Spatial distribution of AT- and GC-rich DNA within interphase cell nuclei of Triatoma infestans Klug

Heterochromatin bodies in single- and multichromocentered interphase cell nuclei of Triatoma infestans, a vector of Chagas disease, have been suggested to contain AT-rich DNA, based on their positive response to Q-banding and Hoechst 33248 treatment. No information exists on whether GC-rich DNA is also present in these nuclei and whether it plays a role on chromatin condensation. Considering that methodologies more precise than those previously used to determine DNA base composition in situ are currently available, and that the spatial distribution of chromatin areas differing in composition in interphase cell nuclei of different species is a matter of interest, the localization of AT- and GC-rich DNA in T. infestans nuclei is revisited here. The methodologies used included DAPI/AMD and CMA(3)/Distamycin differential staining, Feulgen-DNA image analysis following Msp I and Hpa II enzymatic digestion, 5-methylcytidine immunodetection, AgNOR response, confocal microscopy, and the 5-aza-2'-deoxycytidine (5-AZA) demethylation assay. The results identified the presence of AT-rich/GC-poor DNA in chromocenters and evenly distributed AT and GC sequences in euchromatin. A GC-rich DNA zone encircling the chromocenters was also found but it could not be associated with NOR regions. To corroborate the DNA AT-richness in T. infestans nuclei, bioinformatic analyses were also performed. Methylated cytosine was evident at some points of the chromocenters' edge in single- and multichromocentered nuclei and at the euchromatin of multichromocentered nuclei and could be transiently affected by the 5-AZA treatment. The present results suggest that in the particular case of chromocenters of the hemipteran T. infestans, cytosine methylation is not a relevant factor involved in chromatin condensation.     

Ultrastructural architecture of colonies of different morphologies produced by phenotypic switching of a clinical strain of Candida tropicalis and biofilm formation by variant phenotypes

Candida tropicalis has been identified as one of the most prevalent pathogenic yeast species of the Candida-non-albicans (CNA) group. Study of switching in C. tropicalis has not been the subject of extensive research. Therefore, we investigated switching event and characterized the ultrastructural architecture of different phenotypes and biofilm produced in a C. tropicalis clinical strain. Cells switched heritably, reversibly, and at a high frequency between four phenotypes readily distinguishable by the shape of colonies formed on agar at 25°C. SEM analysis was used to verify the architecture of whole Candida colonies at ultrastructural level. The smooth phenotype (parental phenotype) colony showed a hemispherical shape character, while the semi-smooth was characterized by the presence of shallow marginal depressions. The ring and rough phenotypes exhibited more complex architecture and were characterized by the presence of deep central and peripheral depressions areas. The biofilm-forming ability varied among the switch phenotypes. After 12h incubation, the smooth phenotype formed less biofilm compared to the other phenotypes (P<0.05). The electron microscopy analysis revealed that filamentation (pseudohyphae) was associated with ring and rough colonies. The ultrastructural analysis allowed the observation of the arrangement of individual cells within the colonies. At the deep central and peripheral depressions areas of the ring and rough colonies extracellular material was seen in different arrangements. The data presented here open new avenues to study a possible role for extracellular material in the formation and maintenance of the architecture of switch phenotypes in C. tropicalis. It is therefore essential that more strains be investigated to determine the biological significance of extracellular material in C. tropicalis phenotypic switching phenomenon.     

Time-periodic perturbation of a Liénard equation with an unbounded homoclinic loop

We consider a quadratic Liénard equation with an unbounded homoclinic loop, which is a solution tending in forward and backward time to a non-hyperbolic equilibrium point located at infinity. Under small time-periodic perturbation, this equilibrium becomes a normally hyperbolic line of singularities at infinity. We show that the perturbed system may present homoclinic bifurcations, leading to the existence of transverse intersections between the stable and unstable manifolds of such a normally hyperbolic line of singularities. The global study concerning the infinity is performed using the Poincaré compactification in polar coordinates, from which we obtain a system defined on a set equivalent to a solid torus in R³, whose boundary plays the role of the infinity. The transversality of the manifolds is proved using the Melnikov method and implies, via the Birkhoff-Smale Theorem, a complex dynamical behaviour of the perturbed system solutions in the finite part of the phase space. Numerical simulations are performed in order to illustrate this behaviour, which could be called “the chaos arising from infinity”, since it depends on the global structure of the Liénard equation, including the points at infinity. Although applied to a particular case, the analysis presented provides a geometrical approach to study periodic perturbations of homoclinic (or heteroclinic) loops to infinity of any planar polynomial vector field.     

Nonlinear perturbations of a ‐Laplacian equation with critical growth in

We prove the existence of solution for a class of ‐Laplacian equations where the nonlinearity has a critical growth. Here, we consider two cases: the first case involves the situation where the variable exponents are periodic functions. The second one involves the case where the variable exponents are nonperiodic perturbations.     

Research on calculus: what do we know and where do we need to go?

In this introductory paper we take partial stock of the current state of field on calculus research, exemplifying both the promise of research advances as well as the limitations. We identify four trends in the calculus research literature, starting with identifying misconceptions to investigations of the processes by which students learn particular concepts, evolving into classroom studies, and, more recently research on teacher knowledge, beliefs, and practices. These trends are related to a model for the cycle of research and development aimed at improving learning and teaching. We then make use of these four trends and the model for the cycle of research and development to highlight the contributions of the papers in this issue. We conclude with some reflections on the gaps in literature and what new areas of calculus research are needed.     

Extended gate field effect transistor using V2O5 xerogel sensing membrane by sol–gel method

Since the first use of glass electrode to the detection of pH, many efforts have been made to develop new techniques and methods. In this study, the pH sensing properties of an extended gate field effect transistor (EGFET) based on the vanadium pentoxide xerogel thin film is investigated. The vanadium pentoxide was prepared by a sol–gel route. The X-ray diffractogram indicates the presence of a lamellar structure of the vanadium pentoxide xerogel films. The film was investigated as a sensor in the pH range of 2–12 and the corresponding EGFET has a sensitivity of 58.1 mV/pH. This value suggests that the material is a promising candidate for applications as disposable biosensor.     

Radical of submodules and symmetric algebra

A prime ideal of the symmetric algebra of an R-module N is associated to every prime submodule M ?N and this assignment is then used to obtain a new characterization of the radical of a submodule. Several applications of these results are also included.     

A general strategy for the synthesis of difluoromethyl-containing pyrazoles, pyridines and pyrimidines

Difluoromethyl-containing heteroannulated pyridines, pyrimidines and pyrazoles are prepared by a two step method. The regioselective cyclizations of electron-excessive aminoheterocycles, hydrazines and amidines with CF₂Cl-substituted 1,3-dicarbonyl compounds provide the corresponding CF₂Cl-substituted heterocycles. Subsequent radical reactions with trimethylstannane or allyltrimethylstannane gave difluoromethyl-containing heteroannulated pyridines, pyrimidines and pyrazoles, respectively.     

Preparation of glycopolymer‐coated magnetite nanoparticles for hyperthermia treatment

In this article, magnetite nanoparticles (MNPs) coated with glycopolymer bearing glucose moieties were designed with optimal structural, colloidal, and magnetic properties for biomedical applications. MNPs with an average size of 17 ± 2 nm were synthesized by thermal decomposition process and then their surfaces were modified with active vinyl groups. Two different monomers were immobilized onto the surfaces: dopamine methacrylamide, a monomer with properties inspired on mussels adhesive capacity, or unprotected glycomonomer, 2‐{[(D ‐glucosamin‐2N‐yl)carbonyl]‐oxy}ethyl methacrylate. Afterward, the glycomonomer were polymerized at the interface of both vinyl functionalized MNPs by conventional radical polymerization. The resultant hybrid NPs were water dispersible presenting good stability in aqueous solution for long time periods. Moreover, the high density of carbohydrates at the surface of the magnetic NPs could confer targeting properties to the system as demonstrated by studies of their binding interactions with lectins, where the binding activity is higher as the glycopolymer content augments. The magnetic and magneto‐thermal properties of the synthesized hybrid NPs were evaluated. The magnetization curves reveal superparamagnetic features at 300 K, with high values of saturation magnetization. Furthermore, the hybrid glycoparticles show suitable heat dissipation power when exposed to alternating magnetic field conditions. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012     

Evaluation of transversal and longitudinal dispersion in a flow injection system by exploiting laser induced fluorescence: influence of flow-cell positioning

A fully mechanized set-up was built for the experimental determination of bi-dimensional dispersion with high spatial resolution (2400 μm²). Gravitational and wall effects in a single stream were evaluated by using time-based sampling and a micro-flow cell. Vertical upward and downward flows as well as horizontal flows were investigated. Ethylene glycol (MEG) and Rhodamine B in MEG were used as carrier and sample solutions, respectively. Longitudinal profiles were obtained by laser induced total fluorescence (LIF) at up to 19 transversal sites and combined to generate high-resolution bi-dimensional profiles. A two frontal maxima pattern was observed for all flows. The volumetric fraction of RB shape was highly stretched for downward flow and there was high asymmetry for horizontal flow. The sensitivity of three dispersion parameters was evaluated: maximum peak value, peak half-width at half-height, and peak area.Data modeling showed that the tanks-in-series was more sensitive to wall effects, had good adjustment with only one tank for upward and horizontal flow and needed two tanks for downward flow which was attributed to the latter having higher dispersion. A black box empirical modeling described better the gravitational effect and allowed to identify a parameter sensitive to upward and downward flow as well as hinting to two inner streams within the horizontal flow. It also pointed to a wall dispersion contribution of twice that of the liquid-liquid dispersion.