Photoreaction Cycle of Phoborhodopsin (Sensory Rhodopsin II) from Halobacterium salinarum Expressed in Escherichia coli

Phoborhodopsin (pR; also called sensory rhodopsin II, SRII) is a photoreceptor of negative phototaxis of halobacteria. The studies of photochemical properties of this pigment are not many because the amount of the pigment is small and the stability is low. Recently an expression system of phoborhodopsin from Halobacterium salinarum (called salinarum phoborhodopsin, spR; also HsSRII) in Escherichia coli and purification method has been developed (Mironova et al. [2005] FEBS Lett., 579, 3147–3151), which enables detailed studies on the photochemical properties of spR. In the present work, the photoreaction cycle of E. coli-expressed spR was studied by low-temperature spectroscopy and flash photolysis. Formations of K-, M-, O-like intermediates and P480 were reconfirmed as reported previously. New findings are as follows. (1) The K-like intermediate (P500) was a mixture of two photoproducts. (2) Formation of L-like intermediate (P482) was observed by low-temperature spectroscopy and flash photolysis at room temperature. (3) On long irradiation of spR at 20°C, formation of a new photoproduct P370 was observed and it decayed to the original spR in the dark with a decay half time of 190 min. Based on these results the similarities and dissimilarities between spR and ppR are discussed.     

Packing manner of graft copolymers with rigid‐rod main chains and amorphous‐crystalline diblock copolymers as side chains

We have investigated the morphology and packing manner of graft copolymers consisting of rigid‐rod‐like poly(γ‐benzyl L ‐glutamate) (PBLG) main chains and grafted diblock copolymers of amorphous poly(propylene glycol) (PPG) and crystalline poly(ethylene glycol) (PEG). The results of differential scanning calorimetry and wide‐angle X‐ray scattering measurements for graft copolymers with higher side‐chain volume fractions suggest that the rodlike main chains and crystallized PEG chains exist in segregated domains. Small‐angle X‐ray scattering profiles for these samples show diffraction intensity maxima accompanied by higher order peaks, the positions of which suggest the formation of an ordered layered structure. From these observations, the graft copolymers are estimated to form repeated layered structure consisting of segregated PBLG, PPG, and PEG layers. A proposed model for molecular packing of the graft copolymers is consistent with the experimental observation that the repeating distance for the layered structure decreases with an increase in the volume fraction of side chains. © 2002 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 40: 1904–1912, 2002     

Comparative analysis of the effects of internal lasing oscillation and external light injection on semiconductor optical amplifier performance

One of the key differences of a semiconductor optical amplifier (SOA) with internal lasing oscillation (ILO) from a SOA with external light injection (ELI) lies in a carrier-sharing mechanism. Since the internal lasing mode shares the same pool of carriers with the signals, the carriers (or photons) withdrawn from the circulating laser mode speed up the gain recovery. On the other hand, the external light injected into the SOA shortens the carrier recovery time through optical pumping without any carrier sharing involved. To find out a better scheme, we have made a comparative investigation on the effects of the ILO and ELI on the SOA performance. It turns out by way of simulation that the ELI scheme provides faster gain recovery, shorter carrier lifetime, and higher saturation power when the external injection power is higher than the internal lasing power. The performance enhancement is not so pronounced with the carrier-sharing mechanism, as the internal lasing mode itself gives rise to severe longitudinal spatial hole burning (LSHB). Nevertheless, the ILO scheme is preferable for linear-amplification applications. We also examine the use of the ELI for low-crosstalk optical amplifiers. It is found that the ELI scheme does not bring in a very strong resonance peak in the crosstalk, which appears in a SOA with ILO due to relaxation oscillations of the lasing mode. In comparison to the ILO in SOAs, the ELI into SOAs is likely to leave more optical gain for multi-channel amplification without any sacrifice on the crosstalk.     

The L resolvents of elliptic operators with uniformly continuous coefficients

We consider the strongly elliptic operator A of order 2m in the divergence form with bounded measurable coefficients and assume that the coefficients of top order are uniformly continuous. For 1<p<∞, A is a bounded linear operator from the L^p Sobolev space H^m,p into H^−m,p. We will prove that (A−λ)⁻¹ exists in H^−m,p for some λ and estimate its operator norm.     

The Markov Model Based Algorithm to Predict Networking Load on the Computational Grid

The computational Grid is currently gaining in popularity, and it enables computers scattered all over the world to be connected by the Internet as if they are part of a large computational infrastructure. While the computational Grid gathers more and more computational resources and the number of the applications for the computational Grid is increasing, load balancing for the computational Grid is still not effective enough. Because the computers are connected by a wide area network on the computational Grid, the significant communication latency and the frequency of large wave throughputs make it difficult to achieve effective load balancing. Thus, in this paper, we propose an algorithm to predict networking loads on the computational Grid to make the use of computational resources more efficient. The proposed algorithm based on the Markov model is evaluated using an actual networking load. As a result, the Markov model based algorithm offers the most accurate predictions compared with the related work. This revised version was published online in July 2006 with corrections to the Cover Date.     

Photochemical intramolecular nitrene insertion of 6-azidouridine derivatives

A highly efficient intramolecular nitrene insertion was observed upon irradiation of 6-azidouridine derivatives. The N⁶,2′-cyclo structure of the product was determined unequivocally by X-ray crystallography.     

A Strategy to Control the Reactivation of Frustrated Lewis Pairs from Shelf‐Stable Carbene Borane Complexes

N‐Phosphine oxide substituted imidazolylidenes (PoxIms) have been synthesized and fully characterized. These species can undergo significant changes to the spatial environment surrounding their carbene center through rotation of the phosphine oxide moiety. Either classical Lewis adducts (CLAs) or frustrated Lewis pairs (FLPs) are thus formed with B(C₆F₅)₃ depending on the orientation of the phosphine oxide group. A strategy to reactivate FLPs from CLAs by exploiting molecular motions that are responsive to external stimuli has therefore been developed. The reactivation conditions were successfully controlled by tuning the strain in the PoxIm–B(C₆F₅)₃ complexes so that reactivation only occurred above ambient temperature.     

Moment convergence of <Emphasis Type="Italic">Z</Emphasis>-estimators

The problem to establish the asymptotic distribution of statistical estimators as well as the moment convergence of such estimators has been recognized as an important issue in advanced theories of statistics. This problem has been deeply studied for M-estimators for a wide range of models by many authors. The purpose of this paper is to present an alternative and apparently simple theory to derive the moment convergence of Z-estimators. In the proposed approach the cases of parameters with different rate of convergence can be treated easily and smoothly and any large deviation type inequalities necessary for the same result for M-estimators do not appear in this approach. Applications to the model of i.i.d. observation, Cox’s regression model as well as some diffusion process are discussed.     

On the Conservativeness of Some Markov Processes

We give a unified method to obtain the conservativeness of a class of Markov processes associated with lower bounded semi-Dirichlet forms on L ²(X;m), including symmetric diffusion processes, some non-symmetric diffusion processes and jump type Markov processes on X, where X is a locally compact separable metric space and m is a positive Radon measure on X with full topological support. Using the method, we give an example in each section, providing the conservativeness of the processes, that are given by the “increasingness of the volume of some sets(balls)” and “that of the coefficients on the sets” of the Markov processes.