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121.
Peled D Daube SS Naaman R 《Langmuir : the ACS journal of surfaces and colloids》2008,24(20):11842-11846
The adsorption of DNA on surfaces is a widespread procedure and is a common way for fabrication of biosensors, DNA chips, and nanoelectronic devices. Although the biologically relevant and prevailing in vivo structure of DNA is its double-stranded (dsDNA) conformation, the characterization of DNA on surfaces has mainly focused on single-stranded DNA (ssDNA). Studying the structure of dsDNA on surfaces is of invaluable importance to microarray performance since their effectiveness relies on the ability of two DNA molecules to hybridize and remain stable. In addition, many of the enzymatic transactions performed on DNA require dsDNA, rather than ssDNA, as a substrate. However, it is not established that adsorbed dsDNA remains in its structure and does not denature. Here, two methodologies have been developed for distinguishing between surface-adsorbed single- and double-stranded DNA. We demonstrate that, upon formation of a dense monolayer, the nonthiolated strand comprising the dsDNA is released and the monolayer consists of mostly ssDNA. The fraction of dsDNA within the ssDNA monolayer depends on the length of the oligomers. A likely mechanism leading to this rearrangement is discussed. 相似文献
122.
The predetermined patterned adsorption of two types of nanoparticles on the same substrate may be of considerable importance in various applications, among others, to enhance the absorption of semiconductor nanoparticles by the plasmonic effect of metal NPs. We describe here a simple method for self-assembling 2D lateral patterns in which both gold and semiconductor nanoparticles are adsorbed, each in a predesigned area. Our method is based on a one-step lithographic process and the adsorption of two distinct self-assembled monolayers that can selectively bind only one type of nanoparticle. 相似文献
123.
Wilner OI Guidotti C Wieckowska A Gill R Willner I 《Chemistry (Weinheim an der Bergstrasse, Germany)》2008,14(26):7774-7781
Three different methods to investigate the activity of a protein kinase (casein kinase, CK2) are described. The phosphorylation of the sequence-specific peptide (1) by CK2 was monitored by electrochemical impedance spectroscopy (EIS). Phosphorylation of the peptide monolayer assembled on a Au electrode yields a negatively charged surface that electrostatically repels the negatively charged redox label [Fe(CN)6]3-/4-, thus increasing the interfacial electron-transfer resistance. The phosphorylation process by CK2 is further amplified by the association of the anti-phosphorylated peptide antibody to the monolayer. Binding of the antibody insulates the electrode surface, thus increasing the interfacial electron-transfer resistance in the presence of the redox label. This method enabled the quantitative analysis of the concentration of CK2 with a detection limit of ten units. The second method employed involved contact-angle measurements. Although the peptide 1-functionalized electrode revealed a contact angle of 67.5 degrees , phosphorylation of the peptide yielded a surface with enhanced hydrophilicity, 36.8 degrees. The biocatalyzed cleavage of the phosphate units with alkaline phosphatase regenerates the hydrophobic peptide monolayer, contact angle 55.3 degrees . The third method to characterize the CK2 system involved chemical force measurements between the phosphorylated peptide monolayer associated with the Au surface and a Au tip functionalized with the anti-phosphorylated peptide antibody. Although no significant rupture forces existed between the modified tip and the 1-functionalized surface (6+/-2 pN), significant rupture forces (multiples of 120+/-20 pN) were observed between the phosphorylated monolayer-modified surface and the antibody-functionalized tip. This rupture force is attributed to the dissociation of a simple binding event between the phosphorylated peptide and the fluorescent antibody (Fab) binding region. 相似文献
124.
van Ede K Li A Antunes-Fernandes E Mulder P Peijnenburg A Hoogenboom R 《Analytica chimica acta》2008,617(1-2):238-245
Citrus fruit and citrus fruit products, like grapefruit, lemon and marmalade were shown to contain aryl hydrocarbon receptor (AhR) agonists, as detected with the DR CALUX bioassay. This is of interest regarding the role of the Ah-receptor pathway in the adverse effects of dioxins, PCBs and other aromatic hydrocarbons. So far it is unclear which compounds in citrus fruit are responsible for the AhR-mediated activity and whether regular exposure to these compounds can cause effects comparable to, e.g. dioxins. The present study aimed at developing a method for identifying unknown Ah-receptor agonists in citrus products based on bioassay directed analysis, using marmalade as a first target. Following extraction with hexane and purification on an aluminium oxide-column, the extract was fractionated by HPLC using a C-18 semi-preparative column. Fractions were extracted, solvent-exchanged into dimethylsulfoxide and subsequently tested with DR CALUX. Extracts were shown to contain primarily coumarins, furocoumarins (FCs) and polymethoxyflavones (PMFs). Identification of fractions most active in the bioassay via LC/MS revealed that bergapten (an FC) is the most important Ah-receptor agonist in marmalade. The approach and method developed resulted in the successful identification of the bioactive component. However, potential pitfalls of the procedure will be discussed. 相似文献
125.
We introduce the G-blossom of a polynomial by altering the diagonal property of the classical blossom, replacing the identity function by arbitrary linear functions G=G(t). By invoking the G-blossom, we construct G-Bernstein bases and G-Bézier curves and study their algebraic and geometric properties. We show that the G-blossom provides the dual functionals for the G-Bernstein basis functions and we use this dual functional property to prove that G-Bernstein basis functions form a partition of unity and satisfy a Marsden identity. We also show that G-Bézier curves share several other properties with classical Bézier curves, including affine invariance, interpolation of end points, and recursive algorithms for evaluation and subdivision. We investigate the effect of the linear functions G on the shape of the corresponding G-Bézier curves, and we derive some necessary and sufficient conditions on the linear functions G which guarantee that the corresponding G-Bézier curves are of Pólya type and variation diminishing. Finally we prove that the control polygons generated by recursive subdivision converge to the original G-Bézier curve, and we derive the geometric rate of convergence of this algorithm. 相似文献
126.
Let G be a graph on n vertices, with maximal degree d, and not containing as an induced subgraph. We prove:
- 1.
- 2.
127.
The following conjecture may have never been explicitly stated, but seems to have been floating around: if the vertex set
of a graph with maximal degree Δ is partitioned into sets V
i
of size 2Δ, then there exists a coloring of the graph by 2Δ colors, where each color class meets each V
i
at precisely one vertex. We shall name it the strong 2Δ-colorability conjecture. We prove a fractional version of this conjecture. For this purpose, we prove a weighted generalization of a theorem of Haxell,
on independent systems of representatives (ISR’s). En route, we give a survey of some recent developments in the theory of
ISR’s.
The research of the first author was supported by grant no 780/04 from the Israel Science Foundation, and grants from the
M. & M. L. Bank Mathematics Research Fund and the fund for the promotion of research at the Technion.
The research of the third author was supported by the Sacta-Rashi Foundation. 相似文献
128.
129.
Wasserman V Kizelsztein P Garbuzenko O Kohen R Ovadia H Tabakman R Barenholz Y 《Langmuir : the ACS journal of surfaces and colloids》2007,23(4):1937-1947
The piperidine nitroxide tempamine (TMN) is a cell-permeable, stable radical having antioxidant, anticancer, and proapoptotic and/or pronecrotic activities, as was demonstrated by us in cell cultures. We also demonstrated synergism between TMN and doxorubicin in doxorubicin-sensitive and doxorubicin-resistant cell lines. Treatment of the C26 mouse colon carcinoma model in vivo also demonstrated synergism between TMN and doxorubicin in sterically stabilized liposomes (SSLs) containing TMN (SSL-TMN) and those containing doxorubicin. The above effects of TMN and SSL-TMN motivated us to develop and optimize the SSL-TMN formulation so that it will be able to reach the disease site with a sufficiently high TMN level and a release rate needed to achieve a therapeutic effect. Because TMN is an amphipathic weak base, it was remote loaded by an intraliposome high/extraliposome low transmembrane ammonium sulfate gradient. The kinetics and level of TMN loading were monitored by cyclic voltammetry (CV) and electron paramagnetic resonance (EPR); the latter also indicates TMN precipitation in the intraliposomal aqueous phase. The regeneration of the original CV and EPR signals by the ionophore nigericin indicates that TMN remained fully intact during loading and release. The cardinal role of the transmembrane ammonium ion gradient in the loading process was proven by the use of the selective ionophores nonactin (for NH4+) and nigericin (for H+). The anion of the ammonium salts affects loading stability and the rate of TMN release, both mediated through the TMN state of aggregation in the intraliposomal aqueous phase. The greater the TMN salt precipitation, the slower the TMN release rate. This was supported by measurement of osmolality, which is inversely related to TMN salt precipitate. Precipitation is in the order SO4(-2)>Cl-1>glucuronate-1. Liposome lipid composition, magnitude of the transmembrane ammonium ion gradient, and type of anion of the ammonium salt determine the amount of TMN loaded and its release rate. 相似文献
130.
Fragouli D Kitsopoulos TN Chiodo L Della Sala F Cingolani R Ray SG Naaman R 《Langmuir : the ACS journal of surfaces and colloids》2007,23(11):6156-6162
In this paper, we present a new approach for studying the electronic properties of self-assembled monolayers and their interaction with a conductive substrate, the low-energy photoelectron imaging spectroscopy (LEPIS). LEPIS relies on imaging of photoelectrons ejected from a conductive substrate and subsequently transmitted through organic monolayers. Using this method, we measure the relative work-function of alkanethiols of different length on gold substrate, and we are able to follow the changes occurring when the surface coverage is varied. We also computed the work-function of model alkanethiols using a plane-wave density functional theory approach, in order to demonstrate the correlation between changes in the work-function with the monolayer organization and density. 相似文献