Collisional dissociation of CH2Br+2 in selected internal energy states

The collisionally induced dissociation of CH₂Br⁺₂ to yield CH₂Br⁺ + Br has been investigated by photoelectronphotoion coincedence spectroscopy in which nominally zero kinetic electrons were detected. The reactant CH₂Br⁺₂ ions were produced by photoionzation with intenal energies of 0.0, 0.20 and 0.60 eV. For all three internal energies, the kinetic energy threshold for dissociation is just equal to the energy defect.     

Computation of affinity and selectivity: Binding of 2,4-diaminopteridine and 2,4-diaminoquinazoline inhibitors to dihydrofolate reductases

Binding energy calculations for complexes of mutant and wild-type human dihydrofolate reductases with 2,4-diaminopteridine and 2,4-diaminoquinazoline inhibitors are reported. Quantitative insight into binding energetics of these molecules is obtained from calculations based on force field energy evaluation and thermal sampling by molecular dynamics simulations. The calculated affinity of methotrexate for wild-type and mutant enzymes is reasonably well reproduced. Truncation of the methotrexate glutamate tail results in a loss of affinity by several orders of magnitude. No major difference in binding strength is predicted between the pteridines and the quinazolines, while the N-methyl group present in methotrexate appears to confer significantly stronger binding. The recent improvement, which is used here, of our linear interaction energy method for binding affinity prediction, as well as problems with treating charged and flexible ligands are discussed. This approach should be suitable in a drug discovery context for prediction of binding energies of new inhibitors prior to their synthesis, when some information about the binding mode is available.     

Characterization of alkyl-cobalamins formed on trapping of epoxide metabolites of 1,3-butadiene

Analytical methods facilitating studies of electrophilically reactive and genotoxic compounds in vitro and in vivo are needed. The strong nucleophile, cob(I)alamin, formed by reduction of Vitamin B12 [cob(III)alamin], may be used for trapping and analysis of 1,2-epoxides and other electrophiles. In the present study, cob(I)alamin is evaluated as an analytical tool for 1,2-epoxide metabolites (oxiranes) of 1,3-butadiene. Products of reaction of cob(I)alamin with 1,2-epoxy-3-butene (EB), 1,2:3,4-diepoxybutane (DEB), and 1,2-epoxy-3,4-butanediol (EBdiol) have been analyzed by reversed phase high performance liquid chromatography (HPLC) coupled on-line to electrospray ionization mass spectrometry (ESI-MS) and ultraviolet diode array detection (UV-DAD). It was shown that a specific alkyl-CbI complex is formed for each metabolite and that it was possible to discriminate between the products by HPLC-UV and by LC-MS. Quantification of DEB with the method by use of another 1,2-epoxide as an internal standard was successfully performed. The possibility of using cob(I)alamin for trapping and analysis of the three oxirane metabolites of 1,3-butadiene will facilitate quantitative comparisons of species in vitro with regard to metabolism of 1,3-butadiene.     

Dissociative photoionization and thermochemistry of dihalomethane compounds studied by threshold photoelectron photoion coincidence spectroscopy

The dissociative photoionization studies have been performed for a set of dihalomethane CH(2)XY (X,Y = Cl, Br, and I) molecules employing the threshold photoelectron photoion coincidence (TPEPICO) technique. Accurate dissociation onsets for the first and second dissociation limits have been recorded in the 10-13 eV energy range, and ionization potentials have been measured for these compounds. By using our experimental dissociation onsets and the known heat of formation of CH(2)Cl(2) molecule, it has been possible to derive the 0 and 298 K heats of formation of all six neutral dihalomethanes as well as their ionic fragments, CH(2)Cl(+), CH(2)Br(+), and CH(2)I(+), to a precision better than 3 kJ/mol. These new measurements serve to fill the lack of reliable experimental thermochemical information on these molecules, correct the old literature values by up to 19 kJ/mol, and reduce their uncertainties. From our thermochemical results it has also been possible to derive a consistent set of bond dissociation energies for the dihalomethanes.     

Dissociation kinetics of energy-selected Cp(2)Mn(+) ions studied by threshold photoelectron-photoion coincidence spectroscopy

Threshold photoelectron-photoion coincidence spectroscopy has been used to investigate the dissociation kinetics of the manganocene ion, Cp(2)Mn(+) (Cp = eta(5)-cyclopentadienyl). The Cp loss reaction was found to be extremely slow over a large ion internal energy range. By simulating the measured asymmetric time-of-flight peak shapes and breakdown diagram, the 0 K thermochemical dissociation limit for CpMn(+) production was determined to be 9.55 +/- 0.15 eV. A CpMn(+)-Cp bond energy of 3.43 eV was obtained by combining this CpMn(+) + Cp dissociation limit with the Cp(2)Mn adiabatic ionization energy of 6.12 +/- 0.07 eV. Combining the measured onset with known heats of formation of Cp and Mn(+), the Cp-Mn(+) bond energy was determined to be 3.38 +/- 0.15 eV. These results lead to 298 K heats of formation of Cp(2)Mn(+) and CpMn(+) of 863 +/- 7 and 935 +/- 16 kJ/mol, respectively. Finally, by combining these results with a previous measurement of the CpMn(CO)(3) --> CpMn(+) + 3CO + e(-) dissociation limit, we arrive at a new value for Delta(f)H degrees (298K)(CpMn(CO)(3)) of -424 +/- 17 kJ/mol.     

Cationic benzyl zirconium heteroscorpionates: synthesis and characterization of a novel ethylene polymerisation catalyst showing an unusual temperature dependent polymerisation mechanism

The reaction of (bpzmp)Zr(CH2Ph)3 with B(C6F5)3 produces the active ethylene polymerisation catalyst [(bpzmp)Zr(CH2Ph)2]+[PhCH2B(C6F5)3]- which showed a temperature dependent polymerisation mechanism identified by variable temperature 1H NMR analysis of the catalyst solution.     

Picosecond dynamics of large-amplitude motions of triphenylmethane molecules in alcohol solution

The relaxation dynamics in the excited states of crystal violet and ethyl violet in alcohol solutions were investigated by picosecond absorption recovery measurements. The experimental results were compared with the model for isomerization in solution proposed by Skinner and Wolynes. The relaxation rate as a function of viscosity displays the turnover behaviour predicted by this model to occur at very low friction.     

Triplet-doublet electronic energy transfer from benzophenone to the ketyl radical: viscosity and magnetic field effects

The influence of solvent viscosity and an external magnetic field on the rate constant of electronic energy transfer from triplet bonzophenone to the ketyl radical is studied; it is concluded that the transfer is mediated by electron exchange.     

Coverage effects and the nature of the metal-sulfur bond in S/Au(111): high-resolution photoemission and density-functional studies

The bonding of sulfur to surfaces of gold is an important subject in several areas of chemistry, physics, and materials science. Synchrotron-based high-resolution photoemission and first-principles density-functional (DF) slab calculations were used to study the interaction of sulfur with a well-defined Au(111) surface and polycrystalline gold. Our experimental and theoretical results show a complex behavior for the sulfur/Au(111) interface as a function of coverage and temperature. At small sulfur coverages, the adsorption of S on fcc hollow sites of the gold substrate is energetically more favorable than adsorption on bridge or a-top sites. Under these conditions, S behaves as a weak electron acceptor but substantially reduces the density-of-states that gold exhibits near the Fermi edge. As the sulfur coverage increases, there is a weakening of the Au-S bonds (with a simultaneous reduction in the Au --> S charge transfer and a modification in the S sp hybridization) that facilitates changes in adsorption site and eventually leads to S-S bonding. At sulfur coverages above 0.4 ML, S(2) and not atomic S is the more stable species on the gold surface. Formation of S(n)(n > 2) species occurs at sulfur coverages higher than a monolayer. Very similar trends were observed for the adsorption of sulfur on polycrystalline surfaces of gold. The S atoms bonded to Au(111) display a unique mobility/reactivity not seen on surfaces of early or late transition metals.     

Chaotic particle motion under linear surface waves

We investigate the motion of infinitesimal particles in the flow field inside the fluid under a traveling surface wave. It is shown that, even for two-dimensional waves, a superposition of two or more traveling harmonic waves is enough to generate chaotic particle motion, i.e., Lagrangian chaos. (c) 1996 American Institute of Physics.