Measurements of cavitation bubble dynamics based on a beam-deflection probe

We present an optodynamic measurement of a laser-induced cavitation bubble and its oscillations based on a scanning technique using a laser beam-deflection probe. The deflection of the beam was detected with a fast quadrant photodiode which was built into the optical probe. The applied experimental setup enabled us to carry out one- or two-dimensional scanning of the cavitation bubble, automatic control of the experiment, data acquisition and data processing. Shadow photography was used as a comparative method during the experiments.     

Neobavaisoflavone May Modulate the Activity of Topoisomerase Inhibitors towards U-87 MG Cells: An In Vitro Study

Despite many advances in therapy, glioblastoma (GB) is still characterized by its poor prognosis. The main reason for this is unsuccessful treatment, which slightly extends the duration of remission; thus, new regimens are needed. One of many types of chemotherapeutics that are being investigated in this field is topoisomerase inhibitors, mainly in combination therapy with other drugs. On the other hand, the search for new anti-cancer substances continues. Neobavaisoflavone (NBIF) is a natural compound isolated from Psoralea corylifolia L., which possesses anti-oxidant, anti-inflammatory, and anti-cancer properties. The aim of this study was to evaluate the effect of NBIF in human U-87 MG glioblastoma cells in comparison to normal human NHA astrocytes, and to examine if it influences the activity of irinotecan, etoposide, and doxorubicin in this in vitro model. We demonstrated that NBIF decreases U-87 MG cells viability in a dose-dependent manner. Furthermore, we found that it inhibits cell growth and causes glutathione (GSH) depletion more intensely in U-87 MG cells than in astrocytes. This study also provides, for the first time, evidence of the potentialization of the doxorubicin effect by NBIF, which was shown by the reduction in the viability in U-87 MG cells.     

VUV photoionisation of free azabenzenes: Pyridine, pyrazine, pyrimidine, pyridazine and s-triazine

Photoionisation mass spectrometry was used to obtain the fragmentation pathways of pyridine, pyridazine, pyrimidine, pyrazine and s-triazine molecules upon absorption of 23.0, 15.7 and 13.8 eV synchrotron photons. The ionic fragments observed vary from molecule to molecule, however C₂H₂⁺, HCN⁺and HCNH⁺ are common to all five molecules at the three photon energies. Furthermore, the presence of C₂H₂N₂⁺, C₃H₃N⁺ and C₄H₄⁺ in the spectra of some of the molecules suggests dissociation pathways via loss of HCN moieties. The respective parent cations, m/q=79, 80 and 81 have a greater yield at low photon energies when compared to the most intense fragment peak in each spectra. We recorded two of the fragment cation yields, as well as the parent photoion yield curves of pyridine, pyridazine, and pyrimidine in the 8–30 eV range. The formation of abundant cation fragments show a strong propensity of the molecules for dissociation after the absorption of VUV photons higher than 14 eV. The differences in relative fragment yields from molecule to molecule, and when changing the excitation energy, suggest significant bond rearrangements and nuclear motion during the dissociation time. Thus, bond cleavage is dependent on the photon energy deposited in the molecule and on intramolecular reactivity. With the aid of photoion yield curves and energy estimations we have assigned major peaks in the spectra and discussed their fragmentation pathways.     

Modelling of the blanking process of high-carbon steel using Lemaitre damage model

This paper presents a methodology to model a blanking process using a continuum mechanical damage model. A variant of the Lemaitre model, in which the quasi-unilateral conditions are taken into consideration to modify the damage behavior under compressive stress states, is selected as material model. S45C high-carbon steel is analyzed experimentally. To characterize the damage behavior of the material, notched round bar tensile tests with three different notch radii (6 mm, 10 mm, and 20 mm) using image analysis are performed. Using digital image processing, the strain at the deformation zone can be computed for the load–strain curves. Those curves are used as an objective function to determine the parameters of the Lemaitre damage model. The experimental results are compared with the results of the FE analysis of the tensile test. The identified model parameters are used in numerical investigations of axisymmetric blanking. The effect of the model's extension to quasi-unilateral damage evolution is discussed. The crack progress in high-carbon steel sheet during blanking and the final sheared part morphology are predicted and compared with the experimental results. Sheared surface and burr height obtained by the analysis coincide with the results of the blanking experiment.     

Optimum folding pathways of proteins: their determination and properties

We develop a dynamic optimization technique for determining optimum folding pathways of proteins starting from different initial configurations. A coarse-grained Go model is used. Forces acting on each bead are (i) the friction force, (ii) forces from bond length constraints, (iii) excluded volume constraints, and (iv) attractive forces between residue pairs that are in contact in the native state. An objective function is defined as the total attractive energy between nonbonded residues, which are neighbors in the native state. The objective function is minimized over all feasible paths, satisfying bond length and excluded volume constraints. The optimization problem is nonconvex and contains a large number of constraints. An augmented Lagrangian method with a penalty barrier function was used to solve the problem. The method is applied to a 36-residue protein, chicken villin headpiece. Sequences of events during folding of the protein are determined for various pathways and analyzed. The relative time scales are compared and scaled according to experimentally measured events. Formation times of the helices, turn, and the loop agree with experimental data. We obtain the overall folding time of the protein in the range of 600 ns-1.2 micros that is smaller than the experimental result of 4-5 micros, showing that the optimal folding times that we obtain may be possible lower bounds. Time dependent variables during folding and energies associated with short- and long-range interactions between secondary structures are analyzed in modal space using Karhunen-Loeve expansion.     

Synthesis and styrene polymerization properties of dinuclear half-titanocene complexes with xylene linkage

The new dinuclear half-sandwich complexes of titanium with xylene bridge, [Ti(η⁵-cyclopentadienyl)Cl₂L]₂[CH₂-C₆H₄-CH₂] (L = Cl (3), L = O-2,6-iPr₂C₆H₃ (4), L = N(SiMe₃)(2,6-Me₂C₆H₃) (5)), have been synthesized. The complexes 4 and 5 have been prepared by the reaction of the complex 3 with the corresponding lithium salts of aryloxy and anilide. Structure of these complexes has been characterized by ¹H and ¹³C NMR. The change of substituent from chloride, 3, to anilide, 5, at titanium resulted in chemical shift change of cyclopentadienyl protons from 6.92 and 6.79 to 6.13 and 5.95 ppm probably due to the positive electron density delivery from the anilide group. It was found that all three half-titanocenes were effective catalyst for the generation of SPS (syndiotactic polystyrene). Xylene bridged dinuclear catalyst (4) with aryloxy substituent exhibited very high activity (458 kg of SPS/(mol of [Ti])h), at 40 °C, whereas the analogous hexamethylene bridged dinuclear half-titanocene catalyst (7) showed a lower activity (80.7 kg of SPS/(mol of [Ti])h) under the same conditions. While the catalyst 3 was the most active catalyst among three complexes less than 40 °C the catalyst 5 exhibited the highest activity at 70 °C. Xylene linkage was suggested to be too stiff to permit any kind of intramolecular interaction between two active centers. Lack of steric disturbance due to the rigidity of the xylene bridge might give rise to the similar properties of dinuclear metallocene to the corresponding mononuclear metallocene to result in not only the facile coordination of monomer at the active center to lead high activity but also the easier β-H elimination comparing to the dinuclear catalysts with the flexible bridge to result in the formation of lower molecular weight polymer.     

Analysis of optodynamic sources generated during laser-induced breakdown in water

We propose a method for evaluating the size of the laser-induced breakdown region in water based on the detection and analysis of optodynamic waves. The breakdown region is an optodynamic source of pressure waves that propagate into the surrounding liquid as an ultrasonic pulse. In the experiment the optical breakdown was generated by a standard ophthalmic Nd:YAG laser with a pulse duration of 10 ns and a maximum energy per pulse of 10 mJ. The pulses were detected inside the liquid with a laser-beam deflection probe. The waveforms were captured in the far-field and analyzed. The analysis provides information about the apparent size of the optodynamic source, which is directly related to the size of the breakdown region. The proposed method can be adapted for online monitoring.     

The synthesis of 12-membered macrocycles containing a C1–C8 alkene unit via ring-closing metathesis

Model cross and ring-closing metathesis strategies toward the C1–C8-linear carbon skeleton are presented. The introduction of a four-atom tether enables the formation of 12-membered rings in good-to-excellent yields and stereoselectivity. Furthermore, the study revealed that the cross-metathesis approach and the formation of medium ring sizes via ring-closing metathesis are much less favorable.