The effect of annealing on the elastoplastic response of isotactic polypropylene

Four series of tensile loading-unloading tests are performed on isotactic polypropylene in the sub-yield domain of deformations at room temperature. In the first series, injection-molded specimens are used as produced, whereas in the other series the samples are annealed for 24 h at 120, 140 and 160 °C, which covers the low-temperature region and an initial part of the high-temperature region of annealing temperatures. A constitutive model is developed for the elastoplastic behavior of a semicrystalline polymer. The stress-strain relations are determined by five adjustable parameters that are found by fitting the experimental data. The effect of annealing is analyzed on the material constants.     

Novel Mg-organic reagents in organic synthesis. Cp2TiCl2 catalyzed intermolecular cyclomagnesiation of cyclic and acyclic 1,2-dienes using Grignard reagents

High-yield (>80%) catalytic intermolecular cyclomagnesiation of cyclic and acyclic allenes with the aid of Grignard reagents has been realized in the presence of Cp₂TiCl₂. The synthesized unsaturated bi- and tricyclic organomagnesium compounds (OMC) have been successfully converted in situ into thiophenes, unsaturated ketones, cyclic and acyclic hydrocarbons with high regio- and stereoselectivity.     

Ab initio study of the KrH+ photodissociation

The multireference spin-orbit configuration interaction method is employed to calculate potential energy curves for the ground and low-lying excited states of the KrH(+) cation. For the first time, the spin-orbit interaction is taken into account and electric dipole moments are computed for transitions to the states responsible for the first absorption continuum (A band) of KrH(+). On this basis, the partial and total absorption spectra in this energy range are obtained. It is shown that the A-band absorption is dominated by the parallel A (1)Sigma(+)<--X (1)Sigma(+) transition. In the low-energy part of the band (<83x10(3) cm(-1)) the absorption is mainly caused by the spin-forbidden b (3)Pi(0(+) )<--X (1)Sigma(+) excitation, while perpendicular transitions to the B (1)Pi and b (3)Pi(1) states are significantly weaker. The branching ratio Gamma for the photodissociation products is calculated and it is shown to increase smoothly from 0 in the red tail of the band to 1 at E>or=90x10(3) cm(-1). The latter value corresponds to the exclusive formation of the spin-excited Kr(+)((2)P(12)) ions, which may be used to obtain laser generation on the Kr(+)((2)P(12)-(2)P(32)) transition.     

Identification of Microorganisms by High Resolution Tandem Mass Spectrometry with Accurate Statistical Significance

Correct and rapid identification of microorganisms is the key to the success of many important applications in health and safety, including, but not limited to, infection treatment, food safety, and biodefense. With the advance of mass spectrometry (MS) technology, the speed of identification can be greatly improved. However, the increasing number of microbes sequenced is challenging correct microbial identification because of the large number of choices present. To properly disentangle candidate microbes, one needs to go beyond apparent morphology or simple ‘fingerprinting’; to correctly prioritize the candidate microbes, one needs to have accurate statistical significance in microbial identification. We meet these challenges by using peptidome profiles of microbes to better separate them and by designing an analysis method that yields accurate statistical significance. Here, we present an analysis pipeline that uses tandem MS (MS/MS) spectra for microbial identification or classification. We have demonstrated, using MS/MS data of 81 samples, each composed of a single known microorganism, that the proposed pipeline can correctly identify microorganisms at least at the genus and species levels. We have also shown that the proposed pipeline computes accurate statistical significances, i.e., E-values for identified peptides and unified E-values for identified microorganisms. The proposed analysis pipeline has been implemented in MiCId, a freely available software for Microorganism Classification and Identification. MiCId is available for download at http://www.ncbi.nlm.nih.gov/CBBresearch/Yu/downloads.html.

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Ab initio electron propagator calculations in molecular transport junctions: predictions of negative differential resistance

In this work we study current-voltage characteristics in transport molecular junctions with a 1,4-benzene dithiol molecule as a bridge by using different ab initio electron propagator methods such as OVGF and P3 which are both programs in a Gaussian software package. The current-voltage characteristics are calculated for different values of Fermi energy in various basis sets such as 6-311++G(p,d) and cc-pVDZ and are compared with the experimental data. A good agreement is found in almost the entire voltage range. In addition, the results of our calculations indicate that the accuracy of ab initio electron propagator methods is in the range of 0.2-0.3 eV. Since the computational methods are truly ab initio, implying no adjustable parameters, functions, or functionals, the theoretical predictions can be improved only by changing the model of a transport device. The current-voltage characteristics predict peaks, i.e., negative differential resistances, for the various values of Fermi energy. As shown, the origin of the negative differential resistances is related to the voltage dependences of overlap integrals for the active terminal orbitals, expansion coefficients of partial atomic wavefunctions in Dyson orbitals, and the voltage dependences of Dyson poles (ionization potentials). We find that two peak behavior in the current-voltage characteristics can be explained by the anharmonicity of potential energy surfaces. As a result of our studies, we predict that negative differential resistances can be experimentally found by changing a position of Fermi level, i.e., by using different metal electrodes coated by a gold atomic monolayer.     

An ab initio study of the CH3I photodissociation. I. Potential energy surfaces

The multireference spin-orbit (SO) configuration interaction (CI) method in its Lambda-S contracted SO-CI version is employed to calculate two-dimensional potential energy surfaces for the ground and low-lying excited states of CH3I relevant to the photodissociation process in its A absorption band. The computed equilibrium geometry for the X A1 ground state, as well as vibrational frequencies for the nu2 umbrella and nu3 symmetric stretch modes, are found to be in good agreement with available experimental data. The 3Q0+ state converging to the excited I(2P1/2o) limit is found to possess a shallow minimum of 850 cm(-1) strongly shifted to larger internuclear distances (RC-I approximately 6.5a0) relative to the ground state. This makes a commonly employed single-exponent approximation for analysis of the CH3I fragmentation dynamics unsuitable. The 4E(3A1) state dissociating to the same atomic limit is calculated to lie too high in the Franck-Condon region to have any significant impact on the A-band absorption. The computed vertical excitation energies for the 3Q1, 3Q0+, and 1Q states indicate that the A-band spectrum must lie approximately between 33,000 and 44,300 cm(-1), i.e., between 225 and 300 nm. This result is in very good agreement with the experimental findings. The lowest Rydberg states are computed to lie at >or=49,000 cm(-1) and correspond to the ...a(1)2n3a1(6sI) leading configuration. They are responsible for the vacuum ultraviolet absorption lines found experimentally beyond the A-band spectrum at 201.1 nm (49,722 cm(-1)) and higher.     

Ion mobility spectrometry—mass spectrometry performance using electrodynamic ion funnels and elevated drift gas pressures

The ability of ion mobility spectrometry coupled with mass spectrometry (IMS-MS) to characterize biological mixtures has been illustrated over the past eight years. However, the challenges posed by the extreme complexity of many biological samples have demonstrated the need for higher resolution IMS-MS measurements. We have developed a higher resolution ESI-IMS-TOF MS by utilizing high-pressure electrodynamic ion funnels at both ends of the IMS drift cell and operating the drift cell at an elevated pressure compared with that conventionally used. The ESI-IMS-TOF MS instrument consists of an ESI source, an hourglass ion funnel used for ion accumulation/injection into an 88 cm drift cell, followed by a 10 cm ion funnel and a commercial orthogonal time-of-flight mass spectrometer providing high mass measurement accuracy. It was found that the rear ion funnel could be effectively operated as an extension of the drift cell when the DC fields were matched, providing an effective drift region of 98 cm. The resolution of the instrument was evaluated at pressures ranging from 4 to 12 torr and ion mobility drift voltages of 16 V/cm (4 torr) to 43 V/cm (12 torr). An increase in resolution from 55 to 80 was observed from 4 to 12 torr nitrogen drift gas with no significant loss in sensitivity. The choice of drift gas was also shown to influence the degree of ion heating and relative trapping efficiency within the ion funnel.     

Luminescent Analysis of Blood Serum for Diagnostics of Pathological and Pre-Pathological States of Cancer Patients

Journal of Fluorescence - This study is devoted to the development of a methodological approach to mathematical analysis and data interpretation of blood serum phosphorescence intensity in cancer...