Detection of conformational and net charge differences in DNA-protein complexes by quantitative electrophoresis on polyacrylamide-agarose copolymer gels

The Galactosidase repressor (GalR) of Escherichia coli modulates the expression of the gal operon by binding to two DNA operators, OE and O1. The OE and O1 elements are 16 bp pallindromic DNA sequences, differing in four of the base pairs. OE and O1 DNA fragments, both free and complexed with repressor, were analyzed by "quantitative gel electrophoresis". By the criteria of that method, applied to the linear Ferguson plots of both DNA fragments and the linear ranges of those of the DNA-GalR complexes, it was shown that the apparent size of DNA increases upon repressor binding. Moreover, this size increase is greater for the complex with the O1 operator than for the complex with the OE operator in the case that GalR is located in the center of a 155 bp DNA fragment. This is not the case when GalR is located in a peripheral position. By contrast with their size differences, the centrally located GalR-O1 and GalR-OE complexes appear to possess indistinguishable net surface charge densities as judged from the intercepts with the mobility axis. The larger size of the complex with centrally located O1 fragment, as compared with that bearing the OE fragment, is interpreted as being due to bending of the DNA-protein complex, since an authentically bent fragment of a plasmid with bent upstream activator sequence also exhibits a larger slope of the Ferguson plot, and thus the larger size, than predicted on the basis of its DNA chain length (bp).(ABSTRACT TRUNCATED AT 250 WORDS)     

Automated multiresidue analysis of pesticides in olive oil by on-line reversed-phase liquid chromatography-gas chromatography using the through oven transfer adsorption-desorption interface

A multiresidue, automated and rapid method for the determination of pesticide residues in olive oil is presented. The method employs the through oven transfer adsorption-desorption interface for the on-line coupling of reversed-phase liquid chromatography and gas chromatography. In this fully automated system, olive oil is directly injected with no sample pre-treatment step other than filtration. Methanol-water is used as eluent in the liquid chromatography pre-separation step. The selected liquid chromatography fraction containing the pesticides is automatically transferred to the gas chromatography. The liquid chromatography column flow during elution is different from the flow during the transfer. Using a flame ionisation detector, pesticide detection limits varied from 0.1 to 0.3 mg/l.     

Relativistic molecular wavefunctions: XeF2

A new method is presented to calculate binding energies and eigenfunctions for molecules, using the relativistic Dirac hamiltonian. A numerical basis set of four component wavefunctions is obtained from atom-like Dirac-Slater wavefunctions. A discrete variational method has been developed and applied to the linear XeF₂ molecule.     

Molecular orbital study of molecular nitrogen fixation

The model systems of molecular nitrogen fixation [N₂ + H]?, [N₂ + H]⁺, [N₂ + H]^?, [N₂ + H₂], [N₂ + H₂]⁺, and [N₂ + H₂]^? were studied by the semiempirical INDO method. The study was based on the formal analogy between the catalytic reactions and the photochemical, radical, and ionic reactions on the other side. Symmetrical and donor-acceptor properties of necessary catalytic systems were proposed using the dependence of energy characteristics and electron structure on reaction coordinate. On the basis of this MO study we have proposed the appropriate symmetry types of catalysts for each of acceptable models of nitrogen fixation. For one of the proposed systems there was realised a model MO computation with explicit inclusion of atoms of transition metals (Fe, V).     

Thermochemical properties of benzoic acid derivatives VIII. Enthalpies of combustion and formation of o-, m-, and p- t-butylbenzoic acids

The enthalpies of formation in the crystalline state at 298.15 K of o-, m-, and p-t-butyl-benzoic acids have been determined by static-bomb calorimetry. Vapour-pressure determinations were made by the Knudsen-effusion technique and the sublimation enthalpies at the mean temperatures of the measurement ranges have been derived for the three acids. The values obtained are:

     

76.

Massenspektren neuer Phloroglucide,insbesondere solcher mit Valerylseitenketten     

M. Lounasmaa  C.-J. Widn  T. Reichstein 《Helvetica chimica acta》1973,56(3):1133-1144

Mass spectra of phloroglucinol derivatives recently isolated from African Dryopteris species are presented. Phloroglucides with n-valeryl side chain were found in these ferns for the first time. In the mass spectra they show strong peaks corresponding to loss of propene (C₃H₆) produced by McLafferty rearrangement, as shown in model compounds. Aside of the rottleron change (discussed formerly) this must be considered in order to avoid wrong interpretation, particularly when mass spectra are used to analyse mixtures of homologues, as usually present in the plants. If valeryl side chains are present other methods must be used therefore to measure the amount or show the absence of lower homologues with acetyl side chains.     

77.

Aktivierungsanalytische Untersuchungen an hochreinem Silicium     

W. Gebauhr  J. Martín und E Haas 《Fresenius' Journal of Analytical Chemistry》1964,200(4):266-278

Zusammenfassung Zur Aktivierungsanalyse von hochreinem Silicium wurden die vermuteten Verunreinigungen in 3 Gruppen entsprechend der Halbwertszeit ihrer zur Bestimmung herangezogenen Radionuklide zusammengefaßt und für diese Gruppen chemisch-analytische Trennungsgänge ausgearbeitet. Damit war es möglich, in relativ geringen Probemengen etwa 30 Elemente zu bestimmen. Die dargelegten Ergebnisse liegen durchweg im oder unter dem ppb-Bereich (=10^–7 %).Zur Lokalisierung einiger Verunreinigungen wird die Autoradiographie herangezogen. Einige Aufnahmen zeigen, daß dieses Verfahren auch bei Vorhegen äußerst geringer Aktivitäten noch wertvolle Aussagen zu liefern vermag.

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Summary For the activation analysis of high-purity silicon the supposed impurities are divided into 3 groups corresponding to the half-lives of the radionuclides belonging to the impurities. For these groups chemoanalytical separation schemes are developed. With this technique it was possible to determine about 30 elements in small samples. The results given are in or below the ppb-level.For localisation of the impurities autoradiography is used. Some of the pictures taken show, that also with very low activities valuable results can be obtained.

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Zum Schlu mu die freundliche Hilfe erwähnt werden, die wir an den deutschen Reaktorstationen bei der Durchuürung der Bestrahlung rehalten haben. So sind wir der Reaktorstation Garching, insbesondere den Harren Dr. Köhler und Rau zu auerordentlichem Dank für die stats gewährte Unterstüzung bei der Bestrahlung der großen Zahl der Proben verpflichtet. — Die Analyse der kurzlebigen Radionuklide verlangte das Arbeiten direkt am Reaktor. Dank dem freundlichen Entgegenkommen der Herren Prof. Dr. E. Fischer und Dr. Röbert konnten wir dieses in einem Laboratorium der Reaktorstation Geesthacht durchführen, wobei wir auch den Herren Braun und Hauser für ihre bereitwillige Unterstützung zu danken haben.Schließlich sei Herrn Dr. Brandt für die Entwicklung der erwähnten Formel auch an dieser Stelle nochmals gedankt.

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In gekürzter Form anläßlich der Tagung der Fachgruppe: Kern-, Radio- und Strahlenchemie der Gesellschaft Deutscher Chemiker in Heidelberg am 10. 9. 1963 vorgetragen.     

78.

An nmr study of conformational exchange in some ketone-BF₃ and ether-BF₃ adducts     

J.S. Hartman  P. Stilbs  S. Forsén 《Tetrahedron letters》1975,16(40):3497-3500

     

79.

Synthesis and spectral properties of 2,3-dihydro-4-(para-substituted-phenyl)-7-[(o-, m-, and p-substituted)phenoxy]-1H-1,5-benzodi-azepine-2-thiones     

Eduardo CortS Corts  Carlos M. Alcocer Castrejn 《Journal of heterocyclic chemistry》1997,34(6):1809-1812

A series of twelve new 2,3-dihydro-4-(para-substituted-phenyl)-7-[(o-, m-, and p-substituted)phenoxy]-1H-1,5-benzodiazepine-2-thiones, which have potentially useful pharmacological properties, has been synthesized by condensing the 3,3-dimercapto-1-(para-substituted phenyl)-2-propen-1-one with 3,4-diaminophenyl-R-phenyl ethers. The structure of all products was corroborated by ir, ¹H-nmr, ¹³C-nmr and ms.     

80.

Microwave-assisted, solvent-free synthesis of 1-(α- or β-hydroxynaphthyl)-1,2,3,4-tetrahydroisoquinolines by the Mannich reaction     

István Szatmári 《Tetrahedron letters》2006,47(23):3881-3883

As a new extension of the Mannich reaction of naphthols, 1-(hydroxynaphthyl)-substituted 1,2,3,4-tetrahydroisoquinolines were synthesized by the nucleophilic addition of 1- or 2-naphthol to 3,4-dihydroisoquinolines under solvent-free conditions, using microwave irradiation. The additions to 3-methyl-6,7-dimethoxy-3,4-dihydroisoquinoline proved to be a highly diastereoselective processes, resulting in the cis isomers as the main or the only products.     

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	$\text{ΔH}{}_{\mathrm{f}}{}^{\mathrm{o}}\text{(c, 298.15 K)/kJ mol}{}^{\mathrm{?1}}$	$\text{ΔH}{}_{\mathrm{s}}\text{/kJ mol}{}^{\mathrm{?1}}$
o-t-butylbenzoic acid	476.2 ± 1.9	99.8 ± 0.4	(at 314.6 K)
m-t-butylbenzoic acid	504.3 ± 1.6	103.0 ± 0.5	(at 326.5 K)
p-t-butylbenzoic acid	502.9 ± 1.7	103.8 ± 0.4	(at 334.1 K)

Massenspektren neuer Phloroglucide,insbesondere solcher mit Valerylseitenketten

Mass spectra of phloroglucinol derivatives recently isolated from African Dryopteris species are presented. Phloroglucides with n-valeryl side chain were found in these ferns for the first time. In the mass spectra they show strong peaks corresponding to loss of propene (C₃H₆) produced by McLafferty rearrangement, as shown in model compounds. Aside of the rottleron change (discussed formerly) this must be considered in order to avoid wrong interpretation, particularly when mass spectra are used to analyse mixtures of homologues, as usually present in the plants. If valeryl side chains are present other methods must be used therefore to measure the amount or show the absence of lower homologues with acetyl side chains.     

Aktivierungsanalytische Untersuchungen an hochreinem Silicium

Zusammenfassung Zur Aktivierungsanalyse von hochreinem Silicium wurden die vermuteten Verunreinigungen in 3 Gruppen entsprechend der Halbwertszeit ihrer zur Bestimmung herangezogenen Radionuklide zusammengefaßt und für diese Gruppen chemisch-analytische Trennungsgänge ausgearbeitet. Damit war es möglich, in relativ geringen Probemengen etwa 30 Elemente zu bestimmen. Die dargelegten Ergebnisse liegen durchweg im oder unter dem ppb-Bereich (=10^–7 %).Zur Lokalisierung einiger Verunreinigungen wird die Autoradiographie herangezogen. Einige Aufnahmen zeigen, daß dieses Verfahren auch bei Vorhegen äußerst geringer Aktivitäten noch wertvolle Aussagen zu liefern vermag.

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Summary For the activation analysis of high-purity silicon the supposed impurities are divided into 3 groups corresponding to the half-lives of the radionuclides belonging to the impurities. For these groups chemoanalytical separation schemes are developed. With this technique it was possible to determine about 30 elements in small samples. The results given are in or below the ppb-level.For localisation of the impurities autoradiography is used. Some of the pictures taken show, that also with very low activities valuable results can be obtained.

---

---

Zum Schlu mu die freundliche Hilfe erwähnt werden, die wir an den deutschen Reaktorstationen bei der Durchuürung der Bestrahlung rehalten haben. So sind wir der Reaktorstation Garching, insbesondere den Harren Dr. Köhler und Rau zu auerordentlichem Dank für die stats gewährte Unterstüzung bei der Bestrahlung der großen Zahl der Proben verpflichtet. — Die Analyse der kurzlebigen Radionuklide verlangte das Arbeiten direkt am Reaktor. Dank dem freundlichen Entgegenkommen der Herren Prof. Dr. E. Fischer und Dr. Röbert konnten wir dieses in einem Laboratorium der Reaktorstation Geesthacht durchführen, wobei wir auch den Herren Braun und Hauser für ihre bereitwillige Unterstützung zu danken haben.Schließlich sei Herrn Dr. Brandt für die Entwicklung der erwähnten Formel auch an dieser Stelle nochmals gedankt.

---

In gekürzter Form anläßlich der Tagung der Fachgruppe: Kern-, Radio- und Strahlenchemie der Gesellschaft Deutscher Chemiker in Heidelberg am 10. 9. 1963 vorgetragen.     

Synthesis and spectral properties of 2,3-dihydro-4-(para-substituted-phenyl)-7-[(o-, m-, and p-substituted)phenoxy]-1H-1,5-benzodi-azepine-2-thiones

A series of twelve new 2,3-dihydro-4-(para-substituted-phenyl)-7-[(o-, m-, and p-substituted)phenoxy]-1H-1,5-benzodiazepine-2-thiones, which have potentially useful pharmacological properties, has been synthesized by condensing the 3,3-dimercapto-1-(para-substituted phenyl)-2-propen-1-one with 3,4-diaminophenyl-R-phenyl ethers. The structure of all products was corroborated by ir, ¹H-nmr, ¹³C-nmr and ms.     

Microwave-assisted, solvent-free synthesis of 1-(α- or β-hydroxynaphthyl)-1,2,3,4-tetrahydroisoquinolines by the Mannich reaction

As a new extension of the Mannich reaction of naphthols, 1-(hydroxynaphthyl)-substituted 1,2,3,4-tetrahydroisoquinolines were synthesized by the nucleophilic addition of 1- or 2-naphthol to 3,4-dihydroisoquinolines under solvent-free conditions, using microwave irradiation. The additions to 3-methyl-6,7-dimethoxy-3,4-dihydroisoquinoline proved to be a highly diastereoselective processes, resulting in the cis isomers as the main or the only products.