Water as an efficient medium for the synthesis of tetrahydro-β-carbolines via Pictet-Spengler reactions

A mild and efficient protocol for the Pictet-Spengler reaction in water using an acid catalyst has been described. The condensation of tryptophan, tryptamine, and N_b-benzyl tryptophan with different aldehydes having both electron-withdrawing and -donating substituents in the presence of a catalytic amount of TFA in water furnished tetrahydro-β-carbolines in good isolated yields. A salient feature of the water mediated Pictet-Spengler reaction was the general trend observed during the condensation of Trp-OMe and aryl/aliphatic aldehydes furnishing diastereomeric mixtures with a preference for the cis-isomer.     

Allowed transitions in silicon isoelectronic ions

Dipole‐allowed transitions have been studied for the first few members of the Si isoelectronic sequence. Transition energies, oscillator strengths, transition probabilities and quantum defect values have been estimated for the low‐ and high‐lying excited states of s and d symmetries up to the principal quantum number n=7 for these 3p open shell ions from P⁺ to Cr¹⁰⁺. Time‐dependent coupled Hartree–Fock (TDCHF) theory has been utilized to calculate such transition properties. Most of the results for transition energies, oscillator strengths, and transition probabilities for higher excited states are new. The transition energies for low‐lying excited states agree well with experimental data wherever available. © 2001 John Wiley & Sons, Inc. Int J Quantum Chem, 2001     

Thermal and photochemical reduction of aqueous chlorine by ruthenium(II) polypyridyl complexes

Studies are reported on the reactions of aqueous chlorine with a series of substitution-inert, one-electron metal-complex reductants, which includes [Ru(bpy)3]2+, [Ru(4,4'-Me2bpy)3]2+, [Ru(4,7-Me2phen)3]2+, [Ru(terpy)2]2+, and [Fe(3,4,7,8-Me4phen)3]2+. The reactions were studied by spectrophotometry at 25 degrees C in acidic chloride media at mu = 0.3 M. In general the reactions have the stoichiometry 2[ML3]2+ + Cl2-->2[ML3]3+ + 2Cl-. In the case of [Ru(bpy)3]2+, the reaction is quite photosensitive; the thermal reaction is so slow as to be practically immeasurable. The reactions of [Ru(4,4'-Me2bpy)3]2+ and [Ru(4,7-Me2phen)3]2+ are also highly photosensitive, giving pseudo-first-order rate constants that depend on the monochromator slit width in a stopped-flow instrument; however, the thermal rates are fast enough that they can be obtained by extrapolation of kobs to zero slit width. The reactions of [Ru(terpy)2]2+ and [Fe(3,4,7,8-Me4phen)3]2+ show no appreciable photosensitivity, allowing direct determination of their thermal rate laws. From the kinetic effects of pH, [Cl2]tot, and [Cl-] it is evident that all of the thermal rate laws have a first-order dependence on [ML3]2+ and on [Cl2]. The second-order rate constants decrease as Eo for the complex increases, consistent with the predictions of Marcus theory for an outer-sphere electron-transfer mechanism. Quantum yields at 460 nm for the reactions of [Ru(4,4'-Me2bpy)3]2+ and [Ru(4,7-Me2phen)3]2+ exceed 0.1 and show a dependence on [Cl2] indicative of competition among spontaneous decay of *Ru, nonreactive quenching by Cl2, and reactive quenching by Cl2.     

Mechanisms and kinetics of trisodium 2-hydroxy-1,1'-azonaphthalene-3,4',6-trisulfonate adsorption onto chitosan

Chitosan, a naturally abundant biopolymer, has widely been studied for metal adsorption from various solutions, but the extension of chitosan as an adsorbent to remove organic substances from water and wastewater has seldom been explored. In this study, the adsorption of an azo dye, trisodium 2-hydroxy-1,1'-azonaphthalene-3,4',6-trisulfonate (1), from aqueous solution onto the various degrees of deacetylated chitosan has been investigated. Equilibrium studies have been carried out to determine the capacity of chitosan for dye. The experimental data were analyzed using two isotherm correlations, namely, Langmuir and Freundlich equations. The linear correlation coefficients were determined for each isotherm and the Langmuir provided the best fit. The experimental adsorption isotherms were perfectly reproduced in the simulated data obtained from numerical analysis on the basis of the Langmuir model and the isotherm constants. Adsorption of (1) onto the chitosan flakes was found to be strongly depending on degrees of deacetylation in chitosan and temperatures. Significant amounts of (1) were adsorbed by chitosan 8B (higher degree of deacetylated chitosan), but the adsorption capacity was reduced remarkably with increasing solution temperatures. Thermodynamic parameters such as change in free energy (DeltaG), enthalpy (DeltaH), and entropy (DeltaS) were also determined. In addition, kinetic study indicated that the adsorption process mechanisms were both transport- and attachment-limited.     

Kinetic studies on the electron transfer between sulphur(IV) and an iron(III) oxime–imine complex

Electron transfer between [Fe^III(L²)]⁺ and sulphur(IV) has been proposed to proceed via an inner-sphere mechanism involving formation of a transient hydrogen-bonded intermediate between the acidic proton of SO₂ · xH₂O/HSO₃ ^– and the oximato oxygen of the coordinated ligand, providing the ready availability of the proton for the reduced complex. In the case of SO₃ ^2–, this is not possible and the reaction is believed to proceed via an outer-sphere scheme.     

Cleavage of the peptide bond of beta-alanyl-L-histidine (carnosine) induced by a Co(III)-amine complexes: reaction, structure and mechanism

Cleavage of the peptide bond occurs when beta]-alanyl-L-histidine (carnosine) reacts with [Co(tren)Cl2]+ (tren = tris(2-aminoethyl)amine) to give [Co(tren)(histidine)](2+) 1 and [Co(tren)(beta-alanine)](2+) 2. [Co(tren)(histidine)](2+) 1 crystallizes in the enantiomorphic space group P2(1)2(1)2(1) and 2 crystallizes in the P2(1)/c space group. The mechanism of the cleavage reactions were studied in detail for the precursor [Co(tren)Cl2]+ and [Co(trien)Cl2]+, which convert into [Co(tren)(OH)2]+/[Co(tren)(OH)(OH2)]2+ and [Co(trien)(OH)2]+/[Co(trien)(OH)(OH2)]2+ in water at basic pH (trien = 1,4,7,10-tetraazadecane). At a slightly basic pH, the initial coordination of the substrate (beta-alanyl-L-histidine) is by the carboxylate group for the reaction with [Co(tren)Cl2]+. This is followed by a rate-limiting nucleophilic attack of the hydroxide group at the beta-alanyl-L-histidine carbonyl group. In a strongly basic reaction medium substrate, binding of the metal was through carboxylate and amine terminals. On the other hand, for the reaction between [cis-beta-Co(trien)Cl2]+ and beta-alanyl-L-histidine, the initial coordination of the substrate takes place via an imidazole ring nitrogen, independently, and followed by a nucleophilic attack of the hydroxide group at the beta-alanyl-L-histidine carbonyl group. The circular dichroism spectrum for 1 suggests that a very small extent of racemization of the amino acid (L-histidine) takes place during the cleavage reaction between [Co(tren)Cl2]+ and beta-alanyl-L-histidine. Reaction between [cis-beta-Co(trien)Cl2]+ and beta-alanyl-L-histidine also causes cleavage of the peptide bond, producing a free beta-alanyl molecule and a cationic fragment [cis-alpha-Co(trien)(histidine)](2+) 3 that crystallizes in the optically active space group P2(1)2(1)2(1). Unlike the previous case an appreciable degree of racemization of the L-histidine takes place during the reaction between [cis-beta-Co(trien)Cl2]+ and beta-alanyl-L-histidine. Crystals containing L-histidine and D-histidine fragments in the [cis-alpha-Co(trien)(histidine)]2+ moiety were crystallographically documented by mounting a number of randomly selected crystals.     

Electrophoretic dynamics of large DNA stars in polymer solutions and gels

We have developed a procedure for synthesizing large stable branched DNA structures that enables visualization via fluorescence microscopy. Using this procedure we have synthesized large DNA stars and observed their electrophoretic behavior in polymer solutions and gels. In dilute polyacrylamide solutions, the DNA stars move as random coils and appear to experience only brief collisions with the polymer chains in solution. The effect of polymer solution concentration on the electrophoretic mobility of stars in the dilute regime is found to be in good accord with predictions of the transient entanglement coupling (TEC) model. In semidilute polymer solutions, the star arms extend in the field direction and drag the core through the matrix. The star arms form several U-shaped conformations as they collide and engage with polyacrylamide chains. The U-shaped conformations occasionally evolve into J-shaped conformations as the star arms slide off the matrix chains they engage during electrophoretic migration. In concentrated polymer solutions, the arms of the star extend and form V-shaped structures with the core as the apex. The arms then pull the core through the matrix. These V-shaped conformations are much longer-lived than U-shaped ones and, unlike the latter, do not transform to J-shaped conformations. In polyacrylamide and agarose gels, where matrix entanglements are fixed, DNA stars become trapped when entanglements with matrix molecules prevent the core from being pulled through the matrix by the extended arms. This trapping was observed at all gel concentrations and electric fields studied.     

Kinetic and mechanistic studies of the interaction of 2-mercapto pyridine with dichloro[1-alkyl-2-(arylazo)imidazole]palladium(II) complexes

Nucleophilic substitution of Pd(RaaiR′)Cl₂ [(RaaiR′ = 1-alkyl-2-(arylazo)imidazole, p-R-C₆H₄-N=N-C₃H₂NN-1-R′; where R = H(a)/ Me(b)/ Cl(c) and R′ = Et(1)/Bz(2)] with 2-Mercaptopyridine (2-SH-Py) in acetonitrile (MeCN) at 298 K, to form [Pd₂(2-S-Py)₄], has been studied spectrophotometrically under pseudo-first-order conditions and the analyses support the nucleophilic association path. The reaction follows the rate law, Rate = {k ₀ + k [2-SH-Py] ₀ ² }[Pd(RaaiR′)Cl₂]: first order in Pd(RaaiR′)Cl₂ and second order in 2-SH-Py. The rate of the reaction follows the order: Pd(RaaiEt)Cl₂ (1) < Pd(RaaiBz)Cl₂ (2) and Pd(MeaaiR′)Cl₂ (b) < Pd(HaaiR′)Cl₂ (a) < Pd(ClaaiR′)Cl₂ (c). External addition of Cl⁻ (LiCl) and HCl suppresses the rate (Rate ∝ 1/[Cl⁻]₀ & ∝1/[HCl]₀). The reactions have been studied at different temperatures (293–308 K) and activation parameters (Δ^‡ H° and Δ ^‡ S°) of the reactions were calculated from the Eyring plot and support the proposed mechanism.     

Metal complexes of pyrimidine-derived ligands — Part 6. Bischelates of cobalt(II), nickel(II) and monochelates of copper(II) with 3, 5-dimethyl-1-(4′, 6′-dimethyl-2′-pyrimidyl)pyrazole,a potential antitumour agent

Summary Cobalt(II), nickel(II) and copper(II) complexes of 3, 5-dimethyl-1-(4, 6-dimethyl-2-pyrimidyl)pyrazole (DPymPz) have been synthesized and characterized. Magnetic and electronic spectral features show that both [M(DPymPz)₂X₂]·nH₂O [M=cobalt(II) or nickel(II), X=Cl, Br, I, SCN, NO₃, ClO₄ or BF₄ andn=0 or 2] and [Cu(DPymPz)X₂(H₂O)₂] (X=Cl, Br or SCN) are essentially octahedral species. The i.r. spectra indicate that DPymPz is a neutral bidentate ligand being the pyrazolyl and one pyrimidyl ring nitrogen. The X is bonded to the central metal ion in a majority of the complexes.Part 5: N. Saha and D. Mukherjee,Polyhedron,5, 1317 (1986).