Synthesis of new [[(3-substituted-5-isoxazolyl)-alkyliden]iminooxy]aminopropanol derivatives

The preparation of new [[(3-substituted-5-isoxazolyl)alkyliden]iminooxy]aminopropanol compounds is reported starting from the corresponding 1-isoxazolylalkanones. The ¹H- and ¹³C-nmr studies, carried out to establish the Z- and E-configuration of new derivatives, are also described.     

Resonance Raman effect of the Mo2Cl4−8 ion: A re-examination

The resonance Raman effect of (NH₄)₅Mo₂Cl₉·H₂O was studied at both room and liquid nitrogen temperature. It is shown that the previous explanation, given by other authors, for the appearance of the resonance Raman spectrum excited by 568.2 nm is not a correct one. Based on the Raman and electronic spectra an explanation is suggested for this behavior.     

Synthesis of novel rigid-rod and tripodal azulene chromophores

Two novel azulene chromophores 1 and 2 were synthesized to study dynamics of ultrafast electron injection at the interface of TiO₂ semiconductor nanoparticles. Fluorescence quenching was observed upon binding.     

Dynamical Aspects of TEM-1 β-Lactamase Probed by Molecular Dynamics

The dynamical aspects of the fully hydrated TEM-1 β-lactamase have been determined by a 5 ns Molecular Dynamics simulation. Starting from the crystallographic coordinates, the protein shows a relaxation in water with an overall root mean square deviation from the crystal structure increasing up to 0.17 nm, within the first nanosecond. Then a plateau is reached and the molecule fluctuates around an equilibrium conformation. The results obtained in the first nanosecond are in agreement with those of a previous simulation (Diaz et al., J. Am. Chem. Soc., (2003) 125, 672–684). The successive equilibrium conformation in solution shows an increased mobility characterized by the following aspects. A flap-like translational motion anchores the Ω-loop to the body of the enzyme. A relevant part of the backbone dynamics implies a rotational motion of one domain relative to the other. The water molecules in the active site can exchange with different residence times. The H-bonding networks formed by the catalytic residues are frequently interrupted by water molecules that could favour proton transfer reactions. An additional simulation, where the aspartyl dyad D214–D233 was considered fully deprotonated, shows that the active site is destabilized.     

On the effect of a point mutation on the reactivity of CuZn superoxide dismutase: a theoretical study

In this paper, we investigate the effects of a point mutation on the enzymatic activity of copper-zinc superoxide dismutase, which we recently studied in detail by means of a theoretical-computational procedure. Comparison of the reactivity of the initial catalytic steps in this mutant (G93A mutation far from the active site) with our previous data, reveals the beautiful mechanical-dynamical architecture of the enzyme, altered by such an apparently irrelevant mutation. Finally, our results suggest a possible atomic-molecular-based explanation for the mutant-pathology correlation, in line with the most recent experimental data.     

Ordered patterning of nanometric rings of single molecule magnets on polymers by lithographic control of demixing

We report a new patterning process which takes place as a result of demixing of a binary polymer/solute mixture. An efficient, sustainable approach for ordering nanosized rings of so-called single molecule magnets (SMMs) is thus provided. It exploits the self-organization process in which SMM patterned film evolves to a spatially correlated pattern of nanosized rings. At long time, the anisotropic patterning of the film drives the ring to coalesce, into parallel lines of nanometric width.     

Investigating the interactions of hyaluronan derivatives with biomolecules. The use of diffusional NMR techniques

[Chemical structure: see text] The interactions between a biomaterial and biomolecules present in body fluids often determine the fate of the biomaterial. This paper presents a study on hyaluronan (HA)-containing materials (in soluble or colloidal form) that focuses on their interactions with lipids and proteins and for the first time uses PFG NMR as an analytical technique for probing these events. The interactions of HA-based polymers with phospholipids (DPPC and DPPG liposomes) are shown to depend both on charge and hydrophobicity factors. Despite the difference in behavior between albumin (substantially non-adhesive) and fibrinogen (adhesive), the interactions of the polymers with proteins do not seem to be based on hydrophobic effects but on surface polar interactions.     

A fully coupled 3-D mixed finite element model of Biot consolidation

The numerical solution to the Biot equations of 3-D consolidation is still a challenging task because of the ill-conditioning of the resulting algebraic system and the instabilities that may affect the pore pressure solution. Recently new approaches have been advanced based on mixed formulations. In the present paper a fully coupled 3-D mixed finite element model is developed with the aim at alleviating the pore pressure numerical oscillations at the interface between materials with different permeabilities. A solution algorithm is implemented that takes advantage of the block structure of the discretized problem. The proposed model is verified against well-known analytical solutions and successfully experimented with in realistic applications of soil consolidation.