Attachment of Single-Stranded DNA to Certain SERS-Active Gold and Silver Substrates: Selected Practical Tips

Layers formed from single-stranded DNA on nanostructured plasmonic metals can be applied as “working elements” in surface–enhanced Raman scattering (SERS) sensors used to sensitively and accurately identify specific DNA fragments in various biological samples (for example, in samples of blood). Therefore, the proper formation of the desired DNA layers on SERS substrates is of great practical importance, and many research groups are working to improve the process in forming such structures. In this work, we propose two modifications of a standard method used for depositing DNA with an attached linking thiol moiety on certain SERS-active structures; the modifications yield DNA layers that generate a stronger SERS signal. We propose: (i) freezing the sample when forming DNA layers on the nanoparticles, and (ii) when forming DNA layers on SERS-active macroscopic silver substrates, using ω-substituted alkanethiols with very short alkane chains (such as cysteamine or mercaptopropionic acid) to backfill the empty spaces on the metal surface unoccupied by DNA. When 6-mercapto-1-hexanol is used to fill the unoccupied places on a silver surface (as in experiments on standard gold substrates), a quick detachment of chemisorbed DNA from the silver surface is observed. Whereas, using ω-substituted alkanethiols with a shorter alkane chain makes it possible to easily form mixed DNA/backfilling thiol monolayers. Probably, the significantly lower desorption rate of the thiolated DNA induced by alkanethiols with shorter chains is due to the lower stabilization energy in monolayers formed from such compounds.     

TiO2–carbon nanotube composites for visible photocatalysts – Influence of TiO2 crystal structure

We investigated the influence of the crystal structure of TiO₂ and the use of different TiO₂ precursors on the properties and photocatalytic activity of carbon nanotube (CNTs)–titania composites. We found that the crystal structure and properties of starting TiO₂ nanomaterial significantly affected the effect of CNTs incorporation on the photocatalytic activity under simulated solar and visible light illumination (simulated solar illumination with UV-blocking filter). In case of significant photocatalytic activity under visible light illumination (anatase TiO₂), likely due to the presence of native defects, composites exhibited lower activity under visible illumination only, but higher activity under simulated solar illumination. The opposite trends were observed for P25 (anatase + rutile) and rutile TiO₂, where incorporation of CNTs resulted in a significant increase of photocatalytic activity under visible illumination. Thus, control over crystal structure and native defects is essential for the development of efficient visible light activated photocatalysts.     

About Some Boundary Value Problems for Fractional PDE and their Numerical Solution

A transmission initial-boundary-value problem in disjoint intervals for fractional in time diffusion equation is studied. Its well posedness in the corresponding Sobolev-like spaces is proved. (© 2013 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim)     

Dual field nonlinear dielectric spectroscopy in a glass forming EPON 828 epoxy resin

Results of the dual field nonlinear dielectric spectroscopy (NDS) studies in supercooled glass forming epoxy resin EPON 828 are presented. For the NDS, changes of dielectric permittivity induced by DC (rectangular) or AC (sine-wave) pulses of a strong electric field were probed by a weak radio frequency electric field. A clear stretched exponential (x < 1) decay after switching off the DC pulse and a single exponential decay (x = 1) after switching off the AC pulse were found. The same results are presented for preliminary studies in superpressed low molecular glass former di-isobutyl phthalate. This observation may be considered as an argument for the heterogeneous picture of supercooled glass forming materials. The temperature dependences of the stationary responses related to DC and AC strong electric field excitations are also shown. The sensitivity of the applied set up made it possible to detect NDS outputs even for electric fields E(strong) < 10 kV cm(-1), qualitatively weaker than in similar 'nonlinear, dielectric' experimental studies on glass forming materials carried out so far.     

Raman light scattering,infrared absorption and DSC studies of the phase transition and vibrational and reorientational dynamics of H2O ligands and ClO4– anions in [Ba(H2O)3](ClO4)2

[Ba(H₂O)₃](ClO₄)₂ between 90 and 300 K possesses two solid phases. One phase transition of the first‐order type at: = 211.3 K (on heating) and = 204.6 K (on cooling) was determined by differential scanning calorimetry. The entropy change value (ΔS ≈ 15 Jmol^–1 K^–1), associated with the observed phase transition, indicates a moderate degree of molecular dynamical disorder. Both, vibrational and reorientational motions of H₂O ligands and ClO₄^– anions, in the high‐temperature and low‐temperature phases, were investigated by Fourier transform far‐infrared and middle‐infrared and Raman light scattering spectroscopies. The temperature dependences of the full‐width at half‐maximum values of the bands associated with ρ_w(H₂O) mode, in both infrared (~570 cm^–1) and Raman light scattering (~535 cm^–1) spectra, suggest that the observed phase transition is not associated with a sudden change of a speed of the H₂O reorientational motions. Ligands reorient fast, with correlation time of the order of several picoseconds, with a mean activation energy value E_a = 5.1 kJ mol^–1 in both high and low temperature phases. On the other hand, measurements of temperature dependences of full‐width at half‐maximum values of the infrared band at ~460 cm^–1, associated with δ_d(OClO)E mode, and Raman band at ~1105 cm^–1, associated with ν_as(ClO)F₂ mode, revealed the existence of a fast ClO₄^– reorientation in phase I and in phase II, with the E_a(I) and E_a(II) values equal to 8.0 and 6.5 kJ mol^–1, respectively. These reorientational motions of ClO₄^– are slightly distorted at the T_C. Fourier transform far‐infrared and middle‐infrared spectra with decreasing of temperature indicated characteristic changes at the vicinity of PT at T_C, which suggested lowering of the crystal structure symmetry. All these experimental facts suggest that the discovered phase transition is associated with small change of H₂O ligands and somewhat major change of ClO₄^– anions reorientational dynamics, and with insignificant change of the crystal structure, too. Copyright © 2012 John Wiley & Sons, Ltd.     

Determination of gallium in bayer process sodium aluminate solution by inductively coupled plasma atomic emission spectrometry

The determination of gallium in sodium aluminium solutions by inductively coupled plasma atomic emission spectrometry is reported. The spectral line profiles of three Ga lines are recorded over a short wavelength region in the presence of interfering ions, by varying the observation height from 8 to 20 mm and the RF power from 1.0 to 1.75 kW. Under fixed ICP conditions, matrix interferences are observed. The results indicate a complex matrix effect on gallium in the presence of different concentrations of sodium. The proposed method is applied successfully to the determination of gallium (110–120 μg ml^?) in Bayer process aluminate solution.     

Medium Effect on the Rotational Isomerism in 1,3,5-Triacetylbenzene

Summary. The optimal geometries, energies, polarities, infrared frequencies, and intensities of the non-polar and polar conformers of 1,3,5-triacetylbenzene were calculated using DFT/B3LYP/6-311G** and semi-empirical (AM1 and PM3) methods. All the methods revealed that the non-polar conformer prevails in vacuum. The infrared spectra in the solid state, in Ar matrix, and in liquid solutions as well as the dipole moments of 1,3,5-triacetylbenzene in many solvents show the distinct influence of the environment on the non-polar conformer ⇌ polar conformer equilibrium. The effect of solvent polarity on the standard Gibbs energy of this conformational equilibrium is quantitatively discussed in terms of the continuum-homogenous dielectric model.