Toward the thermodynamic modeling of reacting ionic mixtures

Based on the Müller–Liu entropy principle and the axioms of constitutive theory, a continuum model for reacting ionic mixtures is presented. The influence of microscopic structure on the mixture dynamics is taken into account through the thermodynamics of polar materials. Moreover, mechanical balance laws for classical mixtures under influence of electromagnetic fields and quasi-electrostatic Maxwell’s equations are briefly shown. With an appropriate constitutive model for a diluted and isotropic mixture of non-volatile solutes and by considering the same temperature field for all constituents, constraints on constitutive quantities are imposed, and the conditions for the thermodynamic equilibrium are established from the entropy principle. Furthermore, the nonlinear nature of chemical reactions as well as the reciprocal nature of some irreversible processes is highlighted. Unlike the classical approach for electrolyte solutions, the current constitutive model incorporates thermoelectric and electro-kinetic phenomena into the phenomenological equations, providing a more comprehensive approach of electrolyte solutions dynamics.     

Sources of primary production to Arctic bivalves identified using amino acid stable carbon isotope fingerprinting*

ABSTRACT

Benthic invertebrates are a crucial trophic link in Arctic marine food webs. However, estimates of the contribution of different primary production sources sustaining these organisms are not well characterised. We measured the stable carbon isotope values (δ¹³C) of essential amino acids (EAAs) in muscle tissue from two common bivalve genera (Macoma spp. and Astarte spp.) collected in Hanna Shoal in the northeastern Chukchi Sea. Mixing models comparing the δ¹³C_EAA fingerprints of the bivalves to a suite of primary production endmembers revealed relatively high contributions of EAAs from phytoplankton and bacteria in both species. We also examined whether δ¹³C_EAA fingerprints could be produced from the EAAs preserved in bivalve shells, which could allow primary production sources to be estimated from ancient bivalve shells. The δ¹³C_EAA fingerprints from a suite of paired modern bivalve shells and muscle from Macoma calcarea from across the Chukchi Sea revealed a correspondence between the estimates of the dominant primary production source of EAAs derived from analyses of these two tissue types. Our findings indicate that δ¹³C_EAA fingerprinting of marine bivalves can be used to examine dominant organic matter sources in the Arctic marine benthos in recent years as well as in deeper time.     

Limitations of FTIR Spectroscopy for Detection of Water in Spinel Group Minerals,When IVFe2+ is Incorporated into the Crystal Structure

Fourier‐transform infrared (FTIR) spectroscopy can be used for detection of low hydrogen abundances as well as for finding information on hydrogen speciation in nominal anhydrous minerals (NAMs). A Perkin‐Elmer 1760 X FTIR plus micro‐FTIR spectrometer was used to apply this established method to natural spinel phases in order to detect water that is possibly incorporated into the crystal structure. Here, the limits of FTIR are assessed for detection of OH, when only traces of iron are incorporated into the crystal structure of natural spinel group minerals. A problem occurred because of the high intensity of the iron absorption bands, which absorb at similar wavenumbers to OH absorption bands.     

(1‐Butyl‐4‐methyl‐pyridinium)[Cu(SCN)2]: A Coordination Polymer and Ionic Liquid

The compound (C₄C₁py)[Cu(SCN)₂], (C₄C₁py=1‐Butyl‐4‐methyl‐pyridinium), which can be obtained from CuSCN and the ionic liquid (C₄C₁py)(SCN), turns out to be a new organic–inorganic hybrid material as it qualifies both, as a coordination polymer and an ionic liquid. It features linked [Cu(SCN)₂]^? units, in which the thiocyanates bridge the copper ions in a μ_1,3‐fashion. The resulting one‐dimensional chains run along the a axis, separated by the C₄C₁py counterions. Powder X‐ray diffraction not only confirms the single‐crystal X‐ray structure solution but proves the reformation of the coordination polymer from an isotropic melt. However, the materials shows a complex thermal behavior often encountered for ionic liquids such as a strong tendency to form a supercooled melt. At a relatively high cooling rate, glass formation is observed. When heating this melt in differential scanning calorimetry (DSC) and temperature‐dependent polarizing optical microscopy (POM), investigations reveal the existence of a less thermodynamically stable crystalline polymorph. Raman measurements conducted at 10 and 100 °C point towards the formation of polyanionic chain fragments in the melt. Solid‐state UV/Vis spectroscopy shows a broad absorption band around 18 870 cm^?1 (530 nm) and another strong one below 20 000 cm^?1 (<500 nm). The latter is attributed to the d(Cu^I)→π*(SCN)‐MLCT (metal‐to‐ligand charge transfer) transition within the coordination polymer yielding an energy gap of 2.4 eV. At room temperature and upon irradiation with UV light, the material shows a weak fluorescence band at 15 870 cm^?1 (630 nm) with a quantum efficiency of 0.90(2) % and a lifetime of 131(2) ns. Upon lowering the temperature, the luminescence intensity strongly increases. Simultaneously, the band around 450 nm in the excitation spectrum decreases.     

Detection and Analysis of Low‐Abundance Cell‐Surface Biomarkers Using Enzymatic Amplification in Microfluidic Droplets

Finding the few : Cell‐surface proteins are useful disease biomarkers, but current high‐throughput methods are limited to detecting cells expressing more than several hundred proteins. Enzymatic amplification in microfluidic droplets (see picture) is a high‐throughput method for detection and analysis of cell‐surface biomarkers expressed at very low levels on individual human cells. Droplet optical labels allow concurrent analysis of several samples.

     

Trace Element Determination in Diesel Particulates by Total-Reflection X-Ray Fluorescence Analysis

 Particulate matter of Diesel emissions collected from diluted exhaust during standard test runs with two Diesel fuels of different sulfur content was analysed by total-reflection X-ray fluorescence (TXRF). The trace elements determined were S, Ca, Cr, Mn, Fe, Ni, Cu, Zn and Pb. Additionally, some filter materials were tested with respect to their applicability for sample collection. Quartz fibre filters were found to be most suitable, both from a technical and a chemical point of view. A clear reduction of total particulate emissions during the whole test was observed when the fuel with very low sulfur content was used. In addition, it was found that the wear metal content of particulate matter emitted by a cold engine was higher than that observed during normal engine working temperature. Received September 10, 1998. Revision March 2, 1999     

Physiological, biochemical and molecular characteristics of cryopreserved Hypericum perforatum L. shoot tips

Hypericum perforatum L. in vitro cultured shoot tips were characterised at the physiological, biochemical and molecular levels following recovery from cryogenic treatment using the plant vitrification solutions PVS2 and PVS3. This comparative study revealed an increase in recovery and regrowth of explants cryoprotected with PVS3. Among the physiological markers only lipid peroxidation in the regenerants treated with PVS2 significantly increased indicating membrane damage. Genotype-specific interactions were found in most characteristics studied, with some variation detected within control and cryopreserved samples. Analyses of metabolite biosynthesis and genetic stability showed no significant differences in hypericin content, RAPD and minisatellite amplification profiles between PVS2- and PVS3-treated explants. This study demonstrates and discusses the criteria selective for PVS3 to improve the cryopreservation of H. perforatum L.     

Characterization of cysteinylation of pharmaceutical-grade human serum albumin by electrospray ionization mass spectrometry and low-energy collision-induced dissociation tandem mass spectrometry

Three samples of albumin derived from human plasma (pharmaceutical grade, HSA) obtained from different commercial sources were investigated for their micro-heterogeneities by means of electrospray ionization (ESI) ion trap mass spectrometry (ITMS). The study covered MS analyses of the intact proteins as well as on the tryptic peptide level. The intact protein samples were analyzed without any separation step except for simple desalting. With these samples we observed in the positive ion ESI mass spectra that the multiply charged ion signals of HSA consisted of a number of fully or partly resolved peaks with relative intensities depending on the analyzed sample. The non-modified form of HSA was detected in the three HSA preparations at m/z values of 66448 +/- 3.6, 66450 +/- 0.6 and 66451 +/- 3.2 ([MH]+), respectively. The value calculated from the amino acid sequence was 66439. The second compound present with high intensity (in two cases the base peak in the deconvoluted mass spectrum) is interpreted as a modified HSA, and the molecular mass increase in relation to the unmodified HAS was between 116 and 118 Da (m/z of 66 564, 66 567 and 66 569), suggesting the presence of a covalently bound cysteine residue. A further peak in the deconvoluted ESI spectra was found in all three samples with rather low signal/noise ratio at m/z 66 619, 66 621 and 66 613, respectively, which may correspond to a non-enzymatic glycation described in the literature. The verification of the proposed covalent HSA modifications was subsequently done on the peptide level using high-performance liquid chromatography (HPLC)/ESI-MS and HPLC/ESI-MS/MS including low-energy collision-induced dissociation (CID). Prior to the tryptic digestion, the HSA samples were alkylated without a prior reduction step. Following this procedure we detected peptides of the sequence T21-41 that included the Cys-34 residue in both forms: cysteinylated (m/z 639.15 [M+4H]4+) as well as vinylpyridine-alkylated (m/z 635.69 [M+4H]4+, which means in its previously native free SH form). In the next step on-line LC/ESI low-energy CID MS/MS experiments were performed to verify these two proposed structures. By means of MS/MS analysis of the mentioned ions the described modification (cysteinylation) at the Cys-34 residue could be proven. This abundant modification of HSA in pharmaceutical-grade preparations could be unambiguously identified as cysteinylation at the Cys-34 residue. On the other hand, the proposed non-enzymatic glycation was not detectable on the peptide level in the on-line HPLC/ESI-MS mode, maybe due to the low concentration in the three samples under investigation.