Inhibition of the histone demethylase JMJD2E by 3-substituted pyridine 2,4-dicarboxylates

Based on structural analysis of the human 2-oxoglutarate (2OG) dependent JMJD2 histone N(ε)-methyl lysyl demethylase family, 3-substituted pyridine 2,4-dicarboxylic acids were identified as potential inhibitors with possible selectivity over other human 2OG oxygenases. Microwave-assisted palladium-catalysed cross coupling methodology was developed to install a diverse set of substituents on the sterically demanding C-3 position of a pyridine 2,4-dicarboxylate scaffold. The subsequently prepared di-acids were tested for in vitro inhibition of the histone demethylase JMJD2E and another human 2OG oxygenase, prolyl-hydroxylase domain isoform 2 (PHD2, EGLN1). A subset of substitution patterns yielded inhibitors with selectivity for JMJD2E over PHD2, demonstrating that structure-based inhibitor design can enable selective inhibition of histone demethylases over related human 2OG oxygenases.     

Luminescent infinite coordination polymer materials from metal-terpyridine ligation

A new class of infinite coordination polymers (CP) was synthesized using a tetrahedral tetrakis[4-(4'-phenyl-2,2':6',2'-terpyridine)phenyl]methane ligand as an organic node to direct the three-dimensional growth of the network and M(II) (M = Zn, Fe, Ni, and Ru) ions as inorganic linkers, an approach that is the opposite of the metal-as-a-node strategy used in the construction of metal-organic frameworks (MOFs). The unusual rod-like morphology of the resulting microporous materials can be tuned via solvents and reaction conditions. The covalent entrapment of a [Ru(tpy)(2)](2+) moiety in the skeleton of the 3D-network enables the Ru-CP to exhibit room-temperature luminescence.     

Small molecule antagonists in distinct binding modes inhibit drug-resistant mutant of smoothened

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Highlights? New small molecule antagonists of Smo with distinct binding modes discovered from high throughput screens ? ALLO-1 and ALLO-2 are potent against the drug-resistant mutant of Smo ? ALLO-1 is potent against oncogenic mutant of Smo (SmoM2)     

Multiresonant coherent multidimensional vibrational spectroscopy of aromatic systems: pyridine, a model system

Multiresonant four wave mixing has been used to measure the coherent multidimensional spectroscopy (CMDS) of representative aromatic ring modes using pyridine as a model system. This work identifies the cross-peaks that appear between several modes and measures their coherent and incoherent dynamics. The work also explores the consequences of using multiresonant CMDS for molecules with transition moments that are typical of most vibrational modes. Typically, CMDS experiments rely on using transitions with exceptionally large transition moments. To observe cross-peaks, the pyridine concentration was raised until absorption effects became very important. These effects interfere with the parametric CMDS coherence pathways, but they do not make important contributions to the nonparametric pathways.     

Enzyme-directed assembly and manipulation of organic nanomaterials

Enzymes are the prime protagonists in the chemistry of living organisms. As such, chemists and biologists have long been fascinated by the array of highly selective transformations possible under biological conditions that are facilitated by enzyme-catalyzed reactions. Moreover, enzymes are involved in replicating, repairing and transmitting information in a highly selective and organized fashion through detection and signal amplification cascades. Indeed, because of their selectivity and potential for use outside of biological systems, enzymes have found immense utility in various biochemical assays and are increasingly finding applications in the preparation of small molecules. By contrast, the use of enzymatic reactions to prepare and build supramolecular and nanoscale materials is relatively rare. In this article, we seek to highlight efforts over the past 10 years at taking advantage of enzymatic reactions to assemble and manipulate complex soft, organic materials on the nanoscale. It is tantalizing to think of these processes as mimics of natural systems where enzymes are used in the assembly and transformation of the most complex nanomaterials known, for example, virus capsid assemblies and the myriad array of nanoscale biomolecular machinery.     

Analyzing the calcination of sulfur-rich calcareous oil shales using FT-IR spectroscopy and applying curve-fitting technique

The thermal processes during progressive calcination of sulfur-rich calcareous oil shales were analyzed using FT-IR spectroscopy and applying curve-fitting technique. The spectroscopic analysis is advantageous in the analysis of amorphous and short-range ordered thermal phases lacking of XRD peaks. The raw calcareous oil shales are composed of organic matter, kaolinite, smectite, calcite, and apatite (francolite). The principal thermal phases are metakaolinite, meta-smectite, free lime, anhydrite, gehlenite, and ellestadite. The thermal reactions observed with increase temperatures includes decomposition of organic matter followed by release of sulfur gas; dehydroxylation of kaolinite; and smectite at 500–600 °C; and thermal transformation to metakaolinite and meta-smectite; decarbonation of microcrystalline calcite to free lime at 600 °C; reaction of the sulfur gas with the free lime; formation of anhydrite at 600 °C; reaction of apatite and formation of ellestadite at 800 °C; reaction of the metakaolinite; the meta-smectite with the free lime; formation of gehlenite at 900 °C. Owingto the sulfatization process, a great part of the sulfur content of the raw oil shales is retained in the calcined ashes and the release of sulfur gas to the atmosphere decreases. Thus, the combustion of calcareous oil shales for energy source has less pollution effect than that of the clayey oil shales. FT-IR spectroscopy and spectral analysis seems to be useful methods for phase analysis of oil shales in combustion industry.     

Electrochemical impedance study of GaAs surface charge modulation through the deprotonation of carboxylic acid monolayers

Modifications to the space charge region of p+ and p-GaAs due to surface charge modulation by the pH-induced deprotonation of bound carboxylic acid terminal monolayers were studied by electrochemical impedance spectroscopy and correlated to flat-band potential measurements from Mott-Schottky plots. We infer that the negative surface dipole formed on GaAs due to monolayer deprotonation causes an enhancement of the downward interfacial band bending. The space charge layer modifications were correlated to intermolecular electrostatic interactions and semiconductor depletion characteristics.     

Nanogyroids incorporating multivalent lipids: enhanced membrane charge density and pore forming ability for gene silencing

The self-assembly of a custom-synthesized pentavalent cationic lipid (MVL5) and glycerol monooleate (GMO) with small interfering RNA (siRNA) results in the formation of a double-gyroid bicontinuous inverted cubic phase with colocalized lipid/siRNA domains as shown by synchrotron X-ray scattering and fluorescence microscopy. The high charge density (due to MVL5) and positive Gaussian modulus of the GMO-containing membranes confer optimal electrostatic and elastic properties for endosomal escape, enabling efficient siRNA delivery and effective, specific gene silencing.     

Sol–gel derived silver-incorporated titania thin films on glass: bactericidal and photocatalytic activity

Titanium dioxide (TiO₂) and silver-containing TiO₂ (Ag-TiO₂) thin films were prepared on silica pre-coated float glass substrates by a sol–gel spin coating method. The bactericidal activity of the films was determined against Staphylococcus epidermidis under natural and ultraviolet (UV) illumination by four complementary methods; (1) the disk diffusion assay, (2) UV-induced bactericidal test, (3) qualitative Ag ion release in bacteria inoculated agar media and (4) surface topographical examination by laserscan profilometry. Photocatalytic activity of the films was measured through the degradation of stearic acid under UV, solar and visible light conditions. The chemical state and distribution of Ag nanoparticles, as well as the structure of the TiO₂ matrix, and hence the bactericidal and photocatalytic activity, is controlled by post-coating calcination treatment (100–650 °C). Additionally, under any given illumination condition the Ag-incorporated films were found to have superior bactericidal and photocataltyic activity performance compared to TiO₂ thin films. It is shown that with optimized thin film processing parameters, both TiO₂ and Ag-TiO₂ thin films calcined at 450 °C were bactericidal and photocatalytically active.     

Aerial video-calling system with eye-matching feature based on polarization-modulated aerial imaging by retro-reflection (p-AIRR)

Optical Review - We propose a method to realize video calling with an aerial display using a camera that has a direct view of the speaker's face, but which is not visible to the speaker....