Ionic Association and Mobility IV. Ionophores in Dimethylsulfoxide at 25°C

The results of conductance measurements on pyridinium picrate, tetraphenylo-sonium picrate, potassium picrate, tetraphenylantimony picrate, tetrapropylam-monium, tetrafluoroborate, tetramethylammonium hexafluorophosphate ion association noncoulombic interaction in dimethyl sulfoxide (DMSO) at 25°C in the concentration range 1–15×10^–4 M are reported. The data were analyzed by the Justice modification of the Fuoss–Hsia equation. Except for pyridinium picrate all salts studied were found to be associated.Application of the Justice Barthel–Bjerrum model of ion association permitted calculation of the noncoulombic portion of the potential of mean force, W _±. Ionic limiting conductances were calculated for six ions using known values of previously determined transport numbers. A table of most current limiting ionic conductances for a variety of ions in DMSO at 25°C has been established.     

Syntheses and Structural Aspects of Cyclodextrin/Dialkylamine Inclusion Compounds

We report the syntheses and structural aspects of cyclodextrin host–guest inclusion compounds containing linear secondary alkylamines (dipropyl, dibutyl, dipentyl, dihexyl, and dioctyl) at 25 °C. Elemental analysis, ¹³C CP-MAS NMR spectroscopy, and powder X-ray diffraction analysis confirm the inclusion process. The basic host structure of the products is similar to that of typical cyclodextrin inclusion systems. ¹³C MAS NMR experiments show a different resonance pattern for the confined guest molecules with respect to the amine in the liquid phase. The presence of different resonance signals for the homologous carbon atoms of both dialkylamine branches is evidence for the non-symmetric location of the amine in the cyclodextrin channels.     

Determination of phosphorus in steels by radiochemical neutron activation analysis

The viability of radiochemical neutron activation analysis as a method for certification of phosphorus in steels was tested by analysis of SRM low alloy steels. Preliminary results are generally in agreement with certified values. The limit of detection, as defined by Currie¹, was determined to be 5 μg/kg.     

Ageing of surface treated thermoplastic polyolefins

Thermoplastic polyolefin panels were treated with a flame, flame & water, and accelerated thermo molecular adhesion process (ATmaP) treatment. XPS, contact angle and adhesion test (pull off) results were acquired over a one year period to determine the changes in the elemental composition, surface energy and adhesion strength respectively over time. All surface-treated thermoplastic polyolefin samples showed a sharp decline in adhesion strength up to an ageing period totalling 6 months. The decline in adhesion strength was correlated with a decline in the nitrogen-containing constituents and C–O functional groups at the surface and a decline in surface energy for the flame & water-treated sample. There was no significant change in adhesion strength for all samples for ageing periods greater than 6 months. ATmaP-treated thermoplastic polyolefin outperformed the other two surface treatments in adhesion strength tests due to ATmaP retaining nitrogen-based functional groups (mainly nitrogen oxides) over the year long study. This retention of functionality allowed for a slower ageing process for ATmaP-treated surfaces in comparison to the other surface treatments.     

Perylene-based profluorescent nitroxides for the rapid monitoring of polyester degradation upon weathering: An assessment

A profluorescent nitroxide possessing an isoindoline nitroxide moiety linked to a perylene fluorophore was developed to monitor radical mediated degradation of melamine-formaldehyde crosslinked polyester coil coatings in an industry standard accelerated weathering tester. Trapping of polyester-derived radicals (most likely C-radicals) that are generated during polymer degradation leads to fluorescent closed-shell alkoxy amines, which was used to obtain time-dependent degradation profiles to assess the relative stability of different polyesters towards weathering. The nitroxide probe couples excellent thermal stability and satisfactory photostability with high sensitivity and enables detection of free radical damage in polyesters under conditions that mimic exposure to the environment on a time scale of hours rather than months or years required by other testing methods. There are indications that the profluorescent nitroxide undergoes partial photo-degradation in the absence of polymer-derived radicals. Unexpectedly, it was also found that UV-induced fragmentation of the NO–C bond in closed-shell alkoxy amines leads to regeneration of the profluorescent nitroxide and the respective C-radical. The maximum fluorescence intensity that could be achieved with a given probe concentration is therefore not only determined by the amount of polyester radicals formed during accelerated weathering, but also by the light-driven side reactions of the profluorescent nitroxide and the corresponding alkoxy amine radical trapping products. Studies to determine the optimum probe concentration in the polymer matrix revealed that aggregation and re-absorption effects lowered the fluorescence intensity at higher concentrations of the profluorescent nitroxide, but too low probe concentrations, where these effects would be avoided, were not sufficient to trap the amount of polyester radicals formed upon weathering. The optimized experimental conditions were used to assess the impact of temperature and UV irradiance on polymer degradation during accelerated weathering.     

Rationalizing the generation of broad spectrum antibiotics with the addition of a positive charge

Antibiotic resistance of Gram-negative bacteria is largely attributed to the low permeability of their outer membrane (OM). Recently, we disclosed the eNTRy rules, a key lesson of which is that the introduction of a primary amine enhances OM permeation in certain contexts. To understand the molecular basis for this finding, we perform an extensive set of molecular dynamics (MD) simulations and free energy calculations comparing the permeation of aminated and amine-free antibiotic derivatives through the most abundant OM porin of E. coli, OmpF. To improve sampling of conformationally flexible drugs in MD simulations, we developed a novel, Monte Carlo and graph theory based algorithm to probe more efficiently the rotational and translational degrees of freedom visited during the permeation of the antibiotic molecule through OmpF. The resulting pathways were then used for free-energy calculations, revealing a lower barrier against the permeation of the aminated compound, substantiating its greater OM permeability. Further analysis revealed that the amine facilitates permeation by enabling the antibiotic to align its dipole to the luminal electric field of the porin and form favorable electrostatic interactions with specific, highly-conserved charged residues. The importance of these interactions in permeation was further validated with experimental mutagenesis and whole cell accumulation assays. Overall, this study provides insights on the importance of the primary amine for antibiotic permeation into Gram-negative pathogens that could help the design of future antibiotics. We also offer a new computational approach for calculating free-energy of processes where relevant molecular conformations cannot be efficiently captured.

A rapid pathway sampling method combining Monte Carlo and graph theory, developed to describe permeation pathways through outer membrane porins, can distinguish between structurally similar analogs with different permeabilities.     

Stereochemistry and bonding in N-substituted-2-phenyl-3-cyanoaziridines

A series of ten N-alkyl(aralkyl)-2-phenyl-3-cyanoaziridines has been synthesized to continue investigations of the molecular stereochemistry and bonding of functionalized aziridines. Substantial spectroscopic evidence is presented which indicates the presence of stereoselective hyperconjugation between the phenyl and nitrile groups and the aziridine ring. The ¹H and ¹³C nmr chemical shifts are rationalized in terms of the interactions of the substituents on the aziridine ring, and how these interactions vary with the steric bulk of the nitrogen substituents. Various stereoselective coupling constants (¹H-¹H and ¹³C-¹H) are also reported.     

On the mechanism of THF catalyzed vinylic lithiation of allylamine derivatives: structural studies using 2-D and diffusion-ordered NMR spectroscopy

N-Lithio-N-(trialkylsilyl)allylamines can be deprotonated in the presence of ethereal solvents exclusively at the cis-vinylic position to yield 3,N-dilithio-N-(trialkylsilyl)allylamines under mild conditions. Low temperature (1)H and (7)Li NMR ((1)H NOESY, TOCSY, (1)H/(7)Li HSQC, and DO-NMR) studies on the solution structure of 3,N-dilithio-N-(tert-butyldimethylsilyl)allylamine identified three major aggregates in THF (monomer, dimer and tetramer), but the aggregate structures failed to explain the solvent dependence and regiochemical outcome of the reaction. Low temperature (1)H NMR (NOESY, TOCSY, DO-NMR) studies on the solution structure of N-lithio-N-(tert-butyldimethylsilyl)allylamine in the presence of nBuLi identified amide/nBuLi mixed aggregates in both the ethereal solvent THF (1:1 dimer) and the hydrocarbon solvent toluene (1:3 tetramer). Addition of 2 equiv of THF to toluene solutions induces the formation of the same THF solvated 1:1 dimer as observed in neat THF. NMR evidence suggests that in THF the mixed aggregate has close contact between the olefin and the beta-CH(2) of nBuLi, while in the absence of THF, the allyl chain appears to be pointed away from the nearest nBuLi residues.     

Oligoporphyrin Arrays Conjugated to [60]Fullerene: Preparation,NMR Analysis,and Photophysical and Electrochemical Properties

We report the synthesis and physical properties of novel fullerene–oligoporphyrin dyads. In these systems, the C‐spheres are singly linked to the terminal tetrapyrrolic macrocycles of rod‐like meso,meso‐linked or triply‐linked oligoporphyrin arrays. Monofullerene–mono(Zn^II porphyrin) conjugate 3 was synthesized to establish a general protocol for the preparation of the target molecules (Scheme 1). The synthesis of the meso,meso‐linked oligopophyrin–bisfullerene conjugates 4 – 6 , extending in size up to 4.1 nm ( 6 ), was accomplished by functionalization (iodination followed by Suzuki cross‐coupling) of the two free meso‐positions in oligomers 21 – 23 (Schemes 2 and 3). The attractive interactions between a fullerene and a Zn^II porphyrin chromophore in these dyads was quantified as ΔG=−3.3 kcal mol⁻¹ by variable‐temperature (VT) ¹H‐NMR spectroscopy (Table 1). As a result of this interaction, the C‐spheres adopt a close tangential orientation relative to the plane of the adjacent porphyrin nucleus, as was unambiguously established by ¹H‐ and ¹³C‐NMR (Figs. 9 and 10), and UV/VIS spectroscopy (Figs. 13–15). The synthesis of triply‐linked diporphyrin–bis[60]fullerene conjugate 8 was accomplished by Bingel cyclopropanation of bis‐malonate 45 with two C₆₀ molecules (Scheme 5). Contrary to the meso,meso‐linked systems 4 – 6 , only a weak chromophoric interaction was observed for 8 by UV/VIS spectroscopy (Fig. 16 and Table 2), and the ¹H‐NMR spectra did not provide any evidence for distinct orientational preferences of the C‐spheres. Comprehensive steady‐state and time‐resolved UV/VIS absorption and emission studies demonstrated that the photophysical properties of 8 differ completely from those of 4 – 6 and the many other known porphyrin–fullerene dyads: photoexcitation of the methano[60]fullerene moieties results in quantitative sensitization of the lowest singlet level of the porphyrin tape, which is low‐lying and very short lived. The meso,meso‐linked oligoporphyrins exhibit ¹O₂ sensitization capability, whereas the triply‐fused systems are unable to sensitize the formation of ¹O₂ because of the low energy content of their lowest excited states (Fig. 18). Electrochemical investigations (Table 3, and Figs. 19 and 20) revealed that all oligoporphyrin arrays, with or without appended methano[60]fullerene moieties, have an exceptional multicharge storage capacity due to the large number of electrons that can be reversibly exchanged. Some of the Zn^II porphyrins prepared in this study form infinite, one‐dimensional supramolecular networks in the solid state, in which the macrocycles interact with each other either through H‐bonding or metal ion coordination (Figs. 6 and 7).