 2013.4-270.5 and 2089.9-270.5γ-γ directional correlations are measured. The mixing ratios evaluated are:δ(M2/E1, 153.5 keV)=0.0003±0.0023,δ(E2/M1, 270.5 keV)=-0.39±0.29,δ(E2/M1, 942.3 keV)= ?0.26±0.12,δ(E3/M2,1095.7 keV)=?0.01±0.07, andδ(M3/E2,1212.7 keV) =0.004±0.007. The result is compared with theoretical predictions.     

Theoretical study of the antioxidant properties of pyridoxine

Molecules acting as antioxidants capable of scavenging reactive oxygen species (ROS) are of utmost importance in the living cell. The antioxidative properties of pyridoxine (vitamin B6) have recently been discovered. In this study, we have analyzed the reactivity of pyridoxine toward the ROS (.-)OH, (.-)OOH, and (.-)O(2)- at the density functional theory level (functionals B3LYP and MPW1B95). Two reaction types have been studied as follows: addition to the aromatic ring atoms and hydrogen/proton abstraction. Our results show that (.-)OH is the most reactive species, while (.-)OOH displays low reactivity and (.-)O2(-) does not react at all with pyridoxine. The most exergonic reactions are those where (.-)H is removed from the CH(2)OH groups or the ring-bound OH group and range from -33 to -39 kcal/mol. The most exergonic addition reactions occur by attacking the carbon atoms bonded to nitrogen but with an energy gain of only 6 kcal/mol.     

Theoretical prediction of the protein–protein interaction between Arabidopsis thaliana COP1 and UVR8

In plants, ultraviolet-B radiation (280–315 nm) regulates gene expression and plant morphology through the UV RESPONSE LOCUS 8 (UVR8) photoreceptor. The first signaling event after quantal absorbance is the interaction of the UVR8 C-terminus with the E3 ubiquitin ligase CONSTITUTIVELY PHOTOMORPHOGENIC 1 (COP1). The nature of the interaction between these two proteins is hitherto unknown. A protein homology model of the Arabidopsis thaliana COP1 seven-bladed propeller WD40 repeat domain and de novo folds of the C-terminal 27 amino acid (amino acids 397–423) peptide of Arabidopsis UVR8 (UVR8^397?423) is herein reported. Using a theoretical computational docking protocol, the interaction between COP1 and UVR8 was predicted. A core motif was identified in UVR8^397?423 comprising adjacent hydrophobic residues V410 and P411 together with a charged residue D412, homologous to corresponding motifs in other COP1-binding proteins, such as ELONGATED HYPOCOTYL 5 (HY5), cryptochrome 1 (CRY1), and salt tolerance proteins STO/STH. The protein–protein interaction between the COP1 WD40 repeat domain and UVR8^397?423 reveals binding within a region of COP1 overlapping with the binding site for HY5 and the other COP1-interacting proteins. This study provides a framework for understanding docking between UVR8 and COP1, which in turn gives clues for experimental testing of UVR8/COP1 interaction.