Tetrahydrometalate species VH(2)(H(2)), NbH(4), and TaH(4): matrix infrared spectra and quantum chemical calculations

Laser ablated V, Nb, and Ta atoms react with molecular hydrogen in excess neon at 4 K to give vanadium, niobium, and tantalum dihydrides that further react with H(2) to form VH(2)(H(2)), NbH(4), and TaH(4). The reaction products are identified by deuterium and deuterium hydride isotopic substitution. DFT and CCSD theoretical calculations are used to predict energies, geometries, and vibrational frequencies for these novel metal hydrides complex and molecules. The vanadium dihydride hydrogen complex, VH(2)(H(2)), is identified, while the niobium and tantalum tetrahydrides, NbH(4) and TaH(4,) with D(2d) symmetry structures are confirmed. Reactions of group 5 metal atoms with H(2) condensing in solid hydrogen gave VH(2)(H(2)) and the higher tetrahydride-hydrogen complexes NbH(4)(H(2))(4) and TaH(4)(H(2))(4).     

A perturbed pK(a) at the binding site of the nicotinic acetylcholine receptor: implications for nicotine binding

A series of tethered quaternary ammonium derivatives of Tyr have been incorporated into the binding site of the nicotinic acetylcholine receptor (nAChR) using the in vivo nonsense suppression method, producing constitutively active (self-gating) receptors. We have incorporated primary, secondary, and tertiary amine tethered agonists to give receptors whose constitutive activity can be modulated by pH. Lowering the pH protonates the tethered amine, giving it a positive charge and allowing it to reversibly activate the receptor. Tertiary and secondary tethered amines, TyrO3T and TyrO3S, have been successfully incorporated at alpha149 in the nAChR. Constitutive currents at pH 5.5 are 6 times those at pH 9.0. The pKa of TyrO3T in the binding site appears to be 6 or lower, differing substantially from its pKa in solution ( approximately 9.3). This local pKa perturbation has substantial implications for pharmacological research on the nAChR: of the tertiary agonists considered, noracetylcholine experiences this pKa perturbation, while nicotine does not.     

A parallel synthesis demonstration library of tri-substituted indazoles containing new antimutagenic/antioxidant hits related to benzydamine

A solution phase strategy for the multiple parallel synthesis of a demonstration library of indazoles is described by which regio-selectivity problems inherent to previous syntheses of this nucleus are largely overcome. Synthesis of selected components proceeded satisfactorily indicating that a fully realized library of indazole analogs could readily be produced using this methodology. Simple modifications of the basic nucleophilic aromatic substitution route unambiguously produce a range of N-1 substitutions (alkyl, aryl and aralkyl) in 50-75% yields. Next a range of substituents was introduced at the C-3 position in 50-80% yields by O-alkylation. Careful choice of reagents and reaction conditions were required to prevent by-product formation due to competing alkylation at N-2 (trace to 15% yields). When present, these contaminants were readily removed by chromofiltration. A third diversity site was sketched in at C-5 in 75-90% yield by reductive alkylation or acylation. Screening of some of the demonstration library members in vitro revealed highly active antioxidants suggesting that producing a full library would be worthwhile.     

Infrared spectra of aluminum hydrides in solid hydrogen: Al2H4 and Al2H6

The reaction of laser-ablated Al atoms and normal-H(2) during co-deposition at 3.5 K produces AlH, AlH(2), and AlH(3) based on infrared spectra and the results of isotopic substitution (D(2), H(2) + D(2) mixtures, HD). Four new bands are assigned to Al(2)H(4) from annealing, photochemistry, and agreement with frequencies calculated using density functional theory. Ultraviolet photolysis markedly increases the yield of AlH(3) and seven new absorptions for Al(2)H(6) in the infrared spectrum of the solid hydrogen sample. These frequencies include terminal Al-H(2) and bridge Al-H-Al stretching and AlH(2) bending modes, which are accurately predicted by quantum chemical calculations for dibridged Al(2)H(6), a molecule isostructural with diborane. Annealing these samples to remove the H(2) matrix decreases the sharp AlH(3) and Al(2)H(6) absorptions and forms broad 1720 +/- 20 and 720 +/- 20 cm(-1) bands, which are due to solid (AlH(3))(n). Complementary experiments with thermal Al atoms and para-H(2) at 2.4 K give similar spectra and most product frequencies within 2 cm(-1). Although many volatile binary boron hydride compounds are known, binary aluminum hydride chemistry is limited to the polymeric (AlH(3))( solid. Our experimental characterization of the dibridged Al(2)H(6) molecule provides an important link between the chemistries of boron and aluminum.     

Functionally Important Aromatic-Aromatic and Sulfur-π Interactions in the D2 Dopamine Receptor

The recently published crystal structure of the D3 dopamine receptor shows a tightly packed region of aromatic residues on helices 5 and 6 in the space bridging the binding site and what is thought to be the origin of intracellular helical motion. This highly conserved region also makes contacts with residues on helix 3, and here we use double mutant cycle analysis and unnatural amino acid mutagenesis to probe the functional role of several residues in this region of the closely related D2 dopamine receptor. Of the eight mutant pairs examined, all show significant functional coupling (Ω > 2), with the largest coupling coefficients observed between residues on different helices, C3.36/W6.48, T3.37/S5.46, and F5.47/F6.52. Additionally, three aromatic residues examined, F5.47, Y5.48, and F5.51, show consistent trends upon progressive fluorination of the aromatic side chain. These trends are indicative of a functionally important electrostatic interaction with the face of the aromatic residue examined, which is likely attributed to aromatic-aromatic interactions between residues in this microdomain. We also propose that the previously determined fluorination trend at W6.48 is likely due to a sulfur-π interaction with the side chain of C3.36. We conclude that these residues form a tightly packed structural microdomain that connects helices 3, 5, and 6, thus forming a barrier that prevents dopamine from binding further toward the intracellular surface. Upon activation, these residues likely do not change their relative conformation, but rather act to translate agonist binding at the extracellular surface into the large intracellular movements that characterize receptor activation.     

Reactive quenching of OH A (2)Σ(+) by O(2) and CO: Experimental and nonadiabatic theoretical studies of H- and O-atom product channels

The outcomes following collisional quenching of electronically excited OH A (2)Σ(+) by O(2) and CO are examined in a combined experimental and theoretical study. The atomic products from reactive quenching are probed using two-photon laser-induced fluorescence to obtain H-atom Doppler profiles, O ((3)P(J)) atom fine structure distributions, and the relative yields of these products with H(2), O(2), and CO collision partners. The corresponding H-atom translational energy distributions are extracted for the H + O(3) and H + CO(2) product channels, in the latter case revealing that most of the available energy is funneled into internal excitation of CO(2). The experimental product branching ratios show that the O-atom producing pathways are the dominant outcomes of quenching: the OH A (2)Σ(+) + O(2) → O + HO(2) channel accounts for 48(3)% of products and the OH A (2)Σ(+) + CO → O + HCO channel yields 76(5)% of products. In addition, quenching of OH A (2)Σ(+) by O(2) generates H + O(3) products [12(3)%] and returns OH to its ground X (2)Π electronic state [40(1)%; L. P. Dempsey, T. D. Sechler, C. Murray, and M. I. Lester, J. Phys. Chem. A 113, 6851 (2009)]. Quenching of OH A (2)Σ(+) by CO also yields H + CO(2) reaction products [26(5)%]; however, OH X (2)Π (v(") = 0,1) products from nonreactive quenching are not observed. Theoretical studies characterize the properties of energy minimized conical intersections in four regions of strong nonadiabatic coupling accessible from the OH A (2)Σ(+) + CO asymptote. Three of these regions have the O-side of OH pointing toward CO, which lead to atomic H and vibrationally excited CO(2) products and∕or nonreactive quenching. In the fourth region, energy minimized points are located on a seam of conical intersection from the OH A (2)Σ(+) + CO asymptote to an energy minimized crossing with an extended OH bond length and the H-side of OH pointing toward CO in a bent configuration. This region, exoergic with respect to the reaction asymptote, is likely to be the origin of the dominant O + HCO product channel.     

Experimental characterization of the CN X 2Σ+ + Ar and H2 potentials via infrared-ultraviolet double resonance spectroscopy

The hindered internal rotor states (n(K) = 0(0), 1(1), and 1(0)) of the CN-Ar complex with two quanta of CN stretch (v(CN) = 2), along with its ground state (v(CN) = 0), have been characterized by IR-UV double resonance and UV spectroscopy. Analysis of rotationally structured bands enable n(K) assignments and reveal perturbations due to Coriolis coupling between two closely spaced hindered rotor states, n(K) = 1(1) and 1(0). A deperturbation analysis is carried out to derive accurate rotational constants and their associated CN center-of-mass to Ar bond lengths as well as the magnitude of the coupling. The energetic ordering and spacings of the CN-Ar hindered rotor states provide a direct experimental probe of the angular dependence of the CN X (2)Σ(+) + Ar potential and permit radially averaged anisotropy parameters (V(10) = 5.2 cm(-1) and V(20) = 3.2 cm(-1)) to be determined. This analysis indicates a relatively flat potential about a linear N≡C-Ar configuration with a barrier to CN internal rotation of only ~12 cm(-1). The angular potentials determined from experiment and ab initio theory are in good accord, although theory predicts a higher barrier to CN internal rotation. A similar approach yields the infrared spectrum of H(2)-CN in the CN overtone region, which exhibits a rotationally resolved Σ ← Σ parallel band that is consistent with theoretical predictions for ortho-H(2)-CN.     

Matrix Infrared Spectroscopy and Quantum‐Chemical Calculations for the Coinage‐Metal Fluorides: Comparisons of Ar?AuF,Ne?AuF,and Molecules MF2 and MF3

The reactions of laser‐ablated Au, Ag, and Cu atoms with F₂ in excess argon and neon gave new absorptions in the M? F stretching region of their IR spectra, which were assigned to metal‐fluoride species. For gold, a Ng? AuF bond was identified in mixed neon/argon samples. However, this bonding was much weaker with AgF and CuF. Molecules MF₂ and MF₃ (M=Au, Ag, Cu) were identified from the isotopic distribution of the Cu and Ag atoms, comparison of the frequencies for three metal fluorides, and theoretical frequency calculations. The AuF₅ molecule was characterized by its strongest stretching mode and theoretical frequency calculations. Additional evidence was observed for the formation of the Au₂F₆ molecule.