Packing Chromatic Number of Base-3 Sierpiński Graphs

The packing chromatic number \(\chi _{\rho }(G)\) of a graph G is the smallest integer k such that there exists a k-vertex coloring of G in which any two vertices receiving color i are at distance at least \(i+1\). Let \(S^n\) be the base-3 Sierpiński graph of dimension n. It is proved that \(\chi _{\rho }(S^1) = 3\), \(\chi _{\rho }(S^2) = 5\), \(\chi _{\rho }(S^3) = \chi _{\rho }(S^4) = 7\), and that \(8\le \chi _\rho (S^n) \le 9\) holds for any \(n\ge 5\).     

High-performance liquid chromatographic/ion-trap mass spectrometric speciation of aquatic mercury as its pyrrolidinedithiocarbamate complexes

Mercury-pyrrolidinedithiocarbamate complexes are first time used for speciation of aquatic mercury with high-performance liquid chromatographic/ion trap-mass spectrometric method utilizing atmospheric pressure chemical ionization (APCI). The separation of the four mercury species was achieved in less than 5 min with a linear gradient profile of aqueous methanol from 70 up to 100% (v/v) in 4th min, isocratic elution at 100% up to 5th min and followed by a negative gradient to 70% in 6th min. The best separation was achieved on a reverse phase Zorbax Eclipse XDB C18 column (50 mm × 2.1 mm i.d., 1.8 μm particle size). The on-column limits of detection (injection volume 1 μL) were 370 pg for methylmercury (MeHg⁺), 280 pg for ethylmercury (EtHg⁺), 250 pg for phenylmercury (PhHg⁺) and 90 pg for inorganic mercury (Hg²⁺) when the data were collected in selective ion monitoring (SIM) mode. A method of isolation and preconcentration of the mercury species using a “home-made” C18 solid phase extraction (SPE) microcolumns was developed to enhance sensitivity of the method. The preconcentration factor as much as 2500 was achieved with on-column complex formation of mercury-pyrrolidinedithiocarbamate. Methanol (100%) was chosen for elution of preconcentrated mercury species. The method was applied for the determination of mercury species in river water samples.     

Combined isolation and purification procedures prior to the high-performance liquid chromatographic-ion-trap tandem mass spectrometric determination of estrogens and their conjugates in river sediments

A fast and sensitive analytical procedure has been developed for the simultaneous separation and determination of alpha-estradiol, beta-estradiol, estriol, estrone and ethynylestradiol and their sulfate, glucuronide and acetate conjugates in river sediments. The procedure includes a microwave-assisted extraction (MAE) with aqueous methanol (25:75, v/v) at 100 degrees C in 10 min, a clean-up on Oasis WAX cartridge and a high-performance liquid chromatography-ion-trap tandem mass spectrometry (HPLC-IT-MS/MS) with electrospray ionization. The recovery for each compounds ranged from 83 to 107% and the repeatability represented as RSDs ranged from 4.9 to 9.6%. The limits of detection (LODs) were down to 1 ng g(-1). The analytical performance of the method was evaluated using determination of free and conjugated estrogens in river sediments.     

Molecular assembly of metallacarboranes in water: light scattering and microscopy study

Polyhedral metallacarboranes are used mainly as ion-pairing agents and recently have been recognized as potent inhibitors of HIV protease. They are characterized by exceptional hydrophobicity, rigid geometry, delocalized negative charge, ion-pairing behavior, and strong acidity of their conjugated acids. The completely novel phenomenon, association of these promising pharmaceutical tectons in aqueous solutions, is described here. The behavior of two structural types of metallacarboranes, [bis(1,2-dicarbollide)cobaltate(1-)] and bis[(3)-1,2-dicarbollylcobalt]-(3,6)-1,2-dicarbacanastide(2-)], in aqueous solution was studied by a combination of static and dynamic light scattering and microscopy methods. Spherical aggregates with radii of ca. 100 nm and fairly monodisperse nanostructures were found in aqueous solutions. The behavior of nanoaggregates is fairly complex and depends on the concentration and aging of the solutions. The particles are stabilized in the solution by counterions. The formation of larger clusters upon dilution of bis(1,2-dicarbollide)cobaltate(1-) solutions was observed. The secondary aggregation can be suppressed by addition of NaCl. Gel permeation chromatography measurements of sodium bis(1,2-dicarbollide)cobaltate(1-) show that the majority of matallacarborane molecules form nanoaggregates and only a small amount of the metallacarborane remains molecularly soluble or forms small oligomers.     

Novel bicyclisation of unsaturated polyols in PdCl2-CuCl2-AcOH catalytic system

Novel type of Pd(II)-catalysed transformation of sugar-derived alkenitols furnishing 7-benzyloxy-2,5-dioxabicyclo[2.2.1]heptanes was discovered. The investigated bicyclisation displays an exceptional substrate selectivity towards xylo-configured unsaturated polyols. Moreover, a newly build stereogenic centre is formed in a diastereospecific cis-manner. The observed stereochemical preference was corroborated by modelling of pertinent transition states at the semiempirical level of theory (PM5). In addition, the single crystal X-ray analysis of an acylated analogue d-glycero-l-gulo-21 was done in order to establish the relative configuration of related bicyclic products.     

Effects of fish farm loading on sea grass Posidonia oceanica at Vrgada Island (Central Adriatic): a nitrogen stable isotope study

Analyses of nitrogen stable isotopes in the marine sea grass Posidonia oceanica were used to investigate the influence of fish farming on the coastal ecosystem of Vrgada Island in the Murter Sea, Central Adriatic. The results show a statistically significant 15N enrichment (up to 4.7 per thousand at p < 0.005) in P. oceanica leaf and shoot tissues from fish cage sites with respect to the unaffected offshore reference site of Lumbarda Reef Flat (Kornati Islands). Heavy nitrogen enrichment was also detected in other benthic organisms analysed during this study and is attributed to the absorption and assimilation of 15N-enriched fish farm derived nitrogen waste.     

ProBiS-database: precalculated binding site similarities and local pairwise alignments of PDB structures

ProBiS-Database is a searchable repository of precalculated local structural alignments in proteins detected by the ProBiS algorithm in the Protein Data Bank. Identification of functionally important binding regions of the protein is facilitated by structural similarity scores mapped to the query protein structure. PDB structures that have been aligned with a query protein may be rapidly retrieved from the ProBiS-Database, which is thus able to generate hypotheses concerning the roles of uncharacterized proteins. Presented with uncharacterized protein structure, ProBiS-Database can discern relationships between such a query protein and other better known proteins in the PDB. Fast access and a user-friendly graphical interface promote easy exploration of this database of over 420 million local structural alignments. The ProBiS-Database is updated weekly and is freely available online at http://probis.cmm.ki.si/database.