Bioluminescent reporter bacteria detect contaminants in soil samples

Applied Biochemistry and Biotechnology - Reporter strains of bacteria were tested using soil samples from several sites near a leaking fuel oil storage facility. The reporter bacteria utilized the...     

Single nanocrystal arrays on patterned poly(ethylene glycol) copolymer microstructures using selective wetting and drying

Single nanocrystal arrays were fabricated on sub-microwells of poly(ethylene glycol) (PEG) copolymer using selective wetting on the hydrophilic regions of the exposed substrate surface and subsequent drying. Templates were produced by molding a thin film of a PEG-based random copolymer on hydrophilic substrates such as glass or silicon dioxide. The polymeric microstructures provide a topographical barrier around the well, which makes it possible to create nanocrystal arrays with controlled geometrical features. The size of the nanocrystal was found to decrease with decreasing well size and also decrease with decreasing topological height. A simple empirical equation was derived to predict the size of the crystal as a function of the pattern size and height, which is in good agreement with the experimental data.     

Sequential versus direct multiphoton absorption

We present results of exact calculations on a three-level Morse oscillator modeling HF which suggest that multiphoton absorption proceeds by sequential single-level transitions, transitions arising from coupling between non-adjacent states being dynamically negligible. The time-dependent Schrödinger equation is integrated in the Floquet formalism.     

Oxygen sensitivity of algal H2- production

Applied Biochemistry and Biotechnology - Photoproduction of H2 by green algae utilizes electrons originating from the photosynthetic oxidation of water and does not require metabolic intermediates....     

CI method for the study of general molecular potentials

A method of configuration interaction designed for general molecular potentials is outlined. The technique employed to arrive at a symmetrized multideterminantal basis for such calculations relies heavily on certain properties of Abelian groups; in particular the M _L quantum number commonly employed in atomic structure calculations is replaced in the general molecular case by the index p which labels irreducible representations of some appropriate Abelian group. Formation of the desired symmetrized linear combinations of determinants is thereupon accomplished solely by means of a series of simple diagonalizations, a procedure which insures both the linear independence and the orthonormality of the resultant basis set. CI treatments involving the C₄H₄ isomer tetrahedrane (T _d point group) and the linear nitrous oxide NNO molecule are considered in some detail with a view toward illustrating the use of the techniques described herein. Finally, a survey of a series of recent calculations utilizing the CI method is made and it is concluded from these results that the effects of such treatment vary strongly from one system to another, depending in a very specific manner upon the individual characteristics of a given molecule.     

Stereochemistry of Polynuclear Cadmium(II)thioglycolates: Crystal Structure of [ICd8(SCH2CH2OH)12]3+ · 3I− · H2O

Crystals of the title compound are triclinic, a = 27.87 Å, b = 10.77 Å, c = 12.94 Å, α 73.1°, β 116.1°, γ 120.0°, space group P1 . The structure consists of octanuclear ions: Eight Cd(II) ions are found at the corners of a distorted cube, the center of the cube is occupied by an iodide, the twelve thioglycolate sulfur atoms bridge the twelve edges of the cube thereby forming a distorted icosahedron. Cadmium ions are either five or seven coordinate. The phase problem for this structure was solved using a combination of very high and very low E-values.     

Chemical Synthesis of Oligonucleotides Containing N6-Methyladenine Residues in the GATC Site

To investigate by NMR the effects of adenine methylation, a set of oligodeoxynucleotides has been synthesized by phosphotriester or phosphoramidite procedures on silica-gel support. The preparation of fully protected 2′-deoxy-N⁶-methyladenosine 3′-phosphate 4 and (2′-deoxy-N⁶-methyladenosin-3′-O-yl)(methoxy)morpholinophosphine 5 is described. The large-scale chemical synthesis, purification by HPLC, and characterization by MS of these molecules containing N⁶-methyladenine is reported.     

Stoichiometric and catalytic deuterium and tritium labeling of "unactivated" organic substrates with cationic Ir(III) complexes

[reaction: see text] Ir(III) complex [Cp(PMe(3))IrMe(CH(2)Cl(2))][BAr(f)] (1) was used to introduce deuterium stoichiometrically into substituted naphthalene/benzene templates and several "drug-like" entities. The exchange process is tolerant of a wide array of functional groups. Labeling of warfarin using subatmospheric pressures of T(2) led to specific activities and total activities rivaling current functional group directed tritium labeling methods. When paired with the appropriate deuterium donor, Cp(PMe(3))Ir(H(3))OTf (4) was found to deuterate a number of organic compounds catalytically.     

Zinc solid-state NMR spectroscopy of human carbonic anhydrase: implications for the enzymatic mechanism

The pH dependence of the (67)Zn solid-state nuclear magnetic resonance spectroscopy of human carbonic anhydrase (CAII) has been investigated to characterize the nature of the fourth ligand. CAII, through the Zn(2+)-bound hydroxide, catalyzes the deceptively simple reaction: CO(2) + H(2)O <==> HCO(3)(-) + H(+). The accepted mechanism for CAII would predict that water would be bound to the Zn(2+) at pH 5 and hydroxide would be bound at pH 8.5. The measured values for the electric field gradient (EFG) or quadrupole coupling constant (Cq) for CAII are independent of pH within the limits of the experimental error, i.e., 9.8 +/- 0.2 MHz. The EFG interaction has been predicted by ab initio electronic structure calculations for water and hydroxide bound to the zinc, including various levels of hydrogen bonding. After comparing the predicted Cq's with the experimental values, we conclude that the species present from pH 5-8.5 is the hydroxide form. The NMR data presented here is not consistent with the accepted mechanism for CAII. We show that the NMR data is consistent with an alternative mechanism of CAII.     

Polymerization and characterization of nitrile-terminated diacetylene materials

A family of nitrile-terminated diacetylene materials were synthesized. Samples were prepared in various forms and polymerization was performed photochemically and thermally. The resulting materials exhibited low molecular weights and were obtained in low yields. Although the diacetylene group had oligomerized, no evidence was found in support of ? C?N? chain formation. Thermochromism was exhibited by the irradiated 8-nitrile sample and a molecular interpretation of this chromic transition was discussed. Diffraction data implied that strong intermolecular interactions were present between adjacent nitrile groups in the low temperature phase. It is suggested that stresses are built up during polymerization which cause the low degree of polymerization and yield.