Absolute EPR spin echo and noise intensities.

EPR signal and noise, calculated from first principles, are compared with measured values of signal and noise on an S-band (ca. 2.7 GHz) EPR spectrometer for which all relevant gains and losses have been measured. Agreement is within the uncertainty of the calculations and the measurements. The calculational model that provided the good agreement is used to suggest approaches to optimizing spectrometer design.     

X-band Electron Spin Relaxation Times for Four Aromatic Radicals in Fluid Solution and Comparison with Other Organic Radicals

X-band electron spin relaxation times of BDPA (1:1 α,γ-bisdiphenylene-β-phenylallyl), galvinoxyl 2,6-di-tert-butyl-α-(3,5-di-tert-butyl-4-oxo-2,5-cyclohexadien-1-ylidene)-p-tolyloxy, DPPH (2,2-diphenyl-1-picrylhydrazyl) and thianthrene radicals in fluid solution were measured by electron spin echo and inversion recovery at ambient temperature. Tumbling correlation times are estimated to be in the range of 20–30 ps. In this fast tumbling regime T ₁ ~ T ₂. Relaxation times are compared with previously reported values for symmetrically substituted triarylmethyl, semiquinone, and nitroxide radicals. The concentration dependence of spin lattice relaxation for neutral BDPA in toluene is about 10³ times greater than for anionic trityl radicals in water. T ₁ decreases in the order carbon-center BDPA > galvinoxyl > DPPH > thianthrene. The dominant relaxation mechanisms are proposed to be a local mode for BDPA, spin rotation, local mode and modulation of anisotropic proton hyperfine coupling for galvinoxyl, modulation of anisotropic nitrogen hyperfine for DPPH, and spin rotation plus modulation of anisotropic proton hyperfine coupling for thianthrene.     

Frequency dependence of EPR signal intensity, 248 MHz to 1.4 GHz

The electron paramagnetic resonance pulsed free induction decay (FID) of a degassed solution of a triaryl methyl radical, methyl tris(8-carboxy-2,2,6,6-tetramethyl(-d3)-benzo[1,2-d:4,5-d']bis(1,3)dithiol-4-yl) tripotassium salt, 0.2 mM in H2O, was measured at VHF (247.5 MHz) and L-band (1.40 GHz). The calculated and observed FID signal amplitudes (in millivolts) agreed within 1 and 6%, and the ratio of the normalized FID signals at the two frequencies agreed within 5%. The FID decay time constant was 2.7 micros at both frequencies.     

Conformational basis for asymmetric seeding barrier in filaments of three- and four-repeat tau

Tau pathology in Alzheimer's disease is intimately linked to the deposition of proteinacious filaments, which akin to infectious prions, have been proposed to spread via seeded conversion. Here we use double electron-electron resonance (DEER) spectroscopy in combination with extensive computational analysis to show that filaments of three- (3R) and four-repeat (4R) tau are conformationally distinct. Distance measurements between spin labels in the third repeat, reveal tau amyloid filaments as ensembles of known β-strand-turn-β-strand U-turn motifs. Whereas filaments seeded with 3R tau are structurally homogeneous, filaments seeded with 4R tau are heterogeneous, composed of at least three distinct conformers. These findings establish a molecular basis for the seeding barrier between different tau isoforms and offer a new powerful approach for investigating the composition and dynamics of amyloid fibril ensembles.     

Frequency dependence of electron spin relaxation for threeS = 1/2 species doped into diamagnetic solid hosts

Electron spin lattice relaxation rates (1/T₁) were measured as a function of temperature at two or three microwave frequencies for threeS = 1/2 species in temperature ranges with different dominant relaxation processes. Between 10 and 50 K the contribution from the direct process to the relaxation rate was substantially greater at 94 than at 9.5 GHz for a vanadyl porphyrin doped into zinc tetratolylporphyrin. For bis(diethyldithiocarbamato)copper(II) doped into the diamagnetic Ni(II) analog the relaxation rate between 25 and 100 K is dominated by the Raman process and exhibits little frequency dependence between 9.2 and 94 GHz. For 4-hydroxy-2,2,6,6-tetramethylpiperidinoloxy (tempol) doped into a diamagnetic host the relaxation rate between about 40 and 100 K is dominated by the Raman process. In this temperature range, relaxation rates at 3.2, 9.2, and 94 GHz exhibit little frequency dependence. Above about 130 K, the relaxation rate for tempol decreases in the order S-band s> X-band > W-band. The relaxation rates in this temperature range fit a model in which 1/T₁ is dominated by a thermally activated process that is assigned as rotation of the methyl groups on the nitroxyl ring.     

Aged nuclear explosive melt glass: Radiography and scanning electron microscope analyses documenting radionuclide distribution and glass alteration

Assessment of the long-term performance of nuclear melt glass under saturated conditions provides insight into factors controlling radionuclide release into groundwater. Melt glass samples were collected from an underground nuclear detonation cavity at the Nevada Test Site that was in contact with groundwater for more than 10 years. The samples were made into thin sections and the distribution of alpha-activity mapped using CR-39 plastic detectors. The melt glass is visually heterogeneous and the results of the alpha-track radiography indicate that the highest alpha-activity is associated with areas of dark colored glass. Analyses of the thin sections by alpha-spectrometry show the prominent actinide species to be ²³⁸Pu, ^239,240Pu and ²⁴¹Am. Scanning electron microprobe analysis of the bulk glass shows conspicuous alteration layers lining internal vesicle surfaces in the glass. X-ray diffraction patterns for the alteration phases are consistent with clay mineral compositions. Glass dissolution models indicate these layers are too thick to have formed at ambient temperatures over the 10 year period in which they remained in a saturated environment. This implies the alteration layers likely formed at temperatures higher than ambient during cooling of the cavity following the underground detonation. Mobilization of this clay alteration layer as colloidal particles in groundwater represents a potential source of actinide release into the environment.     

Integrated three-dimensional filter separates nanoscale from microscale elements in a microfluidic chip

We report on the integration of a size-based three-dimensional filter, with micrometre-sized pores, in a commercial microfluidic chip. The filter is fabricated inside an already sealed microfluidic channel using the unique capabilities of two-photon polymerization. This direct-write technique enables integration of the filter by post-processing in a chip that has been fabricated by standard technologies. The filter is located at the intersection of two channels in order to control the amount of flow passing through the filter. Tests with a suspension of 3 μm polystyrene spheres in a Rhodamine 6G solution show that 100% of the spheres are stopped, while the fluorescent molecules are transmitted through the filter. We demonstrate operation up to a period of 25 minutes without any evidence of clogging. Preliminary validation of the device for plasma separation from whole blood is shown. Moreover, the filter can be cleaned and reused by reversing the flow.     

RNA-mediated synthesis of palladium nanoparticles on Au surfaces

RNA catalysts for the shape-controlled synthesis of Pd particles from the precursor complex trisdibenzylideneacetone dipalladium ([Pd2(DBA)3] were recently discovered in our laboratory (J. Am. Chem. Soc. 2005, 127, 17814-17818). In the work described here, RNA codes for hexagonal Pd platelets and Pd cubes were covalently immobilized on gold surfaces and evaluated for their activity toward particle synthesis. When coupled to gold via oligoethylene glycol linkers, both RNA sequences were able to catalyze the formation of Pd particles with the same shape control previously observed in solution. For low surface coverages, the average distance between RNA molecules on the surface was estimated at ca. 300 nm, yet large (e.g., dimensions of hundreds of nanometers) Pd hexagons and cubes still formed. This surprising result suggests that a single RNA molecule may be sufficient for nucleating and controlling the shapes of these particles. Finally, the use of surface-bound RNA as a tool for directing the orthogonal synthesis of materials on surfaces was demonstrated. Patterning the RNA code for Pd hexagons next to the code for Pd cubes, followed by incubation in a solution containing [Pd2(DBA)3], resulted in the spontaneous formation of spatially distinct spots of hexagonal and cubic particles.     

Thermodynamic evidence for Ca2+-mediated self-aggregation of Lewis X gold glyconanoparticles. A model for cell adhesion via carbohydrate-carbohydrate interaction

Thermodynamic evidence for the selective Ca(2+)-mediated self-aggregation via carbohydrate-carbohydrate interactions of gold glyconanoparticles functionalized with the disaccharides lactose (lacto-Au) and maltose (malto-Au), or the biologically relevant trisaccharide Lewis X (Le(X)-Au), was obtained by isothermal titration calorimetry. The aggregation process was also directly visualized by atomic force microscopy. It was shown in the case of the trisaccharide Lewis X that the Ca(2+)-mediated aggregation is a slow process that takes place with a decrease in enthalpy of 160 +/- 30 kcal mol(-)(1), while the heat evolved in the case of lactose and maltose glyconanoparticles was very low and thermal equilibrium was quickly achieved. Measurements in the presence of Mg(2+) and Na(+) cations confirm the selectivity for Ca(2+) of Le(X)-Au glyconanoparticles. The relevance of this result to cell-cell adhesion process mediated by carbohydrate-carbohydrate interactions is discussed.