Cotunnite-Structured Titanium Dioxide and the Hardest known Oxide

Combined theoretical and experimental investigations led to the discovery of a new polymorph of titanium dioxide with titanium nine-coordinated to oxygen in the cotunnite (PbCl 2 ) structure. Hardness measurements on the cotunnite-structured TiO 2 synthesized at pressures above 60 GPa and temperatures above 1000 K reveal that this material is the hardest oxide yet discovered. Furthermore, it is one of the least compressible (with a measured bulk modulus of 431 GPa) and hardest (with a microhardness of 38 GPa) polycrystalline materials studied thus far.     

One way functions and pseudorandom generators

Pseudorandom generators transform in polynomial time a short random “seed” into a long “pseudorandom” string. This string cannot be random in the classical sense of [6], but testing that requires an unrealistic amount of time (say, exhaustive search for the seed). Such pseudorandom generators were first discovered in [2] assuming that the function (a ^x modb) is one-way, i.e., easy to compute, but hard to invert on a noticeable fraction of instances. In [12] this assumption was generalized to the existence of any one-way permutation. The permutation requirement is sufficient but still very strong. It is unlikely to be proven necessary, unless something crucial, like P=NP, is discovered. Below, among other observations, a weaker assumption about one-way functions is proposed, which is not only sufficient, but also necessary for the existence of pseudorandom generators. Supported by NSF grant #DCR-8304498, DCR-8607492.     

X-ray diffraction by thermotropic main-chain polymers with side groups. II. semiflexible polyesters

Semiflexible thermotropic aromatic polyesters with lateral groups were aligned magnetically and mechanically in monodomains after separation into high-molecular-weight (polymer) and low-molecular-weight (oligomer) fractions. Based on the x-ray intensity distributions recorded for a series of seven different substituents in the arylsulfonyl substituted group, a novel smectic structure was determined for H, F, Cl, OCH₃, and CH₃ in the para position while a normal nematic alignment prevailed when it contained Br or NO₂.     

Survival of Virus Particles in Water Droplets: Hydrophobic Forces and Landauer’s Principle

Many small biological objects, such as viruses, survive in a water environment and cannot remain active in dry air without condensation of water vapor. From a physical point of view, these objects belong to the mesoscale, where small thermal fluctuations with the characteristic kinetic energy of k_BT (where k_B is the Boltzmann’s constant and T is the absolute temperature) play a significant role. The self-assembly of viruses, including protein folding and the formation of a protein capsid and lipid bilayer membrane, is controlled by hydrophobic forces (i.e., the repulsing forces between hydrophobic particles and regions of molecules) in a water environment. Hydrophobic forces are entropic, and they are driven by a system’s tendency to attain the maximum disordered state. On the other hand, in information systems, entropic forces are responsible for erasing information, if the energy barrier between two states of a switch is on the order of k_BT, which is referred to as Landauer’s principle. We treated hydrophobic interactions responsible for the self-assembly of viruses as an information-processing mechanism. We further showed a similarity of these submicron-scale processes with the self-assembly in colloidal crystals, droplet clusters, and liquid marbles.     

Quasi-steady deformation of a two-dimensional bubble placed within a potential viscous flow

The shape evolution of a two-dimensional bubble, bounded by a simple closed curve, which is initially placed within a potential viscous flow, is analysed. It is assumed that the influence of gravity and inertia forces is negligible, so the quasi-steady approximation can be applied. Reformulating the problem for Stokes equations with relevant boundary conditions at the free surface in terms of the bianalytic stress-stream function, and using the time-dependent conformal mappingz(,t) of a unit disk onto an unbounded flow domain sought, an infinite system of ordinary differential equations for the Laurent coefficients ofz(,t) is derived. A class of exact solutions is found for the case when the principal part of the complex velocity of the dominant flow at infinity is a polynomial, and the problem of formation of a pointed bubble is discussed.

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Sommario E analizzata l'evoluzione di una bolla bi-dimensionale, limitata da una curva chiusa semplice, inizialmente posta in un flusso potenziale viscoso. Si assume che l'influenza della gravità e delle forze inerziali sia trascurabile, cosicchè si può applicare l'approssimazione quasi-stazionaria. Riformulando il problema per le equazioni di Stokes con le opportune condizionial contorno sulla superficie libera in termini della funzione stress-stream bianalitica, e usando la tecnica delle trasformazioni conformi dipendenti dal tempoz(,t) di un disco unitario su un dominio di flusso non limitato incognito, viene derivato un sistema infinito di equazioni differenziali ordinarie per i coefficienti di Laurent diz(,t). Viene trovata una classe di soluzioni esatte per il caso in cui la parte principale della velocità complessa del flusso dominante all'infinito è una polinomiale, ed è discusso il problema della formazione di una bolla lenticolare.

     

Formic and acetic acids in a nitrogen matrix: Enhanced stability of the higher-energy conformer

Formic acid (HCOOH, FA) and acetic acid (CH(3)COOH, AA) are studied in a nitrogen matrix. The infrared (IR) spectra of cis and trans conformers of these carboxylic acids (and also of the HCOOD isotopologue of FA) are reported and analyzed. The higher-energy cis conformer of these molecules is produced by narrowband near-IR excitation of the more stable trans conformer, and the cis-to-trans tunneling decay is evaluated spectroscopically. The tunneling process in both molecules is found to be substantially slower in a nitrogen matrix than in rare-gas matrices, the cis-form decay constants being approximately 55 and 600 times smaller in a nitrogen matrix than in an argon matrix, for FA and AA respectively. The stabilization of the higher-energy cis conformer is discussed in terms of specific interactions with nitrogen molecule binding with the OH group of the carboxylic acid. This model is in agreement with the observed differences in the IR spectra in nitrogen and argon matrices, in particular, the relative frequencies of the νOH and τCOH modes and the relative intensities of the νOH and νC=O bands.     

Site-directed mutagenesis combined with oxidative methionine labeling for probing structural transitions of a membrane protein by mass spectrometry

Exposure of the membrane protein bacteriorhodopsin (BR) to SDS induces partial breakdown of the native conformation. The exact structural properties of this SDS state remain a matter of debate, despite its widespread use in BR folding experiments. The current work employs hydroxyl radical (·OH) labeling in conjunction with mass spectrometry (MS)-based peptide mapping for probing the solvent accessibility of individual BR segments in the presence of SDS. Previous work revealed methionine sulfoxide formation to be the dominant oxidative pathway. Those data suggested extensive unfolding of helices A and D in SDS. Unfortunately, the lack of Met residues in helices C and F implies that no direct information on the behavior of the latter two elements could be obtained. Here, we address this problem by employing two variants with additional Met residues, L93M (helix C) and V179M (helix F). The oxidation behavior of the resulting 11 methionines can be grouped into three categories: (1) extensively labeled both in native BR and in SDS (loop residues M32, M68, and M163); (2) protected in the native state but not in SDS (M20, M118); (3) always protected (M56, M60, M93, M145, M179, M209). These data show that a solvent-inaccessible core is retained in SDS. This core consists of partially intact helices B, C, E, F, and G. The termini of these helices are highly dynamic and/or unraveled, particularly on the cytoplasmic side. Overall, this work demonstrates how the use of engineered ·OH labeling sites can provide insights into structural properties of membrane proteins.     

Towards the Accurate Calculation of 183W NMR Chemical Shifts in Polyoxometalates: The Relevance of the Structure

DFT calculations were carried out to study ¹⁸³W NMR chemical shifts in the family of the Keggin anions with formula α‐[XW₁₂O₄₀]^q? (X=B, Al, Si, P, Ga, Ge, As, Zn), in the β‐ and γ‐[SiW₁₂O₄₀]^4? geometric isomers, in the derivative Dawson anion [P₂W₁₈O₆₂]^6?, and in the most symmetrical Lindqvist [W₆O₁₉]^2? anion and its derivative [W₁₀O₃₂]^4?. In this article, we show that the geometry employed in the calculation of NMR chemical shifts in polyoxotungstates is extremely important if we want to be quantitative. Using very large basis sets of QZ4P quality and taking into account the conductor‐like screening model (COSMO) to account for solvent effects (aqueous and organic solutions), good geometries were found for the polyoxoanions. From these optimal geometries the ¹⁸³W NMR chemical shifts were computed with the more standard basis sets of TZP quality and including spin–orbit corrections inside the zero‐order regular approximation (ZORA) to describe the relativistic effects of the internal electrons. With this strategy the mean absolute error between experimental and theoretical values was found to be less than 10 ppm, which is similar to the experimental error. We also discuss how the geometry of the polyoxoanion influences on the shielding.     

A critical look at the definition of multidimensional separations

Multidimensional (MD) separations, especially comprehensive two-dimensional (2D) separations such as comprehensive 2D LC (LC × LC), and comprehensive 2D GC (GC × GC), are potentially powerful separation techniques. It is important to have a clear definition of MD techniques to better understand the scope and boundaries of the subject. Widely accepted definitions of MD Separations have their roots in the definition proposed by Giddings. Giddings also added several comments that clarified the scope of his definition. However, some researchers extend Giddings’ definitions beyond their intended scope. Doing so disqualifies such comprehensive 2D techniques as LC × LC, GC × GC and 2D TLC from being considered as 2D techniques. In other instances, extended treatment of Giddings’ definition is used as a basis to justify design-parameters of comprehensive 2D separations despite the fact that these parameters lead to sub-optimal implementations. We believe that the shortcomings in the definition and its popular interpretations are serious enough to warrant attention, especially by those interested in designing optimal instrumentation for MD separations like comprehensive 2D GC. After discussion of the weaknesses in the currently used definitions, we propose to define n-dimensional analysis as one that generates n-dimensional displacement information. We believe that this definition captures the spirit of Giddings’ definition while avoiding the problems associated with its popular interpretations.