Development of a linear type of low molecular weight CXCR4 antagonists based on T140 analogs

A linear type of several low molecular weight CXCR4 antagonists were developed based on T140 analogs, which were previously found to be strong CXCR4 antagonists that block X4-HIV-1 entry and have inhibitory activities against cancer metastasis/progression and rheumatoid arthritis.     

Variations in steady-state and time-resolved background luminescence from surface-enhanced resonance Raman scattering-active single Ag nanoaggregates

We observed a background luminescence emission that was associated with surface-enhanced resonance Raman scattering (SERRS) of rhodamine 6G (R6G) molecules adsorbed on single Ag nanoaggregates and investigated the origin of the background luminescence. Thanks to the observation of single nanoaggregates, we clearly identified nanoaggregate-by-nanoaggregate variations in the steady-state and time-resolved background luminescence spectra of each nanoaggregate. From the variations in the steady-state spectra, two kinds of key properties were revealed. First, the background luminescence spectra were divided into four components: one fluorescence band corresponding to the monomers of R6G and three Lorentzian bands whose maxima were red-shifted from the fluorescence maximum of the monomer by several tens of nanometers. On the basis of the red-shifted luminescence maxima, and experimental and theoretical studies of background luminescence, we attributed the three background luminescences to fluorescence from aggregates (dimer and two kinds of higher-order aggregates) of R6G molecules on an Ag surface. Second, a positive correlation was observed between wavelengths of background luminescence maxima and wavelengths of plasmon resonance maxima. This positive correlation invoked the idea that the dipoles of both the background luminescence and the plasmon radiation are coupled with each other. From the key observations in the steady-state background luminescence spectra, we propose that two factors contribute to the variations in the steady-state background luminescence spectra; one is the aggregation (monomer, dimer, and two kinds of higher-order aggregates) of R6G molecules on an Ag surface, and the other is plasmon resonance maxima of single Ag nanoaggregates. Considering these two factors, we propose that the variations in the time-resolved background luminescence spectra are associated with deaggregation of R6G molecules (higher- to lower-order aggregates) and temporal shifts in the plasmon resonance maxima of single Ag nanoaggregates.     

2-烷基TCNQ的红外光谱和结构研究——CH_2剪式振动的双峰与晶体场分裂的关系(英文)

测量了2-烷基TCNQ(C8TCNQ,C12TCNQ,C18TCNQ)浇铸膜的红外光谱,发现这类化合物的红外CH2剪式振动在1 471和1 462 cm-1处显示2个峰。这2个峰的强度比(I1 471/I1 462)随着烷基链的长度增加而明显减少。另外,来自CH2的1 471 cm-1吸收峰与来自TCNQ环的1 529 cm-1吸收峰的相对强度随着碳链的长度增加而不发生变化。CnTCNQ系列化合物的红外光谱CH2的剪式振动行为与长链脂肪酸中CH2行为很不相同。在长链脂肪酸中,晶体场效应导致了剪式振动分裂。考虑C12TCNQ的晶体结构,而将1 471cm-1峰归属为非叉指对接的碳链,将1 462 cm-1峰归于叉指对接的碳链,双峰的出现与晶体场分裂无关。并且得到烷基TCNQ中,非叉指对接的碳链的长度与碳链总长度无关的结论。     

Modeling the drainage and groundwater table above the collecting pipe through 2D groundwater models

In order to understand the effects of the landfill operation on groundwater flow behavior, 2D horizontal groundwater simulation model was carried out. The model saved the memory of computer and time consumption comparing with 3D groundwater flow model. However, the most difficulty is the assignment of collecting pipe boundary in the study site. Therefore, 2D vertical model was applied to calculate the change of groundwater table above the collecting pipe. This paper paid attention to examine the validation of the assignment of the collecting pipe boundary by applying the results of 2D vertical model. 2D horizontal model was coupled with the recharge model to solve the partial differential equation of groundwater flow. Finite difference method and iterative successive over relaxation were applied. The drainage volume of leachate collection was summed up in the whole landfill site and compared with the average volume of treated waste water. The study demonstrated that the results of 2D vertical model validated and can be applied to 2D horizontal groundwater flow simulation.     

Analysis of DNA adducts of acetaldehyde by liquid chromatography-mass spectrometry

A highly sensitive method using liquid chromatography-electrospray ionization mass spectrometry (LC-ESI-MS) was developed for the analysis of DNA adducts of acetaldehyde (AA). AA, which is the primary oxidative metabolite of ethanol, is considered to possess carcinogenic activity. AA reacts with the exocyclic amino group of guanine in DNA to form N2-ethylguanine (Et-Gua) and 1,N2-propanoguanine (Pr-Gua) adducts. With the present method, such adducts were detected as the base forms from DNA chains using depurination in the pretreatment process. In our measurement with LC-ESI-MS, the limits of detection (LODs) of the Et-Gua and Pr-Gua adducts of the base forms were 3.0 x 10(-10) and 1.0 x 10(-9) M, respectively, and the LODs are about two orders of magnitude lower than those of the nucleoside forms. Calf thymus DNA samples treated with AA and NaBH3CN were analyzed by this method. Et-Gua was clearly detected and, in the absence of NaBH3CN, Pr-Gua was detected predominantly. Furthermore, the method was also applied to study whether or not these two adducts are formed in DNA of cultured HL-60 cells during exposure to AA for 24 h. Pr-Gua was clearly detected and traces of Et-Gua were also detected in the DNA of the cells. Although the sensitivity of this method is lower by at least oneorder of magnitude than the 32P-postlabeling assay, currently the most sensitive method, our method does not involve complex enzymatic reactions for the postlabeling and the use of troublesome radioactive materials. Furthermore, it enables structural identification of guanine adducts. The present method would be a useful tool for studies of Et-Gua and Pr-Gua adducts in connection with carcinogenesis.     

Synthesis of poly(amino acid)s on molecular assemblies formed by functional active esters of amino acids

The new active β-alanine and glycine esters ( 6 and 7 ) of N-hydroxy-2,3-dihexadecylsuccinimide were prepared and their polycondensation was studied. The aggregation behavior of these esters was examined by an electron microscopy and an osmotic method. They formed multilamella in water and reversed micelle in nonpolar solvents. These solvents were found to be suitable for the polycondensation, which gave the corresponding poly(amino acid)s. The results of polycondensation can be explained by assuming that the aggregations, that is, multilamella in water and reversed micelle in nonpolar solvents, are playing an important role in the polycondensation.     

Asymmetric anionic polymerization of N‐1‐naphthylmaleimide with chiral ligand‐organometal complexes in toluene

Asymmetric anionic homopolymerizations of N‐1‐naphthylmaleimide (1‐NMI) were performed with chiral ligand/organometal complexes to form optically active polymers. Poly(1‐NMI)s obtained with methylene‐bridged bisoxazoline derivatives (Rbox)‐diethylzinc (Et₂Zn) complexes showed high specific optical rotations ([α]) from +152.3 to +191.4°. Circular dichroism spectra of the polymers exhibited a split Cotton effect in the UV absorption‐band region. According to the exciton chirality method, the absolute configuration of the polymer main chain was determined according to the following method: (+)‐poly[N‐substituted maleimides (RMI)] main chains can contain more (S,S)‐ than (R,R)‐configurations. (?)‐Poly(RMI) main chains can contain more (R,R)‐ than (S,S)‐configurations. © 2001 John Wiley & Sons, Inc. J Polym Sci Part A: Polym Chem 39: 3556–3565, 2001     

Two-dimensional fluorescence correlation spectroscopy II: spectral analysis of derivatives of anthracene and pyrene in micellar solutions

Generalized two-dimensional (2D) correlation spectroscopy has been applied to the analysis of fluorescence spectra in two micellar systems: (1) a mixture of pyrene and 1,3,6,8-pyrenetetrasulfonic acid in the cationic micellar solutions of cetyltrimethylammonium chloride (CTAC) and (2) a mixture of pyrene and 9-anthracencepropionic acid in anionic micellar solutions of sodium dodecyl sulfate (SDS). Fluorescence quenching is employed as a perturbation mode for causing intensity changes in fluorescence bands (quenching perturbation). Iodide ion (I-) is used as a quencher in the former system, and cetyl pridinium chloride (CPC) is used in the latter. Vibronic bands in the complicated fluorescence spectra of the mixture of the analytes were successfully resolved. It is shown that asynchronous maps are especially useful for spectral resolution enhancement when the quenching perturbation is employed in 2D fluorescence correlation spectroscopy. Furthermore, the information about the order of response of the bands to quenching is obtained by comparing the signs of synchronous and asynchronous cross-peaks.     

Generalized two-dimensional correlation spectroscopy

Since the theory of generalized two-dimensional (2-D) correlation spectroscopy was proposed, it has been keenly concerned in scientific research and its analytical method has been widely applied in various analytical fields. The mathematical process to construct generalized 2-D correlation spectroscopy and the physical meaning of 2-D correlation spectral map are described, and three examples in the fields of chemical analysis and molecular biology are provided, such as the component analysis of organic solvent, the analysis of biological molecules in the solvent with different pH values and structural analysis of protein. The theory and analytical method of generalized 2-D correlation spectroscopy are also detailedly commented.     

Di-isopropyl fluorophosphate electrode based on squid nerve tissue

Di-isopropyl fluorophosphatase is contained in the giant axon of squid nerve tissue. This tissue can be coupled with a fluoride ion-selective electrode to produce an electrode selective to di-isopropyl fluorophosphate. The semilogarithmic calibration curve at pH 7.1 is linear over the range 2 × 10^?6?7 × 10^?3 M (RSD < 3% ) with a slope of about 44 mV/decade. The detection limit is 8 × 10^?6 M. The electrode lifetime (with constant response characteristics) is about 16 days.