Template-directed DNA photoligation via alpha-5-cyanovinyldeoxyuridine

[reaction: see text] We describe an efficient template-directed photoligation of oligodeoxynucleotides (ODNs) using alpha-5-cyanovinyldeoxyuridine (alpha(C)U). An efficient photoligation was produced by photoirradiation of an ODN containing alpha(C)U at the 3' end with an ODN containing thymine at the 5' end in the presence of a template ODN. This photoligation method is a new and efficient way to synthesize branched ODNs.     

Presence of peroxyradicals in cigarette smoke and the scavenging effect of shikonin, a naphthoquinone pigment

Using a new method having been developed for the purpose of quantitative determination for peroxyradicals, the presence of peroxyradicals was proved in cigarette smoke. In brief, peroxyradicals in cigarette smoke were measured by ESR spectrometry coupled to non-reductive scavenging of 1,1-diphenyl-2-picrylhydrazyl (DPPH). As a result, peroxyradicals were found to be major reactive oxygen species (ROS) since the concentration of peroxyradicals recovered from cigarette smoke was much higher than that of any of other ROS (superoxide and hydroxyl radical) and nitric oxide. Furthermore, several antioxidants (ascorbic acid, reduced glutathione, epigallocatechin gallate, shikonin) were examined for scavenging activity against peroxyradicals in the cigarette smoke. Among them shikonin alone exerted the scavenging activity, suggesting that shikonin is promising antioxidant for cigarette filters because of its effectiveness against broad range of ROS including peroxyradicals, heat resistance, nonvolatility and high affinity to the filter.     

Convergent synthesis of polycyclic ethers via the intramolecular allylation of alpha-acetoxy ethers and subsequent ring-closing metathesis

The Lewis acid mediated reaction of alpha-acetoxy ethers 15-22 gave the corresponding cyclized products 23, 25, 27, 29, 31, 32, 34, and 36 in good yields with high stereoselectivities. Those cyclized products were subjected to ring-closing metathesis to afford the polycyclic ethers 38-42, 44, and 45 in good yields. The usefulness of the present methodology was demonstrated by the convergent synthesis of the CDEF ring system of brevetoxin B (1) and the CDEFG ring system of gambierol (2).     

Oxytelluration of olefins to (β-alkoxy- and β-hydroxy-alkyl)aryltellurium dihalides and their reactions with reducing agents and aqueous NaOH

Treatment of olefinic hydrocarbons with phenyltellurium tribromide or a mixture of diphenylditelluride and bromine in alcohol affords (β-alkoxyalkyl)phenyltellurium dibromides in fair to good yield (alkoxytelluration of olefins). Various aryltellurium trichlorides, diphenylditelluride/CuCl₂, and phenyltellurocyanate/CuCl₂ can be used for the preparation of (β-alkoxyalkyl)aryltellurium dichlorides. Similar reactions in aqueous tetrahydrofuran or aqueous t-butyl alcohol result in the formation of the corresponding β-hydroxy compound (hydroxytelluration of olefins). The reaction is trans stereospecific in the cases of cis-2-butene and cis- and trans-4-octenes and regiospecific in the cases of all terminal olefins examined (1-hexene, 1-octene, 1-decene, styrene, α-methylstyrene, 2-methyl-1-pentene, and isobutylene), tellurium species attacking the terminal carbon solely. The diorganyltellurium dihalide produced is reduced to the corresponding diorganyltelluride by reducing agents such as N₂H₄, Na₂S, Na₂S₂O₃, and NaHSO₄ in aqueous solution. Treatment of the diorganyltellurium dibromide with aqueous NaOH affords either an allylic ether (by telluroxide elimination) or a telluroxide depending on the structure of the telluroxide.     

Small-angle x-ray scattering from solution of rodlike particles with length distribution

The scattering function of rods with a constant radius, 8 Å, and a length distribution of the Schulz–Zimm type was calculated on a computer as a model of helical synthetic polypeptide. The influence of length and length distribution on the scattered intensity of small-angle x-ray scattering was clarified. As length grows and length distribution broadens it is difficult to obtain reliable values of molecular weight and radius of gyration from a Zimm plot. The influence of length distribution on the mass per unit length, M_q, and the radius of gyration of the cross section, 〈S〉^1/2, from the Guinier plot of the cross-sectional factor decreases as the length increases, and reliable values of M_q and 〈S〉^1/2 can be obtained even for rods with wide distribution for rods more than 600 Å long. In particular, it is pointed out that the value of 〈S〉^1/2 is little influenced by length and length distribution.     

Cationic polymerization of p-methylstyrene initiated by acetyl perchlorate: An approach to living polymerization

The cationic polymerization of p-methylstyrene initiated by acetyl perchlorate at ?78°C led to long-lived (living-like) polymers with a narrow molecular weight distribution (M?_w/M?_n = 1.1–1.4) in methylene chloride containing a common ion salt (n-Bu₄NClO₄) or in a less polar solvent (CH₂Cl₂/toluene, 1/4v/v). Under these conditions, the number-average molecular weight (M?_n) of the polymers increased in proportion to monomer conversion and was regulated by the monomer-to-initiator ratio. When fresh feeds of the monomer were repeatedly added to a completely polymerized solution, the polymerization ensued at the same rate as before and the linear increase in M?_n with monomer conversion continued. The effects of solvent polarity and the common ion salt on the polymerization showed the suppression of the ionic dissociation of the propagating species, resulting in a “nondissociated species,” to be the key factor for the formation of the long-lived polymers.     

Correlation between oxygen consumption and photobleaching during in vitro photodynamic treatment with ATX-S10.Na(II) using pulsed light excitation: dependence of pulse repetition rate and irradiation time

We revealed that in ATX-S10.Na(II)(13,17-bis (1-carboxypropionyl) carbamoylethyl-8-etheny-2-hydroxy-3-hydroxyiminoethylidene-2,7,12,18-tetraethyl porphyrin sodium)-mediated photodynamic therapy using 667 nm nanosecond-pulsed light excitation at a peak intensity of 2.0 MW/cm(2), phototoxicity increased with decreasing pulse repetition rate in the range of 5-30 Hz for A549 cell cultures. To examine the relation between the reaction mechanism and measured phototoxicity, we carefully measured the kinetics of photochemical oxygen consumption and photobleaching during irradiation of ATX-S10.Na(II)-sensitized A549 monolayer cultures. Measurements of oxygen consumption with a microelectrode, which was performed just above the cells, showed that there was no significant difference between the magnitudes of decrease in oxygen at the three repetition rates at the same cumulative fluence. Loss of ATX-S10.Na(II) fluorescence intensity also exhibited little repetition rate dependence when compared at the same cumulative fluence. We investigated the correlation between oxygen consumption and photobleaching during irradiation and obtained "fluorescence-oxygen diagrams." The diagrams showed dynamic changes between oxygen-dependent and oxygen-independent photobleaching at the higher repetition rates of 10 and 30 Hz, whereas such change was not clearly seen over the whole irradiation time at 5 Hz. These results suggest that the reduced phototoxicity at high repetition rates might be due to an oxygen-independent reaction. We presumed that the change in the reaction mechanism was associated with the local concentrations of the photosensitizer and oxygen in cells during irradiation.     

Appearance of pure fluorocarbon micelles surveyed by fluorescence quenching of amphiphilic quinoline derivatives in fluorocarbon and hydrocarbon surfactant mixtures

A halide-sensitive fluorescence probe was utilized to evaluate the miscibility of fluorocarbon and hydrocarbon surfactants in aqueous micellar systems. The fluorescence of 6-methoxy-N-1,1,2,2-tetrahydroheptadecafluorodecylquinolinium chloride, FC10MQ, was quenched by halide ions dissociated from the surfactant. The fluorescence in micellar solutions showed an initially rapid decay. This suggests that halide ions effectively quench FC10MQ fluorescence at the micellar surface. The subsequent slow decay corresponds to the quenching of FC10MQ fluorescence in the aqueous bulk phase by the free counterions. The Stern-Volmer plots for fluorescence quenching gave a distinct break at the critical micelle concentration of the cationic surfactants. The abrupt increase in fluorescence quenching is attributed to the solubilization of the probe in the micelles. The fluorescence quenching behavior provides direct information about the immiscibility of fluorocarbon and hydrocarbon species in micelles, and the results indicate that almost pure fluorocarbon micelles appear in surfactants mixtures.     

Synthesis of Star-Shaped Polymers via Coordination of Bipyridyl-Terminated Polyoxyethylene with Metal Ions

Abstract

This paper describes the synthesis of various star-shaped polymers by means of complexation of bipyridyl-terminated polyoxyethylene with Ru(II) ion. Three kinds of bipyridyl-terminated polyoxyethylenes of different molecular weights were prepared from the corresponding polyoxyethylene monomethyl ethers with narrow molecular weight distributions. Bipyridyl was found to be introduced quantitatively at the end of the polymers based on the results of UV spectra. The formation of a star-shaped polymer was carried out by the reaction of RuCl₃ with three equivalents of bipyridyl-terminated polyoxyethylene. The UV spectrum of the star-shaped polymer obtained supported the formation of a typical Ru(II) tris(bipyridyl) complex. From the results of GPC, the star-shaped polymer obtained had a higher molecular weight than the pre-polymer and showed a narrow molecular weight distribution. In the case of a Ni(II) or a Co(II) complex, however, the star-shaped polymer was found to be dissociated into three linear prepolymers under the conditions of GPC measurement.