Nanosized aptameric cavities imprinted on the surface of magnetic nanoparticles for high-throughput protein recognition

The authors introduce a new kind of surface artificial biomimetic receptor, referred to as aptameric imprinted polymer (AIP), for separation of biological macromolecules. Highly dispersed magnetic nanoparticles (MNPs) were coated with silica and then functionalized with methacrylate groups via silane chemistry. The aptamer was covalently immobilized on the surface of nanoparticles via a “thiol-ene” click reaction. Once the target analyte (bovine serum albumin; BSA) has bound to the aptamer, a polymer is created by 2-dimensional copolymerization of short-length poly(ethylene glycol) and (3-aminopropyl)triethoxysilane. Following removal of BSA from the polymer, the AIP-MNPs presented here can selectively capture BSA with a specific absorbance (κ) as high as 65. When using this AIP, the recovery of BSA from spiked real biological samples is >97%, and the adsorption capacity is as high as 146 mg g^?1. In our perception, this method has a wide scope in that it may be applied to the specific extraction of numerous other biomolecules.

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Graphical abstract Schematic presentation of the AIP (aptamer-imprinted polymer) introduced here. The surface of silica coated magnetic nanoparticles is modified with a polymer that is covalently modified with an aptamer against bovine serum albumin (BSA).

     

The substitution effect on heavy versions of cyclobutadiene

The structural and electronic characteristics of the M₄R₄ with M = C, Si, Ge and R = H, F, Cl, OH, MgH, BH₂, NH₂ Li are studied by ab initio calculations based on density functional theory using the hybrid B3LYP functional and 6‐311++G* basis set. The results of natural bond orbital analysis (NBO), the analysis of structural parameters (bond lengths and bond angle, dihedral angle), atoms in molecules based theory (AIM) topological parameters such as the characteristics of bond critical points (electron densities and their Laplacians) leads to the conclusion that interamolecular interaction due with OH, MgH₂, and NH₂ substitutions are different from other derivatives. The cyclobutadiene ring and its heavy versions display very different geometrical structures. The cations and anions of C₄R₄, Si₄R₄, and Ge₄R₄ were studied to determine the effect of substitution on structure and stability. It has been shown that substitutions with ability of forming hydrogen bonds, bound to the silicon and germanium atoms are able to change the properties of the four‐member rings more than the other substitutions. Comprehensive analyses of calculated NICS (nucleus‐independent chemical shifts), polarizability, electrophilicity, and electron density are done. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2010     

Spectroscopic, Thermal and Structural Studies of Cocrystals of 2,2′-Diamino-4,4′-bis(1,3-thiazole) with 2,5-Bis(4-pyridyl)-3,4-Diaza-2,4-Hexadiene and 1,2-Bis(4-pyridyl)Ethylenediamine

Abstract  

Two cocrystals of 2,2′-diamino-4,4′-bis(1,3-thiazole) (DABTZ) with 2,5-bis(4-pyridyl)-3,4-diaza-2,4-hexadiene (bpdh) and 1,2-bis(4-pyridyl)ethylenediamine (bpen) {[(DABTZ)(bpdh)] and [(DABTZ)(bpen)], respectively} have been synthesized and characterized by elemental analysis, IR-, ¹H NMR-, ¹³C NMR spectroscopy and were studied by thermal analysis and X-ray crystallography. Self-assembly of these compounds in the solid state is likely caused by hydrogen bonding with minor contributions from π–π stacking, C–H···π and possibly charge transfer interactions.     

Anion‐binding properties of two calix[4]arene derivatives containing two ferrocene imine or ferrocene amine units at the upper rim

Calix[4]arene derivatives containing ferrocene units at the upper rim have been synthesized and their anion‐binding and sensing investigated towards anions such as chloride, bromide and hydrogen sulfate by cyclic voltammetry. Electrochemical studies show that these redox‐active ligands electrochemically recognize chloride and bromide anions. These compounds have excellent selectivity for chloride and bromide ions, in the comparison with hydrogen sulfate anion. With ferrocenyl Schiff base calix[4]arene 1 an anodic shift as large as 302 mV is observed on addition of four equivalents of Cl⁻ anion. Also electrochemical and UV–vis spectroscopic titrations ferrocenyl calix[4]arene derivatives 1 with chloride and bromide ions and 2 (only with Cl⁻) indicate a 1:1 binding‐stiochiometry. Copyright © 2011 John Wiley & Sons, Ltd.     

Solvent-Free Synthesis of 2-Amino-3-aryl-5-substituted Thiophenes as Anti-inflammatory Agents using KF-Al2O3 under Microwave Irradiation

The synthesis of 2-amino-3-aryl-5-substituted thiophenes as anti-inflammatory agents catalyzed by KF-Al₂O₃ under microwave irradiation is reported.     

Solvent-free synthesis of penta-substituted pyrroles: one-pot reaction of amine, alkyl acetoacetate, and fumaryl chloride

A novel, convenient, and efficient approach to the synthesis of penta-substituted pyrroles has been reported based on the multicomponent reaction. Solvent-free condition for the formation of enaminones from primary amines and alkyl acetoacetates and it's reaction with fumaryl chloride lead to the formation of pyrroles that have halide, CH₂CO₂H, ester functional groups, and two alkyl substitutions.