Computational modeling of amorphous silica. 4. Modeling the initial structures. Aerogel

A qualitative classification algorithm for constructing large clusters of aerogel model structures is used. According to this algorithm, aerogel is classified with polysilicas characterized by a packing of long chains of silicon-oxygen tetrahedra. A model of the aerogel structure is suggested, according to which aerogel is described as a set of cross-linked chains forming double or more complex ribbons. This model is in agreement with the conclusions drawn from analysis of the vibration spectra of its components. Institute of Surface Chemistry, Ukrainian Academy of Sciences. Russian University of Peoples' Friendship. Translated fromZhurnal Strukturnoi Khimii, Vol. 35, No. 3, pp. 35–38, May–June, 1994. Translated by O. Kharlamova     

Biomimetic dyes as affinity chromatography tools in enzyme purification

Affinity adsorbents based on immobilized triazine dyes offer important advantages circumventing many of the problems associated with biological ligands. The main drawback of dyes is their moderate selectivity for proteins. Rational attempts to tackle this problem are realized through the biomimetic dye concept according to which new dyes, the biomimetic dyes, are designed to mimic natural ligands. Biomimetic dyes are expected to exhibit increased affinity and purifying ability for the targeted proteins. Biocomputing offers a powerful approach to biomimetic ligand design. The successful exploitation of contemporary computational techniques in molecular design requires the knowledge of the three-dimensional structure of the target protein, or at least, the amino acid sequence of the target protein and the three-dimensional structure of a highly homologous protein. From such information one can then design, on a graphics workstation, the model of the protein and also a number of suitable synthetic ligands which mimic natural biological ligands of the protein. There are several examples of enzyme purifications (trypsin, urokinase, kallikrein, alkaline phosphatase, malate dehydrogenase, formate dehydrogenase, oxaloacetate decarboxylase and lactate dehydrogenase) where synthetic biomimetic dyes have been used successfully as affinity chromatography tools.     

Determination of low levels of an antioxidant in polyolefins by large-volume injection temperature-programmed packed capillary liquid chromatography

Sub-ambient column temperatures, promoting strong interactions between the analyte and the stationary phase material, were utilized to focus large volumes of the polyolefin antioxidant Irganox 1076 [benzenepropanoic acid, 3.5-bis(1,1-dimethylethyl)-4-hydroxy-, octadecyl ester] on the column inlet, using pure acetonitrile as sample solvent and mobile phase. Injection volumes up to 100 microl were successfully employed on a 50 cm x 320 microm I.D. capillary column packed with 5 microm Kromasil 100 ODS particles. Irganox 1076 was eluted after completed injection by temperature programming, using a temperature program from 7 to 90 degrees C, in 3 degrees C min(-1). UV detection, using a low-dispersion "U"-shaped flowcell, was performed at 280 nm. The method was applied for the determination of Irganox 1076 that was extracted from low-density polyethylene (0.6 ppm, w/w). Both Soxhlet and microwave-aided solvent extractions were performed, using chloroform and acetonitrile as solvents, respectively. The microwave-aided extraction with acetonitrile was found to give approximately the same yield as the standard Soxhlet reference method. Consequently, small volumes of acetonitrile could be used both as extraction solvent, sample solvent and mobile phase, simplifying the analysis process. The mass limit of detection of the method was found to be 3.3 ng, corresponding to a concentration limit of detection of 33 ng ml(-1), utilizing an injection volume of 100 microl. The within and between day precision of retention times displayed relative standard deviations below 1.2%.     

Rheology of PVC plastisol--VI: criteria for yielding and fracture of an immobilized layer

PVC plastisol exhibits pseudo-plastic flow in steady shear; that is, viscosity decreases with the increasing shear rate. At higher shear rates viscosity reaches a minimum and then increases, i.e., dilatant behavior. Previously, pseudo-plastic behavior was explained by a mechanism in which the suspended particles partition into an immobilized layer and a mobile phase. The development of the immobilized layer with the increase in shear rate was shown to quantitatively account for pseudo-plastic behavior. In higher shear rates dilatation of the immobilized layer was shown to be the cause of dilatacy. At even higher shear rates the immobilized layer fractures. In this paper the viscosity minimum was interpreted as the yielding of the immobilized layer. Subsequently, data in the literature were analyzed to find criteria for the yielding and fracture of the immobilized layer. Yielding was found to obey Coulomb's criterion, from which the coefficient of friction and the cohesive strength of the immobilized layer were evaluated. These properties were controlled by the nature of particle assembly in the immobilized layer and the plasticizer type had only a minor effect. The value of the coefficient of friction was on the lower side and within the range of values found in the literature for other materials. There were two modes of fracture of the immobilized layer, one with low strength, low strain to break, and the other with high strength, high strain to break. The former is analogous to the brittle fracture of solids and the latter ductile failure. The strength of brittle fracture was somewhat higher than cohesive strength, which was evaluated from yielding data. This is akin to Griffith's criterion for brittle fracture of a solid. Ductile failure occurred when the shear stress exceeded normal stress.     

Synthesis and stereochemistry of (−)-(10s)-6,10-dimethyl-6-aza-δ1,9-octahydroquinoline

Enantiomericalfy pure (–)-(10S)-6,10-dimethyl-6-am-^1,9-octahydroquinoline, which has been obtained from optically pure (3S)-1,3-dimethyl-3-(2-cyanoethyl)piperid-4-one, is a chiral intermediate for the preparation of novel biologically active compounds and an analog of piperidine and decahydroquinoline alkaloids. The chiroptical properties of the synthesized 6-azaoctahydroquinoline are examined.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 10, pp. 1379–1383, October, 1992.     

Heteroallen-komplexe des molybdänocens

Reactions of the extremely labile molybdenocene olefin complexe Mo(η⁵-C₅H₅)₂[(Z)-C₆H₅CH=CHC₆H₅] with heteroallenes X=C=Y (X=C=Y = CS₂, (p-tolyl)NCN(p-tolyl), (C₆H₅)₂CCO) gives the corresponding heteroallene complexes of molybdenocene Mo(η⁵-C₅H₅)₂(X=C=Y) in high yields. Spectroscopic data clearly indicate a dihapto-coordination of the heteroallenes via the C=X bond (X = O, S, N).     

Rare earth element patterns in biotite muscovite and tourmaline minerals

Rare earth element concentrations in the minerals biotite and muscovite from the mica schist country rocks of the Etta pegmatite and tourmalines from the Bob Ingersoll pegmatite have been measured by INAA and CNAA. The concentrations range from 10^–4 g/g to 10^–10 g/g. The REE patterns of biotite, muscovite and tourmaline reported herein are highly fractionated from light to heavy REE. The REE concentrations in biotite and muscovite are high and indigenous. The pegmatite tourmalines contain low concentrations of REE. Variations in tourmaline REE patterns reflect the geochemical evolution of pegmatite melt/fluid system during crystallization.Work supported by the U. S. Department of Energy under Contract DE-AC06-76RLO 1830.     

On the synthesis of geometric isomers of 2-methyl (or phenyl)-4-[α-arylethylidene]-5(4H)-oxazolones

Several Z-2-methyl(or phenyl)-4-[α-arylethylidene]-5(4H)-oxazolones 3Z, 4Z were prepared. The results obtained were compared by diazomethane insertion and condensation procedure. In order to synthesize E-2-phenyl-4-[α-arylethylidene]-5(4H)-oxazolones 4E hydrogen bromide isomerization in dry benzene was used.     

Quinoid pigments of echinodermata III. Minor pigments of the sea urchin Strongylocentrotus nudus

Summary 1. 3-Acetyl-2,7-dihydroxy-6-methylnaphthazarin, not previously described, has been isolated from the test and needles of the sea urchinStronglyocentrotus nudus.2. The pigments of this sea urchin have been shown to include 2,7-dihydroxynaphthazarin and spinochrome E.3. A number of minor pigments forming naphthazarin derivatives has been isolated. One of them is connected with spinochrome C by mutual transformations.The subject matter of the present paper was given in part at the All-Union Conference on Biological Resources of the Seas of the Far East (Vladivostok, 1975).Pacific Ocean Institute of Bioorganic Chemistry, Far Eastern Scientific Center of the Academy of Sciences of the USSR, Vladivostok. Translated from Khimiya Prirodnykh Soedinenii, No. 2, pp. 202–207, March–April, 1977.