The photoionisation of propargylene and diazopropyne

The photoionisation of the C(3)H(2) isomer propargylene was studied using synchrotron radiation and coincidence techniques. An adiabatic ionisation energy (IE(ad)) of 8.99 ± 0.02 eV was determined. The precursor diazopropyne was investigated as well. Ionisation and appearance energies were measured.     

Designing an enzyme-based nanobiosensor using molecular modeling techniques

Nanobiosensors can be built via functionalization of atomic force microscopy (AFM) tips with biomolecules capable of interacting with the analyte on a substrate, and the detection being performed by measuring the force between the immobilized biomolecule and the analyte. The optimization of such sensors may require multiple experiments to determine suitable experimental conditions for the immobilization and detection. In this study we employ molecular modeling techniques to assist in the design of nanobiosensors to detect herbicides. As a proof of principle, the properties of acetyl co-enzyme A carboxylase (ACC) were obtained with molecular dynamics simulations, from which the dimeric form in an aqueous solution was found to be more suitable for immobilization owing to a smaller structural fluctuation than the monomeric form. Upon solving the nonlinear Poisson-Boltzmann equation using a finite-difference procedure, we found that the active sites of ACC exhibited a positive surface potential while the remainder of the ACC surface was negatively charged. Therefore, optimized biosensors should be prepared with electrostatic adsorption of ACC onto an AFM tip functionalized with positively charged groups, leaving the active sites exposed to the analyte. The preferential orientation for the herbicides diclofop and atrazine with the ACC active site was determined by molecular docking calculations which displayed an inhibition coefficient of 0.168 μM for diclofop, and 44.11 μM for atrazine. This binding selectivity for the herbicide family of diclofop was confirmed by semiempirical PM6 quantum chemical calculations which revealed that ACC interacts more strongly with the herbicide diclofop than with atrazine, showing binding energies of -119.04 and +8.40 kcal mol(-1), respectively. The initial measurements of the proposed nanobiosensor validated the theoretical calculations and displayed high selectivity for the family of the diclofop herbicides.     

A study on 210Po activity concentration in soil at different depths along coastal Kerala

The paper presents systematic studies on the vertical profiles of ²¹⁰Po, an important decay product of ²³⁸U, in soils along coastal Kerala. Soil samples collected from different depth intervals 0–10, 10–20, 20–30 cm were analyzed for ²¹⁰Po activity concentration by radiochemical methods. The activity ²¹⁰Po in soil samples were counted using a ZnS(Ag) alpha scintillation counting system. The mean values of activity concentrations of ²¹⁰Po in soil of various depths were found to be 8.66, 5.63 and 4.95 Bq kg⁻¹ for depth intervals of 0–10, 10–20 and 20–30 cm, respectively. The overall activity concentration of ²¹⁰Po in soil was found to vary from 2.26 ± 0.19 to 14.02 ± 0.12 Bq kg⁻¹ with a mean value of 6.43 Bq kg⁻¹. Maximum activity concentration was found in soil samples of Kollam region with the mean value of 10.08 ± 0.92 Bq kg⁻¹. The activity of ²¹⁰Po was found to be comparatively high in surface soil. The variation of ²¹⁰Po activity concentration with organic matter contents was studied. ²¹⁰Polonium activity concentration was found to increase with increasing organic matter content.     

Photoionization of propargyl and bromopropargyl radicals: a threshold photoelectron spectroscopic study

In this Article, we present mass-selected threshold photoelectron spectra of propargyl as well as the 1- and 3-bromopropargyl radicals. The reactive intermediates were produced by flash pyrolysis of suitable precursors and ionized by VUV synchrotron radiation. The TPES of the propargyl radical was simulated using data from a recent high-level computational study. An ionization energy (IE) of 8.71 ± 0.02 eV was obtained, in excellent agreement with computations, but slightly above previous experimental IEs. The pyrolysis of 1,3-dibromopropyne delivers both 1- and 3-bromopropargyl radicals that can be distinguished by their different ionization energies (8.34 and 8.16 eV). To explain the vibrational structure, a Franck-Condon simulation was performed, based on DFT calculations, which can account for all major spectral features. Bromopropargyl photoionizes dissociatively beginning at around 10.1 eV. Cationic excited states of 1- and 3-bromopropargyl were tentatively identified. The dissociative photoionization of the precursor (1,3-dibromopropyne) was also examined, delivering an AE(0K) (C(3)H(2)Br(+)/C(3)H(2)Br(2)) of 10.6 eV.     

Selected ion flow tube study of ion-molecule reactions of N(+)(3P) and Kr+ with C3 hydrocarbons propane, propene, and propyne

Reactions of (14)N(+)((3)P), (15)N(+)((3)P), and Kr(+) with propane, propene, and propyne were studied using the selected ion flow tube, SIFT, technique. Thermal rate constants in all N(+)/C(3) systems were k = (2 ± 0.4) × 10(-9) cm(3) molecule(-1) s(-1), close to the collisional rate constants. With propane and propene, only hydrocarbon ions were found among the products of reactions with N(+); in propyne about 15% of the products were N-containing ions (C(3)H(2)N(+), C(2)H(4)N(+), C(2)H(3)N(+), C(2)H(2)N(+)), and the rest were hydrocarbon ions. A comparison with product ions from electron transfer between Kr(+) (of recombination energy similar to that for N(+)((3)P)) and the C(3) hydrocarbons and further analysis of the results led to an estimation of an approximate ratio of electron transfer vs hydride-ion transfer reactions leading to the hydrocarbon product ions: in propane the ratio was 2:1, in propene 3:1, and in propyne 5:1. A fraction of product ions resulted from reactions leading to the excited neutral product N*.     

Enantiomeric resolution of (±)-licarin A by high-performance liquid-chromatography using a chiral stationary phase

(±)-Licarin A (1), a neolignan obtained by the oxidative coupling reaction of isoeugenol, had in this study its enantiomers resolved. A novel, quick and efficient enantiomeric resolution of 1 was directly performed by chiral high-performance liquid chromatography (HPLC-PDA) protocol (CHIRALPACK^® AD column; 9:1 (v/v) n-hexane:2-propanol; 1.0 mL/min). This method provided a chromatogram profile with a well-resolved peak separation. After isolation of each enantiomer with ee > 99.9%, they were analysed in a polarimeter. Compound 2, which showed a retention time (t_r) of 12.13 min, was the (+)-enantiomer and compound 3 (t_r = 18.90 min) was the (−)-enantiomer.     

HPLC analysis of supercritical carbon dioxide and compressed propane extracts from Piper amalago L. with antileishmanial activity

Piper amalago L. leaves were extracted with supercritical carbon dioxide and compressed propane under different conditions, and with chloroform by the conventional maceration method. These methods were compared for the pyrrolidine alkaloid content. Supercritical carbon dioxide (SFE-CO?) at 313 K and 12.55 MPa showed the highest selectivity for the main compound (600.53 mg/g of extract). A gradient high-performance liquid chromatography (HPLC) method was developed and validated to quantify the alkaloid N-[7-(3',4'-methylenedioxyphenyl)-2(Z),4(Z)-heptadienoyl]pyrrolidine in the extracts. The HPLC method showed linearity, precision and accuracy, allowing the quantitative analysis of the alkaloid in all the samples. All the extracts were tested against the promastigote and intracellular amastigote forms of Leishmania amazonensis. The antileishmanial activity was evaluated in terms of inhibitory concentration for 50% of protozoa (IC??). The cytotoxicity was also evaluated against J774A1 macrophages, and the cytotoxic concentrations for 50% of macrophages were obtained (CC??). The SFE-CO? (313 K; 12.55 MPa) extract showed the highest antileishmanial activity with the following IC?? values of 16 and 7 μg/mL against the promastigotes and intracellular amastigotes forms, respectively. The extract showed low cytotoxicity with a CC?? value of 93 μg/mL.     

A Spectroscopic Validation of the Improved Lennard–Jones Model

The Lennard–Jones (LJ) and Improved Lennard–Jones (ILJ) potential models have been deeply tested on the most accurate CCSD(T)/CBS electronic energies calculated for some weakly bound prototype systems. These results are important to plan the correct application of such models to systems at increasing complexity. CCSD(T)/CBS ground state electronic energies were determined for 21 diatomic systems composed by the combination of the noble gas atoms. These potentials were employed to calculate the rovibrational spectroscopic constants, and the results show that for 20 of the 21 pairs the ILJ predictions agree more effectively with the experimental data than those of the LJ model. The CCSD(T)/CBS energies were also used to determine the β parameter of the ILJ form, related to the softness/hardness of the interacting partners and controlling the shape of the potential well. This information supports the experimental finding that suggests the adoption of β≈9 for most of the systems involving noble gas atoms. The He-Ne and He-Ar molecules have a lifetime of less than 1ps in the 200–500 K temperature range, indicating that they are not considered stable under thermal conditions of gaseous bulks. Furthermore, the controversy concerning the presence of a “virtual” or a “real” vibrational state in the He2 molecule is discussed.     

Landau quantization in the spinning cosmic string spacetime

We analyze the quantum phenomenon arising from the interaction of a spinless charged particle with a rotating cosmic string, under the action of a static and uniform magnetic field parallel to the string. We calculate the energy levels of the particle in the non-relativistic approach, showing how these energies depend on the parameters involved in the problem. In order to do this, we solve the time independent Schrödinger equation in the geometry of the spinning cosmic string, taking into account that the coupling between the rotation of the spacetime and the angular momentum of the particle is very weak, such that makes sense to apply the Schrödinger equation in a curved background whose metric has an off diagonal term which involves time and space. It is also assumed that the particle orbits sufficiently far from the boundary of the region of closed timelike curves which exist around this topological defect. Finally, we find the Landau levels of the particle in the presence of a spinning cosmic string endowed with internal structure, i.e., having a finite width and uniformly filled with both material and vacuum energies.     

Modeling of unidirectional blood flow in microvessels with effects of shear-induced dispersion and particle migration

A cell-free layer, adjacent to microvessel walls, is present in the blood flow in the microcirculation regime. This layer is of vital importance for the transport of oxygen-saturated red cells to unsaturated tissues. In this work, we first discuss the physics of formation of this cell-free layer in terms of a balance between the shear-induced dispersion and particle migration. To this end, we use high-viscosity drops as prototypes for cells, and discuss our results in terms of physical parameters such as the viscosity ratio and the capillary number. We also provide a short-time analysis of the transient drift-dispersion equation, which helps us better explain the formation process of the cell-free layer. Moreover, we present models for investigating the blood flow in two different scales of microcirculation. For investigating the blood flow in venules and arterioles, we consider a continuous core-flow model, where the core-flow solution is considered to be a Casson fluid, surrounded by a small annular gap of Newtonian plasma, corresponding to the cell-free layer. We also propose a simple model for smaller vessels, such as capillaries, whose diameters are of a few micrometers. In this lower-bound limit, we consider a periodic configuration of aligned, rigid, and axi-symmetric cells, moving in a Newtonian fluid. In this regime, we approximate the fluid flow using the lubrication theory. The intrinsic viscosity of the blood is theoretically predicted, for both the lower and upper-bound regimes, as a function of the non-dimensional vessel diameter, in good agreement with the previous experimental works. We compare our theoretical predictions with the experimental data, and obtain qualitatively good agreement with the well-known Fåhræus-Lindqvist effect. A possible application of this work could be in illness diagnosis by evaluating changes in the intrinsic viscosity due to blood abnormalities.