Electron impact induced fragmentation of dihydro-1,4-oxathiines. 1. 2,3-substituted 5,6-dihydro-1,4-oxathiines

In the electron impact induced fragmentation of 2,3-disubstituted 5,6-dihydro-1,4-oxathiines, the cleavage of the heterocyclic ring proceeds through the retro Diels-Alder type of reaction. The further fragmentation of the resulting radical cation gives rise to substituted carbonyl or thiocarbonyl cations. This fragmentation favours the formation of an ion which, in the electron-deficient carbon-oxygen or carbon-sulphur triple bond, is stabilized by an electron-releasing group. The ring fragmentation was observed to be dependent on the nature of the 3-substituent of the ring when a series of 3-substituted 5,6-dihydro-2-methyl-1,4-oxathiines was investigated.     

Quantum chemical modeling of chiral catalysis. Part 8. On the conformational freedom of the ketone of ketone-borane complexes of oxazaborolidines used as catalysts in the enantioselective reduction of ketones

Standard ab initio molecular orbital methods were employed to study conformational freedom of the ketone of ketone-borane complexes of chiral oxazaborolidines used as catalysts for the enantioselective reduction of ketones (CBS reduction). A formaldehyde-borane complex of 1,3,2-oxazaborolidine was used as a model system. A new conformation was found which was energetically more advantageous than the original one predicted by Corey et al. The new conformation was predicted to be destabilized by bulky substituents at the C-5 of the ring. A new class of potential oxazaborolidine catalysts for the enantioselective reduction of ketones was invented.     

Quantum mechanical investigation of effects in formation of carbonyl and thiocarbonyl cations. Part I. Fragmentation reactions of 1,2-hemithiodione radical cations

In order to study decomposition reactions of ionic oxygen and sulphur-containing compounds, such as hemithiodione radical cations, a quantum chemical investigation of the formation of formyl, thioformyl, acyl and thioacyl cations and radicals was performed. Calculations were carried out mainly at the 6–31G^* level involving complete geometry optimizations. In the ionization of aldehydes and thioaldehydes, no important energy differences were found between the oxygen and sulphur analogues studied. A stepwise generation of formyl and thioformyl cations from formaldehyde and thioformaldehyde, by hydrogen atom abstraction followed by expulsion of unpaired electrons from the resulting radicals, showed the radicalization of formaldehyde to be only 12.6 kJ mol^?1 more favoured than that of thioformaldehyde. The electron expulsion from formyl radical was 23.8 kJ mol^?1 more favoured than that from thioformyl radical. Substitution of hydrogens of formyl and thioformyl groups by methyls lowered the total formation energies of carbonyl and thiocarbonyl cations 119.2 and 96.2 kJ mol^?1. The formation energy difference between acyl and thioacyl cations was also very small.     

Sobolev Spaces with Zero Boundary Values on Metric Spaces

We generalize the definition of the first order Sobolev spaces with zero boundary values to an arbitrary metric space endowed with a Borel regular measure. We show that many classical results extend to the metric setting. These include completeness, lattice properties and removable sets.     

Color Tunability and Electrochemiluminescence of Silver Nanoclusters

Colorful clusters : Silver nanoclusters consisting of only a few atoms exhibit large chemical‐environment‐responsive shifts of their optical absorption and emission bands, that is, large solvatochromism (see picture). The photophysical characteristics and electrochemiluminescence of the Ag clusters give them remarkable advantages over larger nanoparticles in applications such as molecular sensing.

     

Improved 2-DE of microorganisms after acidic extraction

2-DE separations of protein extracts sometimes have problems with poor resolution and streaking. This problem is particularly apparent with microorganisms, most notably those with a large cell wall. Here we describe a novel, rapid protocol for the extraction of microorganisms in acidic conditions, leading to increased resolution and 2-D gel quality. The efficiency of the protocol is demonstrated with extracts of bacteria, Escherichia coli and Bacillus subtilis; fungus, Trichoderma harzianum and yeast, Saccharomyces cerevisiae. We also demonstrate using a membrane centrifugal filtration, that large acidic molecules in excess of 100 kDa, probably including cell wall material, are responsible for the separation difficulties. A range of acidic extraction conditions were investigated, and it was found that optimal extraction is achieved using an extraction solution acidified to pH 3 by 80 mM citric acid. These findings have significant implications for the proteomic study of many medically, agriculturally and environmentally significant microorganisms, as the cell walls of these organisms are often considerably more complex than many commonly studied laboratory strains.     

Electron ionization mass spectra of phosphorus-containing heterocycles. I. 1,4,4a,5,6,7,8,8a-octahydro-2H-3,1,2-benzoxazaphosphinine 2-oxides

The electron ionization mass spectra of 27 cis- and trans-annelated 1,4,4a,5,6,7,8,8a-octahydro-2H-3,1,2-benzoxazaphosphinine 2-oxides were recorded to clarify the effects of the ring heteroatom (O or N), ring annelation, the P configuration and the substituents attached to the ring or to the N and P atoms. For compounds 1-12 different alkyl radical and alkene losses and the cleavage of the P-heteroatom bonds, instead of the P-C bonds, were representative and dependent mainly on the substitution on the N and P atoms. The replacement of Ph and OPh by N(CH2CH2Cl)2 on the P atom had a dramatic influence on the fragmentation process: new fragment ions were obtained and very little M+ (1-3%) was formed. Only slight differences were found between some of the corresponding isomers, but interestingly the compounds formed clear groups on the basis of the differences in their fragmentation, depending on the ring-N and ring-P substituents.     

Coupled-cluster studies of the electronic excitation spectra of silanes

The electronic excitation spectra of unsubstituted linear silanes (n-Si(m)H(2m+2), m = 1-6), cyclopentasilane (c-Si5H10), and neopentasilane (neo-Si5H12) have been studied at the coupled-cluster approximate singles and doubles (CC2) level using Dunning's quadruple-zeta basis sets augmented with diffuse functions (aug-cc-pVQZ). Comparisons with measured ultraviolet spectra for Si2H6 and n-Si3H8 show that CC2 calculations using these basis sets yield excitation energies in good agreement with experiment. The calculated excitation thresholds for Si2H6 and n-Si3H8 of 7.61 and 6.68 eV are only 0.05 eV larger than the gas-phase values of 7.56 and 6.63 eV, respectively. For n-Si4H10, n-Si5H12, and neo-Si5H12, the calculated excitation thresholds of 6.51, 6.14, and 6.87 eV for the lowest dipole-allowed transitions are about 0.4 eV larger than the corresponding liquid-phase data of 6.05, 5.77, and 6.53 eV; the discrepancy can mainly be attributed to solvent effects. The obtained excitation thresholds for n-Si6H14 is 5.85 eV, whereas no experimental data are available for its optical gap. Calculations using the Karlsruhe triple-zeta valence basis sets augmented with single and double sets of polarization functions show that very large basis sets augmented with diffuse functions are needed for obtaining accurate excitation energies. The optical gaps for silanes obtained using the triple-zeta polarization basis sets were found to be 0.4 and 0.2 eV larger than those obtained using Dunning's quadruple-zeta basis sets. Excitation thresholds calculated at density functional theory levels using generalized gradient approximation are 0.7-1.0 eV smaller than the experimental values and by employing hybrid functionals they are 0.3-0.4 eV below the experimental thresholds. By adding the present basis-set correction and environmental effects to the previously calculated CC2 value for the excitation threshold of the Si29H36 silicon nanocluster, the extrapolated absorption threshold is 4.0 eV as compared to the recently reported experimental value of 3.7 eV.