Crystalline‐Sponge‐Based Structural Analysis of Crude Natural Product Extracts

Characterization of complex natural product mixtures to the absolute structural level of their components often requires significant amounts of starting materials and lengthy purification process, followed by arduous structure elucidation efforts. The crystalline sponge (CS) method has demonstrated utility in the absolute structure elucidation of isolated organic compounds at miniscule quantities compared to conventional methods. In this work, we developed a new CS‐based workflow that greatly expedites the in‐depth structural analysis of crude natural product extracts. Using a crude extract of the red alga Laurencia pacifica, we showed that CS affinity screening prior to compound isolation enables prioritization of analytes present in the extract, and we subsequently resolved the molecular structures of six sesquiterpenes with stereochemical clarity from around 10 mg crude extract. This study demonstrates a new chemotyping workflow that can greatly accelerate natural product discovery from complex samples.     

Cover Picture

The cover picture shows a section of the electron charge density of the first metal carbide endohedral metallofullerene (Sc(2)C(2))@C(84) obtained from a synchrotron X-ray powder diffraction study by the maximum entropy method (MEM). The several density maxima, which correspond to scandium and carbon atoms, are clearly seen inside the C(84) carbon cage. The MEM charge density distribution also reveals that the C(84) cage has D(2d) symmetry (no. 23) and that the C(2) axis is parallel to the <100> face-centered cubic (fcc) direction of the unit cell. As a consequence of the site symmetry being 4mm, the C(2) axis of (Sc(2)C(2))@C(84) is oriented to six equivalent <100> directions and shows a merohedral disorder. The resultant Sc small middle dot small middle dot small middle dotSc distances and C-C bond lengths of the Sc(2)C(2) cluster are 0.429(2) and 0.142(6) nm, respectively. The observed C-C bond length is between that of a typical single and a double bond, and is very close to that of the C-C bond (0.143 nm) combining two pentagons in a C(60) molecule. More about this fascinating structure can be found in the contribution by Shinohara and co-workers on p. 397 ff.     

Pentagonal-Dodecahedral La2 Charge Density in [80-Ih]Fullerene: La2@C80

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Photocrosslinking reaction of vinyl‐functional polyphenylsilsesquioxane sensitized with aromatic bisazide compounds

Photochemical reactions of aromatic azide groups were applied for a novel photosensitive silicone ladder polymer, that is, partially vinyl‐substituted polyphenylsilsesquioxane sensitized with aromatic bisazide compounds as a photocrosslinker. The photocrosslinking reaction in this system was investigated from the viewpoint of the efficiency of the photocrosslinker, that is, the ratio of the photocrosslinker consumed for crosslinking. The numbers of photodecomposed azide groups and crosslinks in the polymer were determined by Fourier transform infrared measurements. At a higher bisazide concentration, the predominant reaction of nitrenes formed as the intermediary radical by the photolysis of azide was a coupling reaction that could not contribute to the gelation of the polymer. The ratio of the bisazide compound consumed for crosslinking showed the highest value at its concentration of 3 wt % and decreased with the addition of a larger amount. The semiempirical molecular orbital calculations were applied to the theoretical analysis of the photoreaction of nitrenes using phenylnitrene as a model structure. The calculation results indicated that the coupling reaction of nitrenes should proceed more easily than the photocrosslinking reaction in N₂ atmosphere, and the fact that the oxidation of nitrenes should proceed exclusively in the atmosphere including O₂ agreed with the experimental results. © 2001 John Wiley & Sons, Inc. J Polym Sci Part A: Polym Chem 39: 4196–4205, 2001     

Dispersion mechanisms of comb‐type superplasticizers containing grafted poly(ethylene oxide) chains

This paper discusses the influence of graft chain length and dosage of comb‐type superplasticizers on adsorption and dispersion mechanisms, and their subsequent effect on the fluidity of concentrated limestone suspensions. Contrary to the results obtained from interparticle potential calculations, the fluidity of concentrated suspension is improved by the use of comb‐type polymers having shorter grafted chain length. The dispersion mechanism of comb‐type polymers in a concentrated suspension is evaluated from the perspective of molecular structure, the amount of adsorbed polymer, and the amount of entrapped water in the clusters of CaCO₃ particles. Furthermore, the addition of certain soluble salts, which can effect the concentration of Ca²⁺ in liquid phase of CaCO₃ suspensions, has been observed to decrease the adsorption of comb‐type polymers on CaCO₃. Thus, the polymer adsorption process on solid surfaces can be selectively influenced by certain types of ions.     

Photopolymerization of cyclohexene oxide by use of o-nitrobenzyl triphenylsilyl ether/aluminum compound catalyst. Dependence of catalyst activity on the structure of the silyl ether

o-Nitrobenzyl triphenylsilyl ehther/aluminum compound has been previously shown by the authors to act as catalyst in the photopolymerization of epoxides. The dependence of the structure of the silyl ether on the catalyst activity was examined. There were two steps in the photopolymerization. The first step (“Step 1”) is photodecomposition of the silyl ether to silanol. The second step (“Step 2”) is the initiation of polymerization by silanol and the aluminum compound. The introduction of an electron withdrawing group, Cl, CF₃, on the benzene ring bonded to Si made the quantum yield of Step 1 low, however, the rate of Step 2 was increased. The low quantum yield of Step 1 was explained in terms of the rate of electron transfer that is controlled by the relative electron density between the CH₂ and NO₂ in the o-nitrobenzyl group. The acceleration of Step 2 was explained in terms of an increase in silanol acidity that was promoted by the introduction of an electron withdrawing group. The overall rate of the photopolymerizatiol depends to a greater degree on the rate of Step 2 than on that of Step 1.     

Enantioselective synthesis of gabapentin analogues via organocatalytic asymmetric Michael addition of α-branched aldehydes to β-nitroacrylates

Michael addition reaction of α-branched aldehydes to β-nitroacrylates was successfully carried out by using a mixed catalyst consisting of a primary amino acid, L-phenylalanine, and its lithium salt to give β-formyl-β'-nitroesters having a quaternary carbon centre in good yields (up to 85%) with high enantioselectivity (up to 98% ee). By using benzyl β-nitroacrylates as Michael acceptors, the obtained β-formyl-β'-nitroesters were converted into various 4,4-disubstituted pyrrolidine-3-carboxylic acids including analogues of gabapentin (Neurotin(?)) in one step from the Michael adducts in high yields.     

The effect of various calcination treatments on the photocatalytic activity of a rod-type TiO<Subscript>2</Subscript> electrode for oxidation of ethanethiol

It was found that the photoelectrochemical performance and photocatalytic activity of rod-type TiO₂ electrodes were affected by various post-calcination treatments, for example, calcination in NH₃ or under vacuum. Post-calcination treatment in NH₃ at 773 K was particularly effective in increasing the photoelectrochemical performance and photocatalytic activity of rod-type TiO₂ electrodes. A unique photoelectrochemical circuit was constructed by connecting a rod-type TiO₂ electrode to a Pt electrode through a silicon solar cell in which the negative bias was applied on the rod-type TiO₂ electrode. It was found that the photoelectrochemical circuit can effectively oxidize ethanethiol in water into CO₂.