Examination of the role of intestinal fatty acid-binding protein in drug absorption using a parallel artificial membrane permeability assay

Transcellular diffusion across the absorptive epithelial cells (enterocytes) of the small intestine is the main route of absorption for most orally administered drugs. The process by which lipophilic compounds transverse the aqueous environment of the cytoplasm, however, remains poorly defined. In the present study, we have identified a structurally diverse group of lipophilic drugs that display low micromolar binding affinities for a cytosolic lipid-binding protein - intestinal fatty acid-binding protein (I-FABP). Binding to I-FABP significantly enhanced the transport of lipophilic drug molecules across a model membrane, and the degree of transport enhancement was related to both drug lipophilicity and I-FABP binding affinity. These data suggest that intracellular lipid-binding proteins such as I-FABP may enhance the membrane transport of lipophilic xenobiotics and facilitate drug access to the enterocyte cytoplasm and cytoplasmic organelles.     

A reductionist biomimetic model system that demonstrates highly effective Zn(II)-catalyzed cleavage of an RNA model

The cyclization of the RNA model 2-hydroxypropyl p-nitrophenyl phosphate (HPNPP, 1) promoted by Zn2+ alone and the 1,5,9-triazacyclododecane complex of Zn2+ (Zn2+:[12]aneN3) is studied in ethanol in the presence of 0.5 equiv of -OEt/Zn2+ to investigate the effect of a low polarity/dielectric medium on a metal-catalyzed reaction of biological relevance. Ethanol exerts a medium effect that promotes strong binding of HPNPP to Zn2+, followed by a dimerization to form a catalytically active complex (HPNPP:Zn2+)2 in which the phosphate undergoes cyclization with a rate constant of kcat = 2.9 s(-1) at s(s)pH 7.1. In the presence of the triaza ligand:Zn2+ complex, the change from water to methanol and then to ethanol brings about a mechanism where two molecules of the complex, suggested as EtOH:Zn2+:[12]aneN3 and its basic form, EtO-:Zn2+:[12]aneN3, bind to HPNPP and catalyze its decomposition with a rate constant of kcat of 0.13 s(-1) at s(s)pH 7.1. Overall, the acceleration exhibited in these two situations is 4 x 10(14)-fold and 1.7 x 10(12)-fold relative to the background ethoxide-promoted reactions at the respective s(s)pH values. The implications of these findings are discussed within the context of the idea that enzymatic catalysis is enhanced by a reduced effective dielectric constant within the active site.     

Computation of free energy profiles with parallel adaptive dynamics

We propose a formulation of an adaptive computation of free energy differences, in the adaptive biasing force or nonequilibrium metadynamics spirit, using conditional distributions of samples of configurations which evolve in time. This allows us to present a truly unifying framework for these methods, and to prove convergence results for certain classes of algorithms. From a numerical viewpoint, a parallel implementation of these methods is very natural, the replicas interacting through the reconstructed free energy. We demonstrate how to improve this parallel implementation by resorting to some selection mechanism on the replicas. This is illustrated by computations on a model system of conformational changes.     

The effectiveness of three multi-component binding models in describing the binary competitive equilibrium adsorption of two cytochrome b(5) mutants

Competitive adsorption isotherms for two conservative surface charge-neutralizing mutants of cytochrome b(5), E11Q and E44Q, previously measured with competitor concentration held constant over the range of the isotherm, were used to test three widely-used multi-component isotherm models. The extended Langmuir-Freundlich, Langmuir and Jovanovic-Freundlich models each adequately described the weaker infinite dilution adsorption of the E44Q protein in the presence of the strong binding E11Q. The extended Langmuir-Freundlich model generally gave the lowest errors at higher concentrations, and the Jovanovic-Freundlich model gave the best fits when using empirically optimized maximal loading values based on multi-component as well as pure-component isotherm data.     

Monolayer-protected gold nanoparticles by the self-assembly of micellar poly(ethylene oxide)-b-poly(epsilon-caprolactone) block copolymer

A study is presented of the preparation of gold nanoparticles incorporated into biodegradable micelles. Poly(ethylene oxide)-b-poly(epsilon-caprolactone) (PEO-b-PCL) copolymer was synthesized by ring-opening polymerization, and the hydroxyl end group of the PCL block was modified with thioctic acid using dicyclohexyl carbodiimide as the coupling reagent. The PEO-b-PCL-thioctate ester (TE) thus obtained was used in a later step to form monolayer protected gold nanoparticles via the thioctate spacer. Gold nanoparticles stabilized with the PEO-b-PCL block (named Au/Block (x/y), where x/y is the mole feed ratio between HAuCl4 and PEO-b-PCL-TE) were prepared and analyzed. Au/Block (1/1), Au/Block (2/1), and Au/Block (3/1) nanoparticles were found to form stable dispersions in the organic solvents commonly used to dissolve the unlabeled block copolymer. The average diameter of the nanoparticles was determined by transmission electron microscopy (TEM) and found to be 6+/-2 nm. Au/Block (4/1) nanoparticle dispersions in organic solvents, on the other hand, were not stable and produced large gold clusters (50-100 nm). Cluster formation was attributed to the low grafting density of the block copolymer, which facilitates agglomeration. For Au/Block (12/1), along the same trend, only an insoluble product was isolated. Micelles in water were prepared by the slow addition of the dilute Au/Block solution in dimethylformamide into a large excess of water with vigorous stirring. Au/Block (1/1) and Au/Block (2/1) formed nanosized structures of 5-7 nm. TEM images of stained Au/Block (1/1) micelles, made in water, clearly showed the formation of core-shell structures. Au/Block (3/1) micelles, on the other hand, were not stable and large agglomerates a few microns in size were observed. The study focuses on the synthesis, characterization, and aggregation behavior of gold-loaded PEO-b-PCL block copolymer micelles, a potential system for drug delivery in conjunction with tissue and subcellular localization studies.     

Matrix Analysis to Additive Schwarz Methods

1.IntroductionWeconsiderthefollowingsecondorderellipticboundaryvalueproblem:Lu=f,infl,(1)u=o,onOfl,(2)whereLisaselfadjointpositiveoperatorandflCnd(15dS3)isapolyhedraldomain.Aweaksolutionhasthefollowingform:FinduEHf(fl)suchthat:LetVh:=M=Span{rki},where{ghi}couldbenodalbasisconsistingofpiece-wiselinearfunctionsorothersplinefunctions-Substitutingthefollowingsolutionuh=Zui4iintotheaboveweakformleadstoadiscreteequationAu=f,(3)whereA=(crij),oij=A(ofi,rkj).(4)Itiswellknownthatthec0efficientmat…     

Factors affecting the stability of foamed concentrated emulsions

This paper attempts to quantify the stability of three-phase systems generated by aerating concentrated water-in-oil emulsions. In such materials, which we call foamed emulsions, the continuous phase is itself a two-phase system. In this work, we modify and extend the method originally proposed by Iglesias et al. (Colloids and Surfaces A, 98 (1995) 167–174) to viscous three-phase foams. The modified method involves imparting a destabilising force to the sample to make the foam short-lived and measuring the change in height as a function of decay time. The change of height during decay represents the rate at which gas is evolved from the foamed emulsion and is logarithmic with time. The data treatment yields two values, the decay constant and half-life, which are used as a means of measuring and comparing stability. Two distinct decay mechanisms (smooth decay and catastrophic collapse) operate in foamed emulsions that are subjected to oscillations. For a given decay mechanism, the decay constant is an intrinsic property of the foamed emulsion and is independent of the imposed oscillations. Experimental results indicate that different bubble stabilising surfactants and emulsion morphology significantly affect the foam stability, and that the stability is inversely related to the initial expansion. Examination of the gas–emulsion interface shows a segregation of droplets, with smaller droplets found preferentially at the gas–emulsion interface.     

Synthesis of poly(arylene ether)s containing hole‐transport moieties from an isocyanate masked bisphenol

The design and synthesis of novel charge (hole‐ or electron‐) transport materials have been the focus of much research in recent years because of their wide variety of applications. In this study, three high molecular weight poly(arylene ether)s, 6a–c, containing naphthyl‐substituted benzidine moieties have been synthesized from carbamates derived from bisphenols. After masking with n‐propyl isocyanate, the carbamate is stable, can be readily purified by recrystallization from toluene, and can be polymerized directly with difluoro compounds under mild conditions. The resulting polymers possess high glass‐transition temperatures, excellent thermal stability, and good film‐forming properties. In comparison, the poly(arylene ether)s 6a′–c′, synthesized from unprotected bisphenol, have lower molecular weights and wider polydispersity and contain some brown impurities. Preliminary experiments show that both 6a and 6a′ can function well as hole‐transport materials in light‐emitting diodes. © 2000 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 38: 2740–2748, 2000     

Sediment Assessment of the Pchelina Reservoir,Bulgaria

The temporal dynamics of anthropogenic impacts on the Pchelina Reservoir is assessed based on chemical element analysis of three sediment cores at a depth of about 100–130 cm below the surface water. The ¹³⁷Cs activity is measured to identify the layers corresponding to the 1986 Chernobyl accident. The obtained dating of sediment cores gives an average sedimentation rate of 0.44 cm/year in the Pchelina Reservoir. The elements’ depth profiles (Ti, Mn, Fe, Zn, Cr, Ni, Cu, Mo, Sn, Sb, Pb, Co, Cd, Ce, Tl, Bi, Gd, La, Th and U_nat) outline the Struma River as the main anthropogenic source for Pchelina Reservoir sediments. The principal component analysis reveals two groups of chemical elements connected with the anthropogenic impacts. The first group of chemical elements (Mn, Fe, Cr, Ni, Cu, Mo, Sn, Sb and Co) has increasing time trends in the Struma sediment core and no trend or decreasing ones at the Pchelina sampling core. The behavior of these elements is determined by the change of the profile of the industry in the Pernik town during the 1990s. The second group of elements (Zn, Pb, Cd, Bi and U_nat) has increasing time trends in Struma and Pchelina sediment cores. The increased concentrations of these elements during the whole investigated period have led to moderate enrichments for Pb and U_nat, and significant enrichments for Zn and Cd at the Pchelina sampling site. The moderately contaminated, according to the geoaccumulation indexes, Pchelina Reservoir surface sediment samples have low ecotoxicity.     

An Advanced Materials Beamline for Energy Research (AMBER)

Detailed mapping of the electronic structure is a crucial part of explaining the behavior of materials. It is the electronic structure that determines the conductivity and thermal properties. It is the electronic structure that determines chemical properties. Knowledge about the electronic structure can help in determining the atomic structure of molecules.