Chemical Biological Sensors Based on Advances in Conducting Electroactive Polymers

Advances in conducting electroactive polymers (CEPs) have driven the design of novel chemical and biochemical sensors. The redox properties of CEPs have been intensely studied for more than two decades with emphasis on their synthesis and characterization. Little attention has been paid to the importance of mechanism in sensor designs. However, in order to design robust and stable sensors, it is important to understand how the polymer structure, morphology, adhesion properties and microenvironment affect sensor performance. This work describes how chemical and biological sensors have been designed, fabricated, characterized and tested based on the fundamental understanding in CEPs. The use of photopolymerized conducting polymers in sensor designs is described. Four focus areas are presented in which the electronic properties of CEPs have enabled the design of novel sensors for organics, nucleic acids, biological molecules, vapors and metal ions.     

X‐Band DNP Hyperpolarization of Viscous Liquids and Polymer Melts

NMR studies of synthetic polymers and biomacromolecules, which provide insight into the conformation and dynamics of these materials, can benefit strongly from the increased sensitivity offered by dynamic nuclear polarization (DNP) and other hyperpolarizing methods. In this study ¹H DNP nuclear spin hyperpolarization of two polybutadiene samples, representing a supercooled liquid and an entangled polymer melt, is demonstrated at 0.35 T magnetic field strength and at temperatures between −80 and +50 °C. Electron spin polarization transfer from the α,γ‐bisdiphenylene‐β‐phenylallyl radical to the sample nuclei is achieved by the Overhauser and solid effect. DNP signal enhancements are studied, varying the electron spin resonance offset, microwave power, and sample temperature. The influence of spin relaxation times, line widths, and molecular dynamics are discussed. The results show promising, up to 15‐fold NMR signal enhancements using noncryogenic temperatures and an inexpensive setup that is less technically demanding than current high‐field DNP setups.

     

Electron Transfer in Peptides: On the Formation of Silver Nanoparticles

Some microorganisms perform anaerobic mineral respiration by reducing metal ions to metal nanoparticles, using peptide aggregates as medium for electron transfer (ET). Such a reaction type is investigated here with model peptides and silver as the metal. Surprisingly, Ag⁺ ions bound by peptides with histidine as the Ag⁺‐binding amino acid and tyrosine as photoinducible electron donor cannot be reduced to Ag nanoparticles (AgNPs) under ET conditions because the peptide prevents the aggregation of Ag atoms to form AgNPs. Only in the presence of chloride ions, which generate AgCl microcrystals in the peptide matrix, does the synthesis of AgNPs occur. The reaction starts with the formation of 100 nm Ag@AgCl/peptide nanocomposites which are cleaved into 15 nm AgNPs. This defined transformation from large nanoparticles into small ones is in contrast to the usually observed Ostwald ripening processes and can be followed in detail by studying time‐resolved UV/Vis spectra which exhibit an isosbestic point.     

Protein immobilization on epoxy-activated thin polymer films: effect of surface wettability and enzyme loading

A series of epoxy-activated polymer films composed of poly(glycidyl methacrylate/butyl methacrylate/hydroxyethyl methacrylate) were prepared. Variation in comonomer composition allowed exploration of relationships between surface wettability and Candida antartica lipase B (CALB) binding to surfaces. By changing solvents and polymer concentrations, suitable conditions were developed for preparation by spin-coating of uniform thin films. Film roughness determined by AFM after incubation in PBS buffer for 2 days was less than 1 nm. The occurrence of single CALB molecules and CALB aggregates at surfaces was determined by AFM imaging and measurements of volume. Absolute numbers of protein monomers and multimers at surfaces were used to determine values of CALB specific activity. Increased film wettability, as the water contact angle of films increased from 420 to 550, resulted in a decreased total number of immobilized CALB molecules. With further increases in the water contact angle of films from 55 degrees to 63 degrees, there was an increased tendency of CALB molecules to form aggregates on surfaces. On all flat surfaces, two height populations, differing by more than 30%, were observed from height distribution curves. They are attributed to changes in protein conformation and/or orientation caused by protein-surface and protein-protein interactions. The fraction of molecules in these populations changed as a function of film water contact angle. The enzyme activity of immobilized films was determined by measuring CALB-catalyzed hydrolysis of p-nitrophenyl butyrate. Total enzyme specific activity decreased by decreasing film hydrophobicity.     

Infrared multiple photon dissociation spectroscopy of potassiated proline

The structure of proline in [proline + K]+ has been investigated in the gas phase using high level DFT and MP2 calculations and infrared photo dissociation spectroscopy with a free electron laser (FELIX). The respective FELIX spectrum of [proline + K]+ matches convincingly the calculated spectra of two structurally closely related and nearly iso-energetic zwitterionic salt bridge (SB) structures. An additional unresolved band at approximately 1725 cm(-1) matching with the characteristic CO stretching mode of charge solvation (CS) structures points toward the presence of a minor population of these conformers of proline in [proline + K]+. However, theory predicts a significant energy gap of 18.9 kJ mol(-1) (B3LYP/6-311++G(2d,2p)) or 15.6 kJ mol(-1) (MP2) between the lowest CS conformer of proline and the clearly favored SB structure.     

The formyloxyl radical: electrophilicity,C–H bond activation and anti-Markovnikov selectivity in the oxidation of aliphatic alkenes

In the past the formyloxyl radical, HC(O)O˙, had only been rarely experimentally observed, and those studies were theoretical-spectroscopic in the context of electronic structure. The absence of a convenient method for the preparation of the formyloxyl radical has precluded investigations into its reactivity towards organic substrates. Very recently, we discovered that HC(O)O˙ is formed in the anodic electrochemical oxidation of formic acid/lithium formate. Using a [Co^IIIW₁₂O₄₀]⁵⁻ polyanion catalyst, this led to the formation of phenyl formate from benzene. Here, we present our studies into the reactivity of electrochemically in situ generated HC(O)O˙ with organic substrates. Reactions with benzene and a selection of substituted derivatives showed that HC(O)O˙ is mildly electrophilic according to both experimentally and computationally derived Hammett linear free energy relationships. The reactions of HC(O)O˙ with terminal alkenes significantly favor anti-Markovnikov oxidations yielding the corresponding aldehyde as the major product as well as further oxidation products. Analysis of plausible reaction pathways using 1-hexene as a representative substrate favored the likelihood of hydrogen abstraction from the allylic C–H bond forming a hexallyl radical followed by strongly preferred further attack of a second HC(O)O˙ radical at the C1 position. Further oxidation products are surmised to be mostly a result of two consecutive addition reactions of HC(O)O˙ to the C C double bond. An outer-sphere electron transfer between the formyloxyl radical donor and the [Co^IIIW₁₂O₄₀]⁵⁻ polyanion acceptor forming a donor–acceptor [D⁺–A⁻] complex is proposed to induce the observed anti-Markovnikov selectivity. Finally, the overall reactivity of HC(O)O˙ towards hydrogen abstraction was evaluated using additional substrates. Alkanes were only slightly reactive, while the reactions of alkylarenes showed that aromatic substitution on the ring competes with C–H bond activation at the benzylic position. C–H bonds with bond dissociation energies (BDE) ≤ 85 kcal mol⁻¹ are easily attacked by HC(O)O˙ and reactivity appears to be significant for C–H bonds with a BDE of up to 90 kcal mol⁻¹. In summary, this research identifies the reactivity of HC(O)O˙ towards radical electrophilic substitution of arenes, anti-Markovnikov type oxidation of terminal alkenes, and indirectly defines the activity of HC(O)O˙ towards C–H bond activation.

The formyloxyl radical, formed electrochemically, is electrophilic, yields anti-Markovnikov oxidation products from alkenes, and is effective for C–H bond activation.     

Trans-cis octahedral interconversion pathway in diorganotin compounds

Using structural data from bis(bidentate)diorganotin compounds in the Cambridge Structural Database a potential pathway for trans-cis interconversion is envisaged with nondissociative Sn-donor bonds and retaining metal coordination number 6. C-Sn-C bond angles in the range 180-145° correspond to skewed trapezoid bipyramidal geometry for 6- and 5-membered O,O′ chelates; geometries that resemble the transition state of the trans-cis pathway starts forming at about C-Sn-C 134°. cis-Diorganotins explored in this work have C-Sn-C bond angles in the range 102-110°; it is the statistically favored configuration for diphenyltins. The proposed trans-cis conversion pathway is deduced from a series of geometries associated with decreasing the C-Sn-C bond angle and shows 2 weakly (secondary) bound chelating atoms lengthening their bonds until near the transition state and later strengthening; they end up cis to each other and opposite to the organic groups. Conversely, the other 2 (primary) donors shorten their bonds until the transition state is reached and later lengthen; they end up trans to each other. The entire transformation from trans to cis configuration occurs with relative rotation of 3 bonds.     

Symmetry-breaking substitutions of [Re(CN)8]3- into the centered, face-capped octahedral clusters (CH3OH)24M9M'6(CN)48 (M = Mn, Co; M = Mo, W)

The diamagnetic complex [Re(CN)8]3- is shown to react with Mn2+ ions in methanol to generate the centered, face-capped octahedral cluster (CH3OH)24Mn9Re6(CN)48, which is structurally analogous to (CH3OH)24Mn9Mo6(CN)48. Related reactions involving stoichiometric mixtures of octacyanometalate complexes generate the substituted species (CH3OH)24Mn9Mo5Re(CN)48, (CH3OH)24Co9Mo5Re(CN)48, (CH3OH)24Mn9Mo3Re3(CN)48, (CH3OH)24Mn9W5Re(CN)48 and (CH3OH)24Co9W5Re(CN)48, in which the O(h) symmetry of the cluster core is broken. Reassessment of the magnetic properties of the Mn9Mo6(CN)48 cluster confirm that it possesses a ground state spin of S = 39/2, but does not exhibit single-molecule-magnet behavior. Lowering the symmetry of the molecule by substitutions of ReV at one or three of the MoV sites does not lead to an overall increase in the magnetic anisotropy, as probed by ac magnetic susceptibility measurements. A similar result occurs for the other substituted species, with the important exception of the new single-molecule magnet (CH3OH)24Co9W5Re(CN)48, for which the spin reversal barrier is significantly reduced relative to that observed previously in (CH3OH)24Co9W6(CN)48.