Putting a brake on an autonomous DNA nanomotor

A strategy was developed to reversibly switch on/off an autonomous DNA nanomotor that contains a DNA enzyme. The multiple RNA cleavage of the DNAzyme powered the motor to move, and a strand displacement mechanism provided the basis for a reversible brake to the motor.     

Characterization of dynamic and steady-state protein phosphorylation using a fluorescent phosphoprotein gel stain and mass spectrometry

Protein phosphorylation plays a vital role in the regulation of most aspects of cellular activity, being key to propagating messages within signal transduction pathways and to modulating protein function. Pro-Q Diamond phosphoprotein gel stain is suitable for the fluorescence detection of phosphoserine-, phosphothreonine-, and phosphotyrosine-containing proteins directly in sodium dodecyl sulfate (SDS)-polyacrylamide gels. The technology is especially appropriate for profiling steady-state and dynamic phosphorylation on a proteome-wide scale, as demonstrated through detection of the native phosphorylation of cardiac mitochondrial phosphoproteins and changes in this profile arising from the activity of a protein kinase. For example, Pro-Q Diamond phosphoprotein gel stain was employed to demonstrate that among the 46 subunits of the mitochondrial respiratory chain complex, NADH:ubiquinone oxidoreductase (complex I), a 42 kDa subunit is phosphorylated in the steady-state. However, exposure of mitochondria to cAMP-dependent protein kinase increases phosphorylation of this 42 kDa subunit and results in de novo phosphorylation of an 18 kDa subunit as well. Since Pro-Q Diamond dye binds to phosphorylated residues noncovalently, the staining technology is fully compatible with modern microchemical analysis procedures, such as peptide mass profiling by matrix assisted laser desorption/ionization-time of flight (MALDI-TOF) mass spectrometry and post-source decay analysis of peptide phosphorylation.     

Liposome induced self-assembly of gold nanoparticles into hollow spheres

Gold nanoparticles were prepared by the reduction of [(C7H15)4N]+ [AuCl4]- with 3,4-ethylenedioxythiophene (EDOT) as reductant in toluene solution. The employed stabilizers include 3,3'-thiodipropionic acid (TDPA), 1-dodecanethiol (DDT), (+/-)-10-camphorsulfonic acid (CSA), and 11-mercaptoundecanoic acid (MUA). The reaction processes were tracked by UV-vis and FT-IR spectroscopy, and the as-prepared gold nanoparticles were characterized by scanning electron microscopy, transmission electron microscopy, energy-dispersive spectroscopy, and X-ray photoelectron spectroscopy measurements. When TDPA and MUA, which possess both -S- and -COOH groups, were used as the stabilizer in the preparation, the as-prepared nanoparticles could self-assemble into hollow spheres. While when DDT with a -SH group or CSA with a -SO3H group was used as the protecting agents, only discrete gold nanoparticles were observed. The results show that the groups of both -S- and -COOH in the stabilizer play an important role in forming the hollow nanospheres. It is proposed that the formation mechanism of the hollow spheres is a liposome that formed between -COO- and [(C7H15)4 N]+ could act as a template to induce the self-assembly of the gold nanoparticles into the hollow spheres.     

Electrospray ionization quadrupole time-of-flight and matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometric analyses to solve micro-heterogeneity in post-translationally modified peptides from Phoneutria nigriventer (Aranea, Ctenidae) venom

Previous studies of the fractionated venom of the Brazilian armed spider Phoneutria nigriventer, obtained by gel filtration, have demonstrated the presence of a fraction PhM, a pool of small peptides (up to 2000 Da) that provoke contractions in smooth muscle of guinea pig ileum. Initial attempts to sequence these peptides were largely unsuccessful because of the low purification yield and the fact that the majority seemed to be blocked at their N-termini. In the present work, analysis of this venom fraction by mass spectrometry has revealed the existence of a highly complex mixture of peptides with molecular weights corresponding to those observed for the muscle-active peptides previously described (800-1800 Da). These peptides appear to be a family of isoforms with some particular features. The amino acid sequences of 15 isoforms have been determined by tandem mass spectrometry (MS/MS) using both electrospray ionization quadrupole time-of-flight mass spectrometry (ESI-Q/ToFMS) and matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometry (MALDI-ToF/ToFMS). These molecules contain post-translational modifications such as proteolysis and C-terminal amidation, which combine to generate additional isoforms. All the isoforms sequenced in this study possess an N-terminal pyroglutamic acid residue. A search for sequence similarities with other peptides in databanks revealed that these peptides are structurally related to the tachykinins, a family of neuro-hormone peptides. The data obtained in this study will be essential for the subsequent steps of this research, the synthesis of these peptides and pharmacological characterization of their biological activity.     

Watching photoinduced chemistry and molecular energy flow in solution in real time

Energized molecules are the essential actors in chemical transformations in solution. As the rearrangement of bonds requires a movement of nuclei, vibrational energy is often the driving force for a reaction. Vibrational energy can be redistributed within the "hot" molecule, or relaxation can occur when molecules interact. Both processes govern the rates, pathways, and quantum yields of chemical transformations in solution. Unfortunately, energy transfer and the breaking, formation, and rearrangement of bonds take place on ultrafast timescales. This Review highlights experimental approaches for the direct, ultrafast measurement of photoinduced femtochemistry and energy flow in solution. In the first part of this Review, we summarize recent experiments on intra- and intermolecular energy transfer. The second part discusses photoinduced decomposition of large organic peroxides, which are used as initiators in free radical polymerization. The mechanisms and timescales of their decarboxylation determine the initial steps of polymerization and the microstructure of the polymer product.     

Diastereoselective hydroformylation of 2-substituted allylic o-DPPB-esters-on the origin of 1,2-asymmetric induction

2-Substituted secondary alcohol o-DPPB esters (o-DPPB=ortho-diphenylphosphanylbenzoyl) have been prepared and their o-DPPB-directed diastereoselective hydroformylation examined. It was found that the diastereoselectivity increased as a function of the steric demand of the substituents both at the stereogenic center and in the alkene 2-position. Hydrolytic cleavage of the o-DPPB group afforded-via the lactols 29-the corresponding lactones 30, the relative configurations of the vicinal stereogenic centers of which were ascertainable by 2D-NOESY spectroscopy. In addition, a crystal structure analysis of the hydroformylation product 2 d provided further confirmation of the relative configuration. Replacement of the ester carbonyl group of the o-DPPB by a methylene unit resulted in significantly worse diastereoselectivity in the course of the hydroformylation (34-->35), which indicates a decisive role for the ester carbonyl function. All the experimental observations were combined in a model of the origin of the 1,2-asymmetric induction during the title reaction. The key feature is the consideration of diastereomeric trigonal-bipyramidal rhodium-hydrido-olefin complexes I and II, capable on the basis of the Hammond postulate of acting as good models for the transition states of the selectivity-determining hydrometalation step. Investigation of these complexes by force-field methods indicated good correlation between theoretically predicted and experimentally determined diastereoselectivities.     

环境水中甲基对硫磷、对硫磷和辛硫磷农药残留的SPE-HPLC分析

采用离线固相萃取 (SPE)富集 -高效液相色谱(HPLC)分离和紫外分光光度法检测 ,对环境水中甲基对硫磷、对硫磷和辛硫磷3种有机磷农药进行分析;固相萃取用C18 萃取柱 ,用甲醇洗脱 ,高效液相色谱分离以Shim_PackCLCODS柱(150mm×4.6mmid,5μm)为分离柱 ,流动相为甲醇 -水(体积比70∶30) ,紫外检测波长为280nm;该法稳定可靠 ,回收率高     

Effect of pressure on coupled electronic ground and excited states determined from luminescence spectra of trans-dioxorhenium(V) complexes

Pressure-dependent luminescence spectra of trans-dioxo complexes of rhenium(V) with ancillary ethylenediamine ligands exhibit resolved vibronic structure in the O=Re=O symmetric stretching mode at room temperature. The intensity distribution within the vibronic progression changes with pressure, leading to band shapes that are also pressure-dependent. These spectroscopic features arise from coupled electronic states and depend on the energy differences between ground and excited states, which vary by 2500 cm(-1) for the three complexes with ethylenediamine, tetramethylethylenediamine, and tetraethylethylenediamine ancillary ligands. We describe the pressure-dependent vibronic structure and band shapes with anharmonic adiabatic potential energy surfaces for the ground states of all complexes. The calculated spectra reveal the pressure dependence of the energies of electronic origins, luminescence band maximums, offsets between ground- and emitting-state potential minimums, and vibrational frequencies. The largest pressure effects are observed where the coupled electronic states are close in energy.