CompassR Yields Highly Organic-Solvent-Tolerant Enzymes through Recombination of Compatible Substitutions

The CompassR (computer-assisted recombination) rule enables, among beneficial substitutions, the identification of those that can be recombined in directed evolution. Herein, a recombination strategy is systematically investigated to minimize experimental efforts and maximize possible improvements. In total, 15 beneficial substitutions from Bacillus subtilis lipase A (BSLA), which improves resistance to the organic cosolvent 1,4-dioxane (DOX), were studied to compare two recombination strategies, the two-gene recombination process (2GenReP) and the in silico guided recombination process (InSiReP), employing CompassR. Remarkably, both strategies yielded a highly DOX-resistant variant, M4 (I12R/Y49R/E65H/N98R/K122E/L124K), with up to 14.6-fold improvement after screening of about 270 clones. M4 has a remarkably enhanced resistance in 60 % (v/v) acetone (6.0-fold), 30 % (v/v) ethanol (2.1-fold), and 60 % (v/v) methanol (2.4-fold) compared with wild-type BSLA. Molecular dynamics simulations revealed that attracting water molecules by charged surface substitutions is the main driver for increasing the DOX resistance of BSLA M4. Both strategies and obtained molecular knowledge can likely be used to improve the properties of other enzymes with a similar α/β-hydrolase fold.     

Double-Network Heparin Dynamic Hydrogels: Dynagels as Anti-bacterial 3D Cell Culture Scaffolds

Double cross-linked dynamic hydrogels, dynagels, have been prepared through reversible imine bonds and supramolecular interactions, which showed good pH responsiveness, injectability, self-healing property and biocompatibility. With the further encapsulation of heparin, the obtained hydrogels exhibited good anti-bacterial activity and promotion effects for 3D cell culture.     

Research Progress on Synthesis and Application of Cyclodextrin Polymers

Cyclodextrins (CDs) are a series of cyclic oligosaccharides formed by amylose under the action of CD glucosyltransferase that is produced by Bacillus. After being modified by polymerization, substitution and grafting, high molecular weight cyclodextrin polymers (pCDs) containing multiple CD units can be obtained. pCDs retain the internal hydrophobic-external hydrophilic cavity structure characteristic of CDs, while also possessing the stability of polymer. They are a class of functional polymer materials with strong development potential and have been applied in many fields. This review introduces the research progress of pCDs, including the synthesis of pCDs and their applications in analytical separation science, materials science, and biomedicine.     

极性和非极性溶剂在聚乙烯中的无限稀释扩散系数的测定

 气相法研究小分子溶剂与高分子聚合物材料之间的相互作用是一个快速、准确、方便的方法 ,可以测量多种小分子溶剂在聚合物中的溶解、扩散参数。通过气相法测定了 5种小分子溶剂 (正己烷、正庚烷、正癸烷、乙醇和水 )在固定液聚乙烯中的保留时间和半峰宽 ,运用vanDeemter模型进行数据处理 ,得到上述 5种小分子在聚乙烯中的无限稀释扩散系数 ,获得了十分有意义的结果。     

Influence of drying procedure on the mesoporosity and surface fractal dimensions of silica xerogels prepared with different agitation methods

Silica xerogels were prepared by thermal drying wet gels in an electric oven (70 degrees C) after certain duration of ambient drying, and the relevant effect is investigated on the mesopore structures and surface fractal dimensions of the resultant xerogels. The silica gels were derived from a hydrochloric acid-catalyzed TEOS (tetraethylorthaosilicate) system, and both magnetic stirring and ultrasonic vibration were adopted during sol preparation. The percentage mesoporosity and surface fractal dimensions are evaluated using image analysis methods, based on FE-SEM (field emission gun-scanning electron microscopy) images. The results show that the mesoporosity of the resultant xerogels decreases with the duration of ambient drying for samples prepared using magnetic stirring and low-intensity ultrasonic vibration, while samples subjected to high-intensity ultrasound show a somewhat reverse trend. Samples prepared with magnetic stirring have almost constant surface fractal dimensions (nearly 3), irrespective of the ambient drying before thermal drying. The surface fractal dimensions of samples prepared using ultrasound increase with the duration of ambient drying.     

Ring-opening Polymerization of e-Caprolactone Using Lanthanide Tris(4-tert-butylphenolate)s as a Single-component Initiator

The ring-opening polymerization of e-caprolactone (CL) initiated by novel single lanthanide tris(4-tert-butylphenolate)s [Ln(OTBP)3] is reported. Single-component La(OTBP)3 can effectively prepare polycaprolactone (PCL) with over 90% yield and viscosity average molecular weight about 60 x 10 under quite mild conditions: molar ratio of CL to initiator is 1000, 60 C, 2 h in toluene. Mechanism study indicates that the monomer inserts into the growing chain via the break of acyl-oxygen bond of CL.     

Evaluation of gas chromatography-mass spectrometry in conjunction with chemometric resolution for identification of nitrogen compounds in crude oil

A chemometric resolution method is described for the identification of nitrogen compounds in crude oil. Prefractionation of crude oil into discrete chemical classes was performed by adsorption column chromatography using small quantities of neutral aluminum oxide and silicic acid. Subsequent high-resolution separation of individual components was achieved by using capillary column gas chromatography, and compound types were detected by mass spectrometer. In conjunction with a combined chemometric method, each principal chemical class was further resolved and separated, which made it possible to identify some nitrogen compounds in the investigated oils. To a certain extent, this method could relieve classical analysis of difficulty in identifying those species with poorly low contents or partially chromatographic overlaps, particularly in the cases where authentic standards were not available for addition into the unknown analytical systems to reveal what indeed existed in them.     

A pre-enrichment procedure using diethyldithiocarbamate-modified TiO2 nanoparticles for the analysis of biological and natural water samples by ICP-AES

In this article, a new method that utilizes a diethyldithiocarbamate-modified nanometre TiO₂ (TiO₂–DDTC) as solid-phase extractant has been developed for simultaneous preconcentration of trace Cu(II), Pb(II), Zn(II), and Cd(II) prior to measurement by inductively coupled plasma atomic emission spectrometry (ICP-AES). The separation/preconcentration conditions of analytes, which include the effects of pH, sample flow rate and volume, elution conditions, and interfering ions on the recovery of the analytes, were investigated. At pH 5, the adsorption capacity of modified nanometre TiO₂–DDTC was found to be 6.2, 19, 4.7, and 6.0?mg/g for Cu(II), Pb(II), Zn(II), and Cd(II), respectively. According to the definition of IUPAC, the detection limits (3σ) of this method for Cu(II), Pb(II), Zn(II), and Cd(II) were 0.41, 1.7, 0.39, and 0.52?ng/mL, respectively. The proposed method achieved satisfied results when applied to the determinations of trace Cu(II), Pb(II), Zn(II), and Cd(II) in biological and natural water samples.     

Regioselective Nitration of Phenols by NaNO3 in Microemulsion

Highly regiospecific mononitration of phenols and substituted phenols was carried out in TX100-based microemulsion. The use of inexpensive and relatively nontoxic acidic reagent is an advantage of this method. The effect of various parameters such as concentration of NaNO₃, temperature, and agitation speed on reaction system have been investigated. Exclusive ortho-selectivity was observed for all the phenols subjected to this protocol.     

Decorating Mn3O4 nanoparticle on NiO nanoflake arrays for high-performance electrochemical biosensors

Journal of Solid State Electrochemistry - Substrate materials play a significant role in the improvement of electrochemical biosensors. In the present work, NiO nanoflake arrays were fully and...