Fluorous,chromatography-free Mitsunobu reaction

[formula: see text] The reaction of secondary and primary alcohols with highly fluorinated 3,4,5-tris(5,5,6,6,7,7,8,8,9,9,10,10,11,11,12,12,12-heptadecafluorododecan- 1-yloxy)benzoic acid in the presence of Ph3P and DIAD in THF at room temperature (fluorous Mitsunobu) resulted in a simple, chromatography-free isolation protocol with excellent yields (83-96%).     

Symmetry justification of Lorenz’ maximum simplification

In 1960 Edward Lorenz (1917–2008) published a pioneering work on the ‘maximum simplification’ of the barotropic vorticity equation. He derived a coupled three-mode system and interpreted it as the minimum core of large-scale fluid mechanics on a ‘finite but unbounded’ domain. The model was obtained in a heuristic way, without giving a rigorous justification for the chosen selection of modes. In this paper, it is shown that one can legitimate Lorenz’ choice by using symmetry transformations of the spectral form of the vorticity equation. The Lorenz three-mode model arises as the final step in a hierarchy of models constructed via the component reduction by means of symmetries. In this sense, the Lorenz model is indeed the ‘maximum simplification’ of the vorticity equation.     

Light Energy Collection in a Porphyrin–Imide–Corrole Ensemble

An assembly consisting of three units, that is, a meso‐substituted corrole ( C3 ), 1,8 naphthaleneimide ( NIE ), and a Zn porphyrin ( ZnP ), has been synthesized. NIE is connected to C3 through a 1,3‐phenylene bridge and to the ZnP unit through a direct C? C bond. The convergent synthetic strategy includes the preparation of a trans‐A₂B‐corrole possessing the imide unit, followed by Sonogashira coupling with a meso‐substituted A₃B‐porphyrin. The photophysical processes in the resulting triad ZnP-NIE-C3 are examined and compared with those of the corresponding C3-NIE dyad and the constituent reference models C3 , NIE , and ZnP . Excitation of the NIE unit in C3-NIE leads to a fast energy transfer of 98 % efficiency to C3 with a rate k_en=7.5×10¹⁰ s^?1, whereas excitation of the corrole unit leads to a reactivity of the excited state identical to that of the model C3 , with a deactivation rate to the ground state k=2.5×10⁸ s^?1. Energy transfer to C3 and to ZnP moieties follows excitation of NIE in the triad ZnP-NIE-C3 . The rates are k_en=7.5×10¹⁰ s^?1 and k_en=2.5×10¹⁰ s^?1 for the sensitization of the C3 and ZnP unit, respectively. The light energy transferred from NIE to Zn porphyrin unit is ultimately funneled to the corrole component, which is the final recipient of the excitation energy absorbed by the different components of the array. The latter process occurs with a rate k_en=3.4×10⁹ s^?1 and 89 % efficiency. Energy transfer processes take place in all cases by a Förster (dipole–dipole) mechanism. The theory predicts quite satisfactorily the rate for the ZnP/C3 couple, where components are separated by about 23 Å, but results in calculated rates that are one to two orders of magnitude higher for the couples NIE/ZnP (D/A) and NIE/C3, which are separated by distances of about 14 and 10 Å, respectively.     

Kissinger equation versus glass transition phenomenology

The applicability of the Kissinger equation for the evaluation of apparent activation energy corresponding to glass transition kinetics is examined. Theoretically simulated data based on the generally accepted Tool–Narayanaswamy–Moynihan model were used to represent relevant cases of structural relaxation behavior. The values of the apparent activation energy determined by the Kissinger equation were, despite the linearity of the dependencies, in major disagreement with the original values of ?h ^* used for the simulation of the source data. Furthermore, a large dependence of the ?h _Kis ^* evaluation (performed using the Kissinger equation) on the thermal history of the glass was found. The latter represents an unacceptable systematic error in the methodology, implying the incorrectness of the Kissinger equation usage for the evaluation of “glass transition activation energy”. This study addresses the currently widespread (incorrect) usage of the Kissinger equation for the above-mentioned purpose.     

Synthesis and characterisation of PEG-peptide surfaces for proteolytic enzyme detection

Peptide surfaces were obtained by the covalent immobilisation of fluorescently labelled pentapeptides carboxyfluorescein–glycine–arginine–methionine–leucine–glycine, either directly or through a poly(ethylene glycol) (PEG) linker on modified silicon wafers. Each step during the preparation of the peptide surfaces was confirmed by several surface characterisation techniques. Time-of-flight secondary ion mass spectrometry (ToF-SIMS) and X-ray photoelectron spectroscopy were used to determine the surface composition, the wafers philicity was measured by contact angle and atomic force microscopy was used to investigate the surface morphology. Exposure of the peptide surfaces to trypsin resulted in the release of a fluorescently labelled peptide product, which allowed the kinetics of the enzymatic reaction to be followed with the aid of fluorescence spectroscopy. The electrospray ionisation mass spectrometry analysis of the post-digestion solution confirmed that the pentapeptides attached to the solid support undergo specific trypsin hydrolysis at the C-terminus of the arginine residues. Detailed surface analyses before and after the enzyme action was performed using ToF-SIMS. Because of the limited accessibility of the short peptide directly attached to the surface, a quantitative yield of enzymatic hydrolysis was observed only in case when the peptide was bound through the PEG linker. The insertion of the PEG linker increased the number of immobilised peptides and the rate of enzymatic digestion which consequently improved the quality of the enzyme assays. The described approach may be used for different peptide sequences designed for other proteases.

Transgenic Expression and Functional Characterization of Human Platelet Derived Growth Factor BB (hPDGF-BB) in Tobacco (Nicotiana tabacum L.)

Recombinant human platelet derived growth factor BB (rhPDGF-BB) is clinically approved for treating diabetic neuropathic ulcers. Plant-based expression systems offer less expensive ways of producing recombinant drugs, which do not require purification for clinical use. From this perspective, rhPDGF-BB is an ideal candidate for expression in plants as it can be applied topically. Here, we report a proof of concept study, in which rhPDGF-BB was expressed in tobacco plants, and its biological activity was tested in vitro. The mature human platelet derived growth factor BB (hPDGF-BB) gene was codon-optimized for tobacco and fused with ER targeting and retention signals, 5′ and 3′ UTRs of arc5-1 gene along with CaMV 35S promoter, and then, transferred by Agrobacterium-mediated transformation. Gene and protein expression of hPDGF-BB were confirmed by PCR and immunoblot studies. Bioactivity of hPDGF-BB expressed protein was determined by in vitro assays such as proliferation and migration in NIH3T3 cells. Our data reveals that total soluble proteins containing hPDGF-BB from transgenic plants showed a 4.5-fold increase in fibroblast proliferation compared to non-transgenic plants. Furthermore, plant-made rhPDGF-BB induced chemotaxis of treated cells and promoted wound healing in vitro. These results clearly demonstrate that functionally active rhPDGF-BB protein can be produced in plants and might have therapeutic benefits.     

Urease adsorption and activity on magnetite nanoparticles functionalized with monofunctional and bifunctional surface layers

The surface of magnetite nanoparticles was coated with functional polysiloxane layers using reaction of hydrolytic copolycondensation of tetraethoxysilane and 3-aminopropyltriethoxysilane (or N-[3-trimethoxysilylpropyl]ethylendiamine), and also that of tetraethoxysilane, 3-aminopropyltriethoxysilane and methyltriethoxysilane (or n-propyltriethoxysilane). It was shown that these functionalized magnetically controllable particles (about 60–150 nm in size as aggregates), as opposed to magnetite, adsorb urease well from aqueous solutions (up to 1 g/g), and that the level of residual activity of adsorbed layers is up to 84 % in the case of a bifunctional sample. It was established that the activity of immobilized urease is normally gradually reduced during storage of the samples, but in the case of ethylenediamine functional group is not decreased for 45 days. The synthesized samples are promising for use as magnetically directed biocatalysts.