Excited-state energy-transfer dynamics in self-assembled triads composed of two porphyrins and an intervening Bis(dipyrrinato)metal complex

The synthesis and characterization of various triads composed of a linear array of two zinc porphyrins joined via an intervening bis(dipyrrinato)metal(II) complex are reported. The preparation exploits the facile complexation of dipyrrins with divalent metal ions to give bis(dipyrrinato)metal(II) complexes [abbreviated (dp)(2)M]. Copper(II) and palladium(II) chelates of dipyrrins (available by oxidation of dipyrromethanes) were prepared in 50-80% yield. A one-flask synthesis of bis(dipyrrinato)zinc(II) complexes was developed by oxidation of a dipyrromethane with DDQ or p-chloranil in the presence of Zn(OAc)(2).2H(2)O in THF ( approximately 80% yield). Three routes were developed for preparing porphyrin-dipyrrins: (1). Suzuki coupling of a boronate-substituted zinc porphyrin (ZnP) and bis[5-(4-iodophenyl)dipyrrinato]Pd(II) to give the (ZnP-dp)(2)Pd triad (50% yield), followed by selective demetalation of the (dp)(2)Pd unit by treatment with 1,4-dithiothreitol under neutral conditions (71% yield); (2). oxidation of a porphyrin-dipyrromethane with p-chloranil in the presence of Zn(OAc)(2).2H(2)O followed by chromatography on silica gel (71% yield); and (3). condensation of a dipyrrin-dipyrromethane and a dipyrromethane-dicarbinol under InCl(3) catalysis followed by oxidation with DDQ (10-16% yield). Four triads of form (ZnP-dp)(2)Zn were prepared in 83-97% yield by treatment of a porphyrin-dipyrrin with Zn(OAc)(2).2H(2)O at room temperature. Free base dipyrrins typically absorb at 430-440 nm, while the bis(dipyrrinato)metal complexes absorb at 460-490 nm. The fluorescence spectra/yields and excited-state lifetimes of the (ZnP-dp)(2)Zn triad in toluene show (1). efficient energy transfer from the bis(dipyrrinato)zinc(II) chromophore to the zinc porphyrins (98.5% yield), and (2). little or no quenching of the resulting excited zinc porphyrin relative to the isolated chromophore. Taken together, these results indicate that bis(dipyrrinato)zinc(II) complexes can serve as self-assembling linkers that further function as secondary light-collection elements in porphyrin-based light-harvesting arrays.     

Characterization of the 1st and 2nd EF-hands of NADPH oxidase 5 by fluorescence, isothermal titration calorimetry, and circular dichroism

Background

Superoxide generated by non-phagocytic NADPH oxidases (NOXs) is of growing importance for physiology and pathobiology. The calcium binding domain (CaBD) of NOX5 contains four EF-hands, each binding one calcium ion. To better understand the metal binding properties of the 1^st and 2^nd EF-hands, we characterized the N-terminal half of CaBD (NCaBD) and its calcium-binding knockout mutants.

Results

The isothermal titration calorimetry measurement for NCaBD reveals that the calcium binding of two EF-hands are loosely associated with each other and can be treated as independent binding events. However, the Ca²⁺ binding studies on NCaBD(E31Q) and NCaBD(E63Q) showed their binding constants to be 6.5 × 10⁵ and 5.0 × 10² M^-1 with ??Hs of -14 and -4 kJ/mol, respectively, suggesting that intrinsic calcium binding for the 1^st non-canonical EF-hand is largely enhanced by the binding of Ca²⁺ to the 2^nd canonical EF-hand. The fluorescence quenching and CD spectra support a conformational change upon Ca²⁺ binding, which changes Trp residues toward a more non-polar and exposed environment and also increases its ??-helix secondary structure content. All measurements exclude Mg²⁺-binding in NCaBD.

Conclusions

We demonstrated that the 1^st non-canonical EF-hand of NOX5 has very weak Ca²⁺ binding affinity compared with the 2^nd canonical EF-hand. Both EF-hands interact with each other in a cooperative manner to enhance their Ca²⁺ binding affinity. Our characterization reveals that the two EF-hands in the N-terminal NOX5 are Ca²⁺ specific.

Graphical abstract

     

Mesogenic dipyrrins-building blocks for the fabrication of fluorescent and metal-containing materials

A new class of mesogenic dipyrrins is reported and their use in the fabrication of fluorescent and metal-containing self assembling materials is demonstrated.     

H+ versus D+ transfer from HOD+ to CO2: bond-selective chemistry and the anomalous effect of bending excitation

Reactions of HOD(+) with CO(2) have been studied for HOD(+) in its ground state, and with one quantum of excitation in each of its vibrational modes: (001)--predominantly OH stretch, 0.396 eV; (010)--bend, 0.153 eV; and (100)--predominantly OD stretch, 0.293 eV. Integral cross sections and product recoil velocities were recorded for collision energies from threshold to 3 eV. The cross sections for both H(+) and D(+) transfer rise with increasing collision energy from threshold to ～1 eV, then become weakly dependent of the collision energy. All three vibrational modes enhance the total reactivity, but quite mode specifically. The H(+) transfer reaction is enhanced by OH stretch excitation, whereas OD stretch excitation has little effect. Conversely, the D(+) transfer reaction is enhanced by OD stretch excitation, while the OH stretch has little effect. Excitation of the bend strongly enhances both channels. The effects of the stretch excitations are consistent with previous studies of neutral HOD mode-selective chemistry, and can be at least qualitatively understood in terms of a late barrier to product formation. The fact that bend excitation produces the largest overall enhancement is surprising, because this is the lowest energy excitation, and is not obviously connected with the reaction coordinates for either H(+) or D(+) transfer. A rationalization in terms of the effects of water distortion on the potential surface is proposed.     

X-ray Crystal Structure of (CNSSS)2(M)2 (M = AsF6 −, SbF6 −, Sb2F11 −)

The crystal structures of (CNSSS)₂(AsF₆)₂, (CNSSS)₂(SbF6)₂, and two phases of (CNSSS)₂(Sb₂F₁₁)₂ have been determined. The AsF₆ ^?, SbF₆ ^?, and α-Sb₂F₁₁ ^? salts crystallize as reddish-brown plates whereas the β-Sb₂F₁₁ ^? salt crystallizes as green rods. The dication ^ß+SSSNCCNSSS^+ß (1²⁺) is the same in all four structures and consists of two 7π rings linked by a sp²-sp² C-C bond (1.462 Å in 1 (AsF₆)₂). The packing in the four structures is similar with stacks of dications along the a-axis and alternating sheets of dications and anions lying in the bc-plane. The differences in the dication-dication contacts is reflected in the variable temperature magnetic data.     

The effects of collision energy, vibrational mode, and vibrational angular momentum on energy transfer and dissociation in NO2+-rare gas collisions: an experimental and trajectory study

A combined experimental and trajectory study of vibrationally state-selected NO2+ collisions with Ne, Ar, Kr, and Xe is presented. Ne, Ar, and Kr are similar in that only dissociation to the excited singlet oxygen channel is observed; however, the appearance energies vary by approximately 4 eV between the three rare gases, and the variation is nonmonotonic in rare gas mass. Xe behaves quite differently, allowing efficient access to the ground triplet state dissociation channel. For all four rare gases there are strong effects of NO2+ vibrational excitation that extend over the entire collision energy range, implying that vibration influences the efficiency of collision to internal energy conversion. Bending excitation is more efficient than stretching; however, bending angular momentum partially counters the enhancement. Direct dynamics trajectories for NO2+ + Kr reproduce both the collision energy and vibrational state effects observed experimentally and reveal that intracomplex charge transfer is critical for the efficient energy transfer needed to drive dissociation. The strong vibrational effects can be rationalized in terms of bending, and to a lesser extent, stretching distortion enhancing transition to the Kr+ -NO2 charge state.     

'Pincer' pyridine dicarbene complexes of nickel and their derivatives. Unusual ring opening of a coordinated imidazol-2-ylidene

The reaction of NiBr2(DME), DME = 1,2-dimethoxyethane, with the pincer pyridine dicarbene ligands (C-N-C) ( 2) and (C-NMe-C) ( 2Me), (C-N-C = 2,6-bis-[(DiPP)imidazol-2-ylidene]pyridine, C-NMe-C = 2,6-bis-[(DiPP)imidazol-2-ylidene]-3,5-dimethylpyridine, DiPP = 2,6-diisopropylphenyl) gave the square planar complexes [Ni(C-N(Me)-C)Br]Br, 3.( Br)- and 3Me.( Br)- respectively. Transmetallation from [(C-NMe-C)2Ag2](Ag6I8), 6Me.( Ag6 I8)2- to NiBr2(DME) gave [Ni(C-NMe-C)Br](AgI2), 3Me.( AgI2)-. Reaction of 3.( Br)- with KPF6 resulted only in exchange of the ionic bromide, however the reaction of 3.( Br)- with AgBF4 in MeCN or AgOTf in THF resulted in the exchange of both coordinated and ionic bromides, giving rise to the square planar 4.( BF4)-2 and octahedral 5, respectively. In contrast, the reaction of 3Me.( AgI2)-, with excess AgOTf resulted in an unusual reverse transmetallation leading to 6Me.( OTf)-. The substitution of tmeda in Ni(CH3)2(tmeda), tmeda = N,N,N,N-tetramethylethylenediamine, by 2 produced the complex 7, in which ring opening of the heterocyclic imidazole ring of one of the NHC functional groups has taken place.     

Stepwise modification of titanium alkoxy chloride compounds by pyridine carbinol

The stepwise modifications of stoichiometric mixtures of titanium chloride (TiCl 4) and titanium iso-propoxide (Ti(OPr (i)) 4) by 2-pyridine methanol (H-OPy) led to the isolation of a systematically varied, novel family of compounds. The 3:1 reaction mixture of Ti(OPr (i)) 4:TiCl 4 yielded [Cl(OPr (i)) 2Ti(mu-OPr (i))] 2 ( 1). Modification of 1 with 1 and 2 equiv of H-OPy produced [Cl(OPr (i)) 2Ti(mu c-OPy)] 2 ( 2, where mu c = chelating bridge) and "(OPy) 2TiCl(OPr (i))" ( 3, not crystallographically characterized), respectively. Altering the Ti(OPr (i)) 4 to TiCl 4 stoichiometry to 1:1 led to isolation and identification of another dimeric species [Cl 2(OPr (i))Ti(mu-OPr (i))] 2 ( 4). Upon modification with 1 equiv of H-OPy, [Cl 2(OPr (i))Ti(mu c-OPy)] 2 ( 5) was isolated from toluene and (OPy)TiCl 2(OPr (i))(py) ( 6) from py. An additional equivalent of H-OPy led to the monomeric species (OPy) 2TiCl 2 ( 7). Because of the low solubility and similarity in constructs of these compounds, additional analytical data, such as the beryllium dome or BeD-XRD powder analyses, were used to verify the bulk samples, which were found to be in agreement with the single crystal structures.