Mirror-image packing in enantiomer discrimination molecular basis for the enantioselectivity of B.cepacia lipase toward 2-methyl-3-phenyl-1-propanol

Synthetic chemists often exploit the high enantioselectivity of lipases to prepare pure enantiomers of primary alcohols, but the molecular basis for this enantioselectivity is unknown. The crystal structures of two phosphonate transition-state analogs bound to Burkholderia cepacia lipase reveal this molecular basis for a typical primary alcohol: 2-methyl-3-phenyl-1-propanol. The enantiomeric alcohol moieties adopt surprisingly similar orientations, with only subtle differences that make it difficult to predict how to alter enantioselectivity. These structures, along with a survey of previous structures of enzyme bound enantiomers, reveal that binding of enantiomers does not involve an exchange of two substituent positions as most researchers assumed. Instead, the enantiomers adopt mirror-image packing, where three of the four substituents at the stereocenter lie in similar positions. The fourth substituent, hydrogen, points in opposite directions.     

Exfoliated graphite nanoplatelets and gold nanoparticles based electrochemical sensor for determination of levodopa

This paper describes a rapid, accurate, and sensitive method for the determination of levodopa in a pharmaceutical sample using a glassy carbon electrode modified with a hybrid nanocomposite constituted of exfoliated graphite nanoplatelets dispersed in a suspension of gold nanoparticles in carboxymethylcelullose (AuNP-CMC-xGnP/GCE). The nanocomposite was characterized by scanning electron microscopy, transmission electron microscopy, UV-Vis spectroscopy, and zeta potential. Electrochemical characterization of the proposed sensor by cyclic voltammetry and electrochemical impedance spectroscopy indicated that the nanocomposite used for the electrode modification facilitated electron transfer. Using square-wave voltammetry (SWV) under optimized conditions (0.50% (m/v) of AuNP-CMC-xGnP, 0.1 mol L^?1 sulfuric acid, frequency 30 Hz, pulse amplitude 50 mV, and scan increment 6.0 mV), the calibration curve showed a linear range for levodopa from 5 to 50 μmol L^?1, with a limit of detection of 0.5 μmol L^?1. The sensor demonstrated good repeatability and electrode-to-electrode repeatability, with relative standard deviations of 2 and 4%, respectively. The proposed method was successfully applied to quantify levodopa in a pharmaceutical sample by SWV, showing good accuracy. Recoveries of 98 to 107% demonstrated that the method is suitable for practical applications. Therefore, the proposed sensor represents a useful tool for rapid and accurate determination of levodopa.     

Bridging the Gap between the Direct and Hydrocarbon Pool Mechanisms of the Methanol‐to‐Hydrocarbons Process

After a prolonged effort over many years, the route for the formation of a direct carbon?carbon (C?C) bond during the methanol‐to‐hydrocarbon (MTH) process has very recently been unveiled. However, the relevance of the “direct mechanism”‐derived molecules (that is, methyl acetate) during MTH, and subsequent transformation routes to the conventional hydrocarbon pool (HCP) species, are yet to be established. This important piece of the MTH chemistry puzzle is not only essential from a fundamental perspective, but is also important to maximize catalytic performance. The MTH process was probed over a commercially relevant H‐SAPO‐34 catalyst, using a combination of advanced solid‐state NMR spectroscopy and operando UV/Vis diffuse reflectance spectroscopy coupled to an on‐line mass spectrometer. Spectroscopic evidence is provided for the formation of (olefinic and aromatic) HCP species, which are indeed derived exclusively from the direct C?C bond‐containing acetyl group of methyl acetate. New mechanistic insights have been obtained from the MTH process, including the identification of hydrocarbon‐based co‐catalytic organic reaction centers.     

Structural motifs of DNA complexes in the gas phase

DNA duplexes are known to be quite stable in the condensed phase but recent mass spectrometry results have shown that DNA complexes are also stable (at least for a limited time) in the gas phase. However, very little is known about the overall shape of the complexes in a solvent-free environment and what factors influence that shape. In this article, we present recent ion mobility and molecular modeling results that address some issues concerning the gas-phase conformations of DNA duplexes. Examples include the effect of metal ions on Watson–Crick base pairing, investigating the onset of helicity in duplexes as a function of strand length, comparison of the stability of C·G and A·T base pairs, and examining the formation of quadruplex structures.     

The experimental electron density distribution in the complex of (E)-1,2-bis(4-pyridyl)ethylene with 1,4-diiodotetrafluorobenzene at 90 K

The experimental electron density of the donor-acceptor complex of (E)-1,2-bis(4-pyridyl)ethylene (bpe) with 1,4-diiodotetrafluorobenzene (F(4)DIB) at 90 K has been determined with the aspherical atom formalism and analyzed by means of the topological theory of molecular structure. The bpe and F(4)DIB molecules are connected by intermolecular I.N bonds into infinite 1D chains. F.H bonds link these chains together to form the crystal assembly. The topological analysis reveals that the Cbond;I bond is of the "closed shell" type. Its bond-critical properties run parallel to those found in metal-metal and metal-ligand bonds of organometallic compounds. The integrated net charges show that the I.N halogen bond has an essentially electrostatic nature. F.F, F.C, and C.C intermolecular interactions, for which a bond path was found, contribute to reinforce the crystal structure.     

Determination of nicarbazin and clopidol in poultry feeds by liquid chromatography

A rapid and very effective analytical procedure for the simultaneous liquid chromatographic determination of two coccidiostats, clopidol (CLOP) and nicarbazin (NICA), in poultry feeds was developed and tested. The ground feed samples were extracted using aqueous dimethylformamide after moistening with water. Co-extracted feed constituents were removed with a solid-phase extraction alumina-basic column and the eluates were directly analyzed on an ODS column (250x4.6 mm, 5 microm) with acetonitrile-0.01 M acetate buffer (pH 4.6) as eluent. UV detection of CLOP and the 4,4'-dinitrocarbanilide portion of NICA was carried out at 265 and 345 nm, respectively. The mean recovery from NICA spiked samples was 95% with a RSD of 4% in a concentration range of 2-150 mg/kg while for CLOP it was 98% with a RSD of 5% in a concentration range of 5-150 mg/kg. The limits of detection of NICA and CLOP in feed, based on a detector signal-to-noise ratio of 3, were estimated to be 1 mg/kg and 2.5 mg/kg, respectively, and the lowest levels tested in feeds by this procedure were 2 mg/kg and 5 mg/kg, respectively.     

Photoinduced N-demethylation of rufloxacin and its methyl ester under aerobic conditions

Irradiation of rufloxacin (RF) under aerobic conditions gives rise to N-demethylation of the piperazinyl ring, which is enhanced in aerated D2O. Two primary processes seem to be involved in RF N-demethylation: photoionization from 1RF and singlet oxygen generation from 3RF. Both processes may lead to the same key intermediates, namely, RF*+ and superoxide radical anion; coupling of these intermediates explains N-demethylation of RF via an iminium cation. Formation of the hydrated electron by a monophotonic process (with a quantum yield of 0.09) is detected along with 3RF (with a intersystem-crossing quantum yield phiISC = 0.36) by laser flash photolysis. Studies performed on RF methyl ester give qualitatively similar results.     

Atomic force microscopy evaluation of aqueous interfaces of immobilized hyaluronan

Hyaluronan (HA) was immobilized on aminated glass surfaces in three different ways: by simple ionic interaction and by covalent linking at low density and at full density. In agreement with previous reports, in vitro experiments show that the outcome of fibroblast adhesion tests is markedly affected by the details of the coupling procedure, suggesting that different interfacial forces are operating at the aqueous/HA interface in the three cases investigated. The interfacial properties of the HA-coated surfaces were probed by force-distance curves obtained with the atomic force microscope (AFM). This approach readily shows significant differences among the tested samples, which are directly related to the coupling strategy and to results of cell adhesion tests. In particular, the range of interaction between the tip and the surface is much lower when HA is covalently linked than when it is ionically coupled, suggesting a more compact surface structure in the former case. Increasing HA surface density minimizes the interaction force between the surface and the AFM tip, likely reflecting more complete shielding by the HA chains of the underlying substrate. In summary, these measurements clearly show the different nature of the aqueous interfaces tested, and underline the role of this analytical approach in the development and control of finely tuned biomaterial surfaces.     

Metal-catalyzed asymmetric oxidations mediated by optically pure furyl hydroperoxides

Metal-catalyzed asymmetric oxidations which rely on the use of commercially available t-butyl (TBHP) or cumyl hydroperoxides (CHP) and enantiopure ligands represent the majority of protocols reported to obtain enantiomerically enriched valuable compounds such as epoxides, sulfoxides, diols, etc. Herein, we review our recent results on the complementary and less studied oxidative approach based on the use of optically pure alkyl hydroperoxides as oxygen and chirality source. The synthetic sequence to enantiopure furyl hydroperoxides, easily accessible from ketones of the chiral pool is firstly described. Examples of metal-catalyzed asymmetric oxidations using these compounds for the production of enantiomerically enriched sulfoxides and epoxy alcohols are shown. The entire protocol is made more advantageous by recovering the optically pure alcohols during the purification procedure and recycling them for the one-step synthesis of the hydroperoxides.