Gas-phase structure of protonated histidine and histidine methyl ester: combined experimental mass spectrometry and theoretical ab initio study

Gas-phase H/D exchange experiments with CD3OD and D2O and quantum chemical ab initio G3(MP2) calculations were carried out on protonated histidine and protonated histidine methyl ester in order to elucidate their bonding and structure. The H/D exchange experiments show that both ions have three equivalent fast hydrogens and one appreciably slower exchangeable hydrogen assigned to the protonated amino group participating in a strong intramolecular hydrogen bond (IHB) with the nearest N(sp2) nitrogen of the imidazole fragment and to the distal ring NH-group, respectively. It is taken for granted that the proton exchange in the IHB is much faster than the H/D exchange. Unlike in other protonated amino acids (glycine, proline, phenylalanine, tyrosine, and tryptophan) studied earlier, the exchange rate of the carboxyl group in protonated histidine is slower than that of the amino group. The most stable conformers and the enthalpies of neutral and protonated histidine and its methyl ester are calculated at the G3(MP2) level of theory. It is shown that strong intramolecular hydrogen bonding between the amino group and the imidazole ring nitrogen sites is responsible for the stability and specific properties of the protonated histidine. It is found that the proton fluctuates between the amino and imidazole groups in the protonated form across an almost vanishing barrier. Proton affinity (PA) of histidine calculated by the G3(MP2) method is 233.2 and 232.4 kcal mol(-1) for protonation at the imidazole ring and at the amino group nitrogens, respectively, which is about 3-5 kcal mol(-1) lower than the reported experimental value.     

Improvement of methods for molecular dynamics integration

An application of symplectic implicit Runge–Kutta (RK ) integration schemes, the s-stage Gauss–Legendre Runge–Kutta (GLRK ) methods of order 2s, for the numerical solution of molecular dynamics (MD ) equation is described. The two-stage fourth-order GLRK method, the implicit midpoint rule, and the three-stage diagonally implicit RK method of order four are studied. The fixed-point iteraction was used for solving the resulting nonlinear system of equations. The algorithms were applied to a complex system of N particles interacting through a Lennard-Jones potential. The proposed symplectic methods for MD integration permit a wide range of time steps, are highly accurate and stable, and are thus suitable for the MD integration. © 1994 John Wiley & Sons, Inc.     

Existence d'isomeres e et z d'ylures de cycloimmonium

E and Z isomers of p-nitrobenzoyl, 4-p-tolyl[1-2-4]triazolum methylide 5b and p-nitrobenzoyl, 4-p-phenyl[1-2-4]triazolium methylide 5e, have been characterised.     

IR- und Raman-Spektren einiger Kaliumpentafluorometallate-monohydrate

The IR- and Raman Spectra of several compounds of the stoichiometryM ₂ ^I M ^IIIF₅H₂O and their deuterated analogs have been interpreted on the basis of their crystal structures. The compounds studied were divided into two classes regarding the bonding of water molecules. The main spectroscopic difference between the two classes was found in the region of H₂O vibrations in good agreement with theoretical predictions. The metal—fluorine and metal—oxygene vibrations gave no direct information concerning the two types of water.     

Optimal orthogonalization processes

Two optimal orthogonalization processes are devised toorthogonalize,possibly approximately,the columns of a very large and possiblysparse matrix A∈C^n×k.Algorithmically the aim is,at each step,to optimallydecrease nonorthogonality of all the columns of A.One process relies on using translated small rank corrections.Another is a polynomial orthogonalization process forperforming the L?wdin orthogonalization.The steps rely on using iterative methods combined,preferably,with preconditioning which can have a dramatic effect on how fast thenonorthogonality decreases.The speed of orthogonalization depends on howbunched the singular values of A are,modulo the number of steps taken.These methods put the steps of the Gram-Schmidt orthogonalizationprocess into perspective regardingtheir(lack of)optimality.The constructions are entirely operatortheoretic and can be extended to infinite dimensional Hilbert spaces.     

Precipitation and recrystallization of uniform CuCl particles formed by aggregation of nanosize precursors

Uniform, spherical CuCl particles were obtained by mixing aqueous solutions of CuCl ₂ and ascorbic acid in the presence of polyvinylpyrrolidone (PVP) as dispersing agent. The size and the uniformity of the resulting particles depended on the volume ratio of the reactant solutions, their concentrations, the distribution of the stabilizers, and the mixing method. The single jet precipitation yielded large spheres of broad size distributions, while the particles obtained by the double jet technique were rather uniform in size. The final colloidal CuCl particles were formed by the aggregation of nanocrystals, initially generated in the system. Depending on the pH of the reaction mixture, these particles slowly change to large CuCl crystals on aging in the mother liquor.     

UV-VIS and CD-spectroscopic investigations of intermolecular interactions of bile pigments with small proteins

Summary The intermolecular complex formation of bilirubin and biliverdin with two proteins (basic pancreatic trypsin inhibitor and lysozyme) were studied by optical and chiroptical methods. Evidence for specific intermolecular interactions of biliverdin with both proteins was found. Bilirubin forms a soluble complex only with lysozyme.

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UV-VIS und CD-spektroskopische Untersuchungen intermolekularer Wechselwirkungen von Gallenpigmenten mit kleinen Proteinen

Zusammenfassung Die intermolekulare Komplexbildung von Bilirubin und Biliverdin mit zwei Proteinen (basischer pankreatischer Trypsininhibitor und Lysozym) wurden mittels optischer und chiroptischer Spektroskopie untersucht. Für Biliverdin konnten intermolekulare Wechselwirkungen mit beiden Proteinen nachgewiesen werden. Bilirubin bildet nur mit Lysozym einen löslichen Komplex.

     

Beiträge zur Chemie der Pyrrolpigmente, 82. Mitt.: Wasserlösliche Polymere mit kovalent gebundenen violinoiden und 2,3-dihydro-verdinoiden Gallenfarbstoffen

Summary A violinoid and a 2,3-dihydrobilindione chromophore is attachedvia an appendix anchored at rings A of the pigments by means of reacting them with the polyacryl-N-acryloxysuccinimid copolymer to yield water-soluble chromopolymers. They are characterized by a molecular mass of about 4000 to 6000 and a relation of one chromophoric unit per 6 to 22 monomers. Their absorption spectra and circular dichroism recorded in water and dimethylsulfoxide as solvents are discussed with respect to structural aspects, and in comparison with monomeric chromophore derivatives.

Herrn Prof. Dr. K. Schlögl mit den besten Wünschen zum 65. Geburtstag gewidmet