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81.
Eker F Cao X Nafie L Schweitzer-Stenner R 《Journal of the American Chemical Society》2002,124(48):14330-14341
We have measured the band profile of amide I in the infrared, isotropic, and anisotropic Raman spectra of L-alanyl-D-alanyl-L-alanine, acetyl-L-alanyl-L-alanine, L-vanyl-L-vanyl-L-valine, L-seryl-L-seryl-L-serine, and L-lysyl-L-lysyl-L-lysine at acid, neutral, and alkaline pD. The respective intensity ratios of the two amide I bands depend on the excitonic coupling between the amide I modes of the peptide group. These intensity ratios were obtained from a self-consistent spectral decomposition and then were used to determine the dihedral angles between the two peptide groups by means of a recently developed algorithm (Schweitzer-Stenner, R. Biophys. J. 2002, 83, 523-532). The validity of the obtained structures were checked by measuring and analyzing the vibrational circular dichroism of the two amide I bands. Thus, we found two solutions for all protonation states of trialanine. Assuming a single conformer, one obtains a very extended beta-helix-like structure. Alternatively, the data can be explained by the coexistence of a 3(1)(PII) and a beta-sheet-like structure. Acetyl-L-alanyl-L-alanine exhibits a structure which is very similar to that obtained for trialanine. The tripeptide with the central D-alanine adopts an extended structure with a negative psi and a positive phi angle. Trivaline and triserine adopt single beta(2)-like structures such as that identified in the energy landscape of the alanine dipeptide. Trilysine appears different from the other investigated homopeptides in that it adopts a left-handed helix which at acid pD is in part stabilized by hydrogen bonding between the protonated carboxylate (donor) and the N-terminal peptide carbonyl. Our result provides compelling evidence for the capability of short peptides to adopt stable structures in an aqueous solution, which at least to some extent reflect the intrinsic structural propensity of the respective amino acids in proteins. Furthermore, this paper convincingly demonstrates that the combination of different vibrational spectroscopies provides a powerful tool for the determination of the secondary structure of peptides in solution. 相似文献
82.
Ronald Hesse Carsten Bundesmann Reinhard Denecke 《Surface and interface analysis : SIA》2019,51(13):1342-1350
The improvement of the software UNIFIT 2020 from an analysis processing software for photoelectron spectroscopy (XPS) only to a powerful tool for XPS, Auger electron spectroscopy (AES), X-ray absorption spectroscopy (XAS), and Raman spectroscopy requires new additional programme routines. Particularly, the implementation of the analysis of Raman spectra needs a well-working automatic spike correction. The application of the modified discrete Laplace operator method allows for a perfect localization and correction of the spikes and finally a successful peak fit of the spectra. The theoretical basis is described. Test spectra allow for the evaluation of the presented method. A comparison of the original and spike-corrected real measurements demonstrates the high quality of the method used. 相似文献
83.
The effect of surfactants on surface instabilities of thin liquid film flow on a rotating disk was studied at different flow rates Q (0.5相似文献
84.
Product distribution of peroxynitrite decay as a function of pH, temperature, and concentration. 总被引:2,自引:0,他引:2
The decay of peroxynitrite [O=NOO(-), oxoperoxonitrate(1-)] was examined as a function of concentration (0.050-2.5 mM), temperature (5-45 degrees C), and pH (2.2-10.0). Below 5 degrees C and pH 7, little amounts of the decomposition products nitrite and dioxygen are formed, even when the peroxynitrite concentration is high (2.5 mM). Instead, approximately > or =90% isomerizes to nitrate. At higher pH, decomposition increases at the expense of isomerization, up to nearly 80% at pH 10.0 at 5 degrees C and 90% at 45 degrees C. Much less nitrite and dioxygen per peroxynitrite are formed when the peroxynitrite concentration is lower; at 50 microM and pH 10.2, < or =40% decomposes. In contrast to two other reports (Pfeiffer, S.; Gorren, A. C. F.; Schmidt, K.; Werner, E. R.; Hansert, B.; Bohle, D. S.; Mayer, B. J. Biol. Chem. 1997, 272, 3465-3470, and Coddington, J. W.; Hurst, J. K.; Lymar, S. V. J. Am. Chem. Soc. 1999, 121, 2438-2443), we find that the extent of decomposition is dependent on the peroxynitrite concentration. 相似文献
85.
Galina Strand Reinhard Renneberg Frieder Scheller 《Journal of Electroanalytical Chemistry》1985,194(1):123-130
The enzyme α-amylase splits blue starch in fragments bearing electroactive groups which exhibit two waves in the pulse polarograms. This behaviour is the basis of the polagraphic determination of bacterial and human serum α-amylase activity. The differential pulse mode is more sensitive by a factor of 25 as compared with normal pulse polarography. With serum α-amylase, protein adsorption disturbs the determination of low activities. 相似文献
86.
87.
Dr. Nadja A. Simeth Thomas Kinateder Dr. Chitra Rajendran Julian Nazet Prof. Dr. Rainer Merkl Prof. Dr. Reinhard Sterner Prof. Dr. Burkhard König Dr. Andrea C. Kneuttinger 《Chemistry (Weinheim an der Bergstrasse, Germany)》2021,27(7):2439-2451
Light regulation of drug molecules has gained growing interest in biochemical and pharmacological research in recent years. In addition, a serious need for novel molecular targets of antibiotics has emerged presently. Herein, the development of a photocontrollable, azobenzene-based antibiotic precursor towards tryptophan synthase (TS), an essential metabolic multienzyme complex in bacteria, is presented. The compound exhibited moderately strong inhibition of TS in its E configuration and five times lower inhibition strength in its Z configuration. A combination of biochemical, crystallographic, and computational analyses was used to characterize the inhibition mode of this compound. Remarkably, binding of the inhibitor to a hitherto-unconsidered cavity results in an unproductive conformation of TS leading to noncompetitive inhibition of tryptophan production. In conclusion, we created a promising lead compound for combatting bacterial diseases, which targets an essential metabolic enzyme, and whose inhibition strength can be controlled with light. 相似文献
88.
89.
Biance AL Calbry-Muzyka A Höhler R Cohen-Addad S 《Langmuir : the ACS journal of surfaces and colloids》2012,28(1):111-117
We study how shearing clusters of two or four bubbles induces bubble separation or topological rearrangement. The critical deformation at which this yielding occurs is measured as a function of shear rate, liquid composition, and liquid content in the cluster. We establish a geometrical yield criterion in the quasistatic case on the basis of these experimental data as well as simulations. In the dynamic regime, the deformation where the cluster yields increases with the strain rate, and we derive a scaling law describing this phenomenon based on the dynamical inertial rupture of the liquid meniscus linking the two bubbles. Our experiments show that the same scaling law applies to two- and four-bubble clusters. 相似文献
90.
Christine Bauhofer Hansjürgen Mattausch Reinhard K. Kremer Arndt Simon 《无机化学与普通化学杂志》1995,621(9):1501-1507
The Gadolinium Carbide Halides, Gd4C2X3 (X = Cl, Br) The compounds Gd4C2X3 (X = Cl, Br) and Tb4C2Br3 have been prepared by reaction of the metals (RE), REX3, and C in sealed Ta capsules at 1 100° and 1 300°C, respectively. Monophasic samples of Gd4C2Br3 and Tb4C2Br3 were obtained by reacting stoichiometric mixtures of the starting materials for five days. The needle shaped crystals are bronze-coloured and sensitive to air and moisture. Gd4C2X3 crystallizes in the space group Pnma (No. 62) with lattice constants a = 1 059.6(4), b = 368.4(1), c = 1 962.7(8) pm (Gd4C2Cl3), a = 1 084.4(1), b = 373.0(1), c = 2 036.1(1) pm (Gd4C2Br3). According to Guinier photographs, Tb4C2Br3 is isotypic (a = 1 074.3(2), b = 370.6(1), c = 2 019.4(1) pm). In the crystal structure C is octahedrally coordinated by Gd. The Gd6 octahedra are linked via common edges to form corrugated layers. The X-anions coordinate all free edges and corners of these layers and connect them via Xi? Xi contacts parallel [001]. Gd4C2Br3 shows metallic conductivity. The magnetic susceptibility follows at high temperatures a Curie Weiss law with an effective moment of 7.95 μB. At temperatures below 50 K antiferromagnetic order is observed. 相似文献