xMAP-based analysis of three most prevalent staphylococcal toxins in Staphylococcus aureus cultures

Detection of staphylococcal toxins presents a great interest for medical diagnostics. Screening of clinical samples for the presence of several types of staphylococcal toxins using traditional methods—biological tests on animals or cell cultures as well as ELISA—is laborious. Multiplex detection methods would simplify testing. We have designed an xMAP-based assay to detect three staphylococcal toxins—enterotoxins A and B (SEA and SEB) and toxic shock syndrome toxin (TSST)—in cultural supernatants obtained from different strains of Staphylococcus aureus. The limits of detection of SEA, SEB, and TSST multiplex detection in S. aureus growth medium were 10, 1,000, and 5 pg/mL, respectively. Fifty-nine samples of S. aureus cultural supernatants were tested with the xMAP assay. The developed assay has proved highly effective detection of the natural toxins in the samples obtained due to bacterial cells cultivation. In prospect, the developed test system can be used in clinical diagnostics and in monitoring of foodstuffs and environmental objects.     

Ru(II)-Catalyzed Hydroarylation of in situ Generated 3,3,3-Trifluoro-1-propyne by C−H Bond Activation: A Facile and Practical Access to β-Trifluoromethylstyrenes

In this study, a practical and straightforward synthesis of β-(E)-trifluoromethylstyrenes by ruthenium-catalyzed C−H bond activation was developed. The readily available and inexpensive 2-bromo-3,3,3-trifluoropropene (BTP), a non-ozone depleting reagent, was used as a reservoir of 3,3,3-trifluoropropyne. With this approach, the monofunctionalization of a panel of heteroarenes was possible in a safe and scalable manner (23 examples, up to 87 % yield). Mechanistic investigations and density functional theory (DFT) calculations were also conducted to get a better understanding of the mechanism of this transformation. These studies suggested that 1) a cyclometallated ruthenium complex enabled the transformation, 2) this complex exhibited high efficiency in this transformation compared to the commercially available [RuCl₂(p-cymene)]₂ and 3) the mechanism proceeded through a bis-cyclometallated ruthenium intermediate for the carboruthenation step.     

3-Cyanoazolo[5,1-c][1,2,4]triazines: synthesis and antiviral activity

Chemistry of Heterocyclic Compounds - A series of azolo[5,1-c][1,2,4]triazines containing a cyano group were prepared as analogs of the drug Triazavirin (riamilovir). Sodium...     

Positive numerical splitting method for the Hull and White 2D Black–Scholes equation

We consider the locally one‐dimensional backward Euler splitting method to solve numerically the Hull and White problem for pricing European options with stochastic volatility in the presence of a mixed derivative term. We prove the first‐order convergence of the time‐splitting. The parabolic equation degenerates on the boundary x = 0 and we apply a fitted finite volume scheme to the equation to resolve the degeneracy and derive the fully discrete problem as we also investigate the discrete maximum principle. Numerical experiments illustrate the efficiency of our difference scheme. © 2014 Wiley Periodicals, Inc. Numer Methods Partial Differential Eq 31: 822–846, 2015     

Liouville mode in gauge/gravity duality

We establish solutions corresponding to AdS\(_4\) static charged black holes with inhomogeneous two-dimensional horizon surfaces of constant curvature. Depending on the choice of the 2D constant curvature space, the metric potential of the internal geometry of the horizon satisfies the elliptic wave/elliptic Liouville equations. We calculate the charge diffusion and transport coefficients in the hydrodynamic limit of gauge/gravity duality and observe the exponential suppression in the diffusion coefficient and in the shear viscosity-per-entropy density ratio in the presence of an inhomogeneity on black hole horizons with planar, spherical, and hyperbolic geometry. We discuss the subtleties of the approach developed for a planar black hole with inhomogeneity distribution on the horizon surface in more detail and find, among others, a trial distribution function, which generates values of the shear viscosity-per-entropy density ratio falling within the experimentally relevant range. The solutions obtained are also extended to higher-dimensional AdS space. We observe two different DC conductivities in 4D and higher-dimensional effective strongly coupled dual media and formulate conditions under which the appropriate ratio of different conductivities is qualitatively the same as that observed in an anisotropic strongly coupled fluid. We briefly discuss ways of how the Liouville field could appear in condensed matter physics and outline prospects of further employing the gauge/gravity duality in CMP problems.     

Recent Progress in Direct Introduction of Fluorinated Groups on Alkenes and Alkynes by means of CH Bond Functionalization

The direct introduction of fluorine and fluorinated building blocks has recently attracted a lot of attention and particularly the direct functionalization of alkenes and alkynes. This review will highlight the major progress recently made in that field, with a focus on photocatalyzed transformations, base‐promoted processes, and transition metal‐catalyzed functionalization of alkenes and alkynes. Special attention will be paid to explanations of the reaction mechanisms.     

Accelerated Nuclear Magnetic Resonance Spectroscopy with Deep Learning

Nuclear magnetic resonance (NMR) spectroscopy serves as an indispensable tool in chemistry and biology but often suffers from long experimental times. We present a proof‐of‐concept of the application of deep learning and neural networks for high‐quality, reliable, and very fast NMR spectra reconstruction from limited experimental data. We show that the neural network training can be achieved using solely synthetic NMR signals, which lifts the prohibiting demand for a large volume of realistic training data usually required for a deep learning approach.     

Theory of the orientational ordering for dimers with conformational flexibility

In the self-consistent field approximation a theory of the orientational ordering is developed for the melt of dimers containing two mesogenic fragments capable of conformational reorganization. Discrete conformations of the dimers (rotational isomers) are characterized by the values of valence angles. Both three-dimensional and two-dimensional melts are considered. It is shown that the presence of bent isomers in the melt reduces the temperature of the phase transition to the anisotropic phase. For a three-dimensional system with first-order phase transition to the ordered state, the jump of the order parameter at the transition point for dimers with conformational flexibility appears to be greater than for rigid dimers. For dimers with two isomers (a linear and a bent one) the order parameter and the statistical weight of the linear isomer at the transition point depend nonmonotonously on the statistical weight of this isomer in the isotropic phase. The effect of “supercooling” of the isotropic phase for linear conformations of flexible dimers is discussed.     

Influence of connectivity and porosity on ligand-based luminescence in zinc metal-organic frameworks

Applications of metal-organic frameworks (MOFs) require close correlation between their structure and function. We describe the preparation and characterization of two zinc MOFs based on a flexible and emissive linker molecule, stilbene, which retains its luminescence within these solid materials. Reaction of trans-4,4'-stilbene dicarboxylic acid and zinc nitrate in N,N-dimethylformamide (DMF) yielded a dense 2-D network, 1, featuring zinc in both octahedral and tetrahedral coordination environments connected by trans-stilbene links. Similar reaction in N,N-diethylformamide (DEF) at higher temperatures resulted in a porous, 3-D framework structure, 2. This framework consists of two interpenetrating cubic lattices, each featuring basic zinc carboxylate vertices joined by trans-stilbene, analogous to the isoreticular MOF (IRMOF) series. We demonstrate that the optical properties of both 1 and 2 correlate with the local ligand environments observed in the crystal structures. Steady-state and time-resolved spectroscopic measurements reveal that the stilbene linkers in the dense structure 1 exhibit a small degree of interchromophore coupling. In contrast, the stilbenoid units in 2 display very little interaction in this low-density 3-D framework, with excitation and emission spectra characteristic of monomeric stilbenes, similar to the dicarboxylic acid in dilute solution. In both cases, the rigidity of the stilbene linker increases upon coordination to the inorganic units through inhibition of torsion about the central ethylene bond, resulting in luminescent crystals with increased emission lifetimes compared to solutions of trans-stilbene. The emission spectrum of 2 is found to depend on the nature of the incorporated solvent molecules, suggesting use of this or related materials in sensor applications.