Elucidation of the Active Conformation of Vancomycin Dimers with Antibacterial Activity against Vancomycin‐Resistant Bacteria

Covalently linked vancomycin dimers have attracted a great deal of attention among researchers because of their enhanced antibacterial activity against vancomycin‐resistant strains. However, the lack of a clear insight into the mechanisms of action of these dimers hampers rational optimization of their antibacterial potency. Here, we describe the synthesis and antibacterial activity of novel vancomycin dimers with a constrained molecular conformation achieved by two tethers between vancomycin units. Conformational restriction is a useful strategy for studying the relationship between the molecular topology and biological activity of compounds. In this study, two vancomycin units were linked at three distinct positions of the glycopeptide (vancosamine residue (V), C terminus (C), and N terminus (N)) to form two types of novel vancomycin cyclic dimers. Active NC‐VV‐linked dimers with a stable conformation as indicated by molecular mechanics calculations selectively suppressed the peptidoglycan polymerization reaction of vancomycin‐resistant Staphylococcus aureus in vitro. In addition, double‐disk diffusion tests indicated that the antibacterial activity of these dimers against vancomycin‐resistant enterococci might arise from the inhibition of enzymes responsible for peptidoglycan polymerization. These findings provide a new insight into the biological targets of vancomycin dimers and the conformational requirements for efficient antibacterial activity against vancomycin‐resistant strains.     

Intermolecular Halogen Bond Detected in Racemic and Optically Pure N-C Axially Chiral 3-(2-Halophenyl)quinazoline-4-thione Derivatives

The halogen bond has been widely used as an important supramolecular tool in various research areas. However, there are relatively few studies on halogen bonding related to molecular chirality. 3-(2-Halophenyl)quinazoline-4-thione derivatives have stable atropisomeric structures due to the rotational restriction around an N-C single bond. In X-ray single crystal structures of the racemic and optically pure N-C axially chiral quinazoline-4-thiones, we found that different types of intermolecular halogen bonds (C=S⋯X) are formed. That is, in the racemic crystals, the intermolecular halogen bond between the ortho-halogen atom and sulfur atom was found to be oriented in a periplanar conformation toward the thiocarbonyl plane, leading to a syndiotactic zig-zag array. On the other hand, the halogen bond in the enantiomerically pure crystals was oriented orthogonally toward the thiocarbonyl plane, resulting in the formation of a homochiral dimer. These results indicate that the corresponding racemic and optically pure forms in chiral molecules are expected to display different halogen bonding properties, respectively, and should be separately studied as different chemical entities.     

Completely stereocontrolled synthesis of the right fragment of salinomycin,a polyether antibiotic,by means of the chelation-controlled grignard reaction

In the course of our synthetic study of salinomycin ($\text{1}$), an ionophorous polyether antibiotic, the γ-lactone ($\text{2}$) corresponding to the C-21～C-30 fragment (the right fragment) of $\text{1}$ was synthesized from D-mannitol and ethyl L-lactate as chiral starting materials. The complete stereocontrol for the construction of new chiral centers has been achieved by means of the chelation-controlled Grignard reaction and the tetrahydropyran synthesis via the acid catalyzed epoxide ring opening.     

2′,4′-BNA/LNA with 9-(2-Aminoethoxy)-1,3-diaza-2-oxophenoxazine Efficiently Forms Duplexes and Has Enhanced Enzymatic Resistance**

Artificial nucleic acids are widely used in various technologies, such as nucleic acid therapeutics and DNA nanotechnologies requiring excellent duplex-forming abilities and enhanced nuclease resistance. 2′-O,4′-C-Methylene-bridged nucleic acid/locked nucleic acid (2′,4′-BNA/LNA) with 1,3-diaza-2-oxophenoxazine (BNAP ( B^H )) was previously reported. Herein, a novel B^H analogue, 2′,4′-BNA/LNA with 9-(2-aminoethoxy)-1,3-diaza-2-oxophenoxazine (G-clamp), named BNAP-AEO ( B^AEO ), was designed. The B^AEO nucleoside was successfully synthesized and incorporated into oligodeoxynucleotides (ODNs). ODNs containing B^AEO possessed up to 10⁴-, 152-, and 11-fold higher binding affinities for complementary (c) RNA than those of ODNs containing 2′-deoxycytidine ( C ), 2′,4′-BNA/LNA with 5-methylcytosine ( L ), or 2′-deoxyribonucleoside with G-clamp ( P^AEO ), respectively. Moreover, duplexes formed by ODN bearing B^AEO with cDNA and cRNA were thermally stable, even under molecular crowding conditions induced by the addition of polyethylene glycol. Furthermore, ODN bearing B^AEO was more resistant to 3′-exonuclease than ODNs with phosphorothioate linkages.     

The reactions of the Criegee intermediate CH3 CHOO in the gas-phase ozonolysis of 2-butene isomers

Ozonolysis of cis- and trans-2-butene isomers were carried out in a 570 l spherical glass vessel in 730 torr synthetic air at 295 ± 3 K. The initial concentrations were 5 to 10 ppmv for the isomers and 2 to 5 ppmv for ozone. Quantitative yields were determined by FTIR spectroscopy for CH₃CHO, HCHO, CH₄, CH₃OH, CO, and CO₂. By means of computational subtraction of the spectral contribution of the identified products from the product spectra, residual spectra have been obtained. Formation of 2-butene ozonide, propene ozonide, and l-hydroperoxyethyl formate CH₃CH(OOH)(SINGLE BOND)O(SINGLE BOND)CH(O) have been identified in the residual spectra. These products have been shown to be formed in the reactions of the Criegee intermediate CH₃CHOO with CH₃CHO, HCHO, and HCOOH, respectively. Mechanistic implications and atmospheric relevance of these observations are discussed. © 1997 John Wiley & Sons, Inc. Int J Chem Kinet 29: 461–468, 1997.     

Mass spectrometric investigation of the aggregation and coalescence of fullerenes in C60-modified poly(N-vinylcarbazole) by UV-laser ablation

The phenomena of aggregation and coalescence of fullerenes in the UV-laser ablation time-of-flight mass spectrometric investigation of C₆₀-modified poly(N-vinylcarbazole) both in the positive and in the negative ion channels have been observed. The results indicate that in C₆₀ chemically modified PVK (C₆₀–PVK) copolymer the nascent fullerene fragments ruptured from main chain can easily coalesce into large fullerenes through collisions, whereas in the C₆₀-doped PVK the aggregation and coalescence of C₆₀ were relative weak due to nonbounding action and incomplete charge transfer behavior between C₆₀ and PVK. Furthermore, the photoinduced electron transfer behavior between C₆₀ and carbazole units in the C₆₀ chemically modified poly(N-vinylcarbazole) in benzonitrile by laser flash photolysis at 355 nm has also been investigated. Efficiency of the anion radical of C₆₀ in copolymer at 1080 nm is higher than that of the C₆₀-doped poly(N-vinylcarbazole) polymers. The formation of a C₆₀ radical anion may be ascribed to photoinduced electron transfer between C₆₀ pendanted on the main chain backbone and the inter-, and intrachain carbazole units in the copolymer. © 1997 John Wiley & Sons, Inc. 35 : 1185–1190, 1997     

Chirality induction in cyclopolymerization. VI. Enantioselective cationic cyclopolymerization of divinyl ethers with chiral 10-camphorsulfonic acid/zinc chloride initiating system

Cyclopolymerization of benzaldehyde divinyl acetal ( 1 ) and 1,2-divinyloxybenzene ( 4 ) was carried out using (+)- or (−)-camphorsulfonic acid [(+)- or (−)- 2 ]/ZnCl₂ initiating system. Polymer 3 obtained from monomer 1 consisted essentially of cyclic repeating units, whereas polymer 5 from 4 possessed a small amount of residual vinyloxy groups. Both polymers 3 and 5 using (+)- 2 /ZnCl₂ showed optical activity with a negative sign of optical rotation. The molar optical rotation values of polymer 3 using ZnCl₂ · OEt₂ were larger than those using ZnCl₂. The CD spectra of the polymer with [Φ] = −30.1° ((−)- 3 ) and (4S,6S)-4,6-dimethyl-2-phenyl-1,3-dioxane showed a negative Cotton effect at 210 nm, whereas the polymer with [Φ] = +24.1° ((+)- 3 ) and (4R,6R)-4,6-dimethyl-2-phenyl-1,3-dioxane had mirror image CD curves with a positive Cotton effect at 210 nm. The absolute configurations of the major chiral cyclic units in (−)- and (+)- 3 were the SS- and RR-forms, respectively. © 1997 John Wiley & Sons, Inc.     

A new synthetic pathway of segmented tri-block copolyether

A new synthetic pathway of A–B–A tri-block copolyether which is composed of a hydrophilic poly(oxyethylene) unit as an A part and a hydrophobic poly(oxy-2-methyl-trimethylene) unit as a B part is proposed. Telechelic α-tosyl-ω-tosyloxypoly(oxy-2-methyl-trimethylene) derived from tosylation of poly(oxy-2-methyl-trimethylene glycol) (PMTG) was allowed to react with poly(ethylene glycol) (PEG) in the presence of sodium hydroxide. T_g of the resulting A–B–A tri-block copolyether (PEMG) (M?_n = 1600) was ?72°C and its specific gravity [D₄¹⁵] was 1.055.     

The effect of the counteranion on the formation of mesoporous materials under the acidic synthesis process

The presence of various counteranions at the interfacial region of the silicate-surfactant mesophase introduces opportunities for manipulation of the phase structure. Well-ordered 3D-hexagonal P63/mmc, cubic Pmn, 2D-hexagonal p6mm, and cubic Iad mesoporous materials have been synthesized with the same surfactant, cetyltriethylammonium bromide, in the presence of various acids. The counteranions of acidic media have resulted in increasing the surfactant packing parameter g in the order SO42- < Cl- < Br- < NO3-, which leads to the different time course of formation of mesostructures. The effect of counteranions on the formation of mesostructures is explained in terms of not only the adsorption strength on the headgroups of the surfactant micelle but also the rate of silica condensation affecting the charge density matching between the surfactant and silica. It has been found that the mesophase is always transformed from the larger g parameter into the smaller one. The distinct morphologies of the 3D-hexagonal P63/mmc mesophases have been rationally explained by supposing this particular mesostructure. The cubic Iad phase has been first synthesized under acidic conditions.     

Convenient synthesis of 3,3,3-trifluoropropenyl compounds from aromatic aldehydes by means of the TBAF-mediated Horner reaction

A simple synthesis of 3,3,3-trifluoropropenyl compounds by means of the TBAF-mediated Horner reaction is described. The reagent, 2,2,2-trifluoroethyldiphenylphosphine oxide, was readily prepared either by Arbuzov reaction of ethyl diphenylphosphinite with 2,2,2-trifluoroethyl iodide or by treating chlorodiphenylphosphine with trifluoroacetic acid and water. Treatment of the phosphine oxide with aromatic aldehydes in the presence of TBAF at room temperature afforded the corresponding 3,3,3-trifluoropropenyl compounds in good yields. The present method is very convenient for preparing 3,3,3-trifluoropropenyl compounds from aromatic aldehydes in terms of availability of the reagent, operational simplicity, and good yields of the products.